Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 2.6e-214 748.4 381 100.0
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 7.0e-106 388.3 346 59.5
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 3.5e-105 386.0 346 59.2
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 5.9e-105 385.2 308 63.6
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 6.5e-104 381.7 307 65.1
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 2.5e-103 379.8 307 65.1
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 2.7e-102 376.3 308 62.3
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 6.1e-102 375.2 341 57.5
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 1.0e-101 374.4 347 57.6
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 2.0e-100 370.2 315 62.2
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 1.3e-99 367.5 315 61.6
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 1.7e-99 367.1 316 60.4
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 4.8e-99 365.5 341 57.2
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 6.3e-99 365.2 349 55.6
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 2.4e-98 363.2 308 60.4
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 9.1e-98 361.3 315 58.1
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 3.5e-97 359.4 346 56.4
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 3.5e-97 359.4 341 54.5
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 4.5e-97 359.0 341 55.1
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 1.0e-96 357.8 315 58.4
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 1.0e-96 357.8 341 56.0
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 2.9e-96 356.3 353 53.5
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 2.1e-94 350.1 316 55.1
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 2.1e-94 350.1 308 57.8
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 2.1e-94 350.1 315 59.0
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 2.1e-94 350.1 315 55.2
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 6.1e-94 348.6 315 57.1
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.4e-93 347.4 342 53.2
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 1.4e-93 347.4 307 59.9
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 1.8e-93 347.1 315 57.1
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 8.8e-93 344.7 342 52.9
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 1.2e-92 344.4 315 54.6
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 2.0e-92 343.6 346 52.0
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 2.6e-92 343.2 347 53.0
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 3.4e-92 342.8 342 52.3
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 9.7e-92 341.3 342 52.0
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.3e-91 340.9 342 52.3
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 1.3e-91 340.9 315 56.5
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 1.3e-91 340.9 311 58.5
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 1.3e-91 340.9 315 56.5
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 1.7e-91 340.5 316 58.2
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 4.5e-89 332.4 310 54.8
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 2.2e-88 330.1 346 50.3
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 2.5e-87 326.6 308 55.5
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 1.2e-86 324.3 307 54.1
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 3.6e-86 322.8 315 53.3
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 6.1e-86 322.0 315 54.0
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 8.8e-85 318.2 308 52.3
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 8.8e-85 318.2 309 54.0
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 1.5e-84 317.4 308 52.6
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 2.6e-84 316.6 308 51.9
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 1.3e-83 314.3 347 48.1
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 4.8e-83 312.4 315 51.1
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 4.8e-83 312.4 318 53.1
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.8e-82 310.5 341 50.1
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 5.4e-82 308.9 310 52.3
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 9.1e-82 308.1 347 49.0
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 2.7e-81 306.6 312 54.2
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 2.7e-81 306.6 325 50.2
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 4.5e-81 305.8 308 51.6
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 1.3e-80 304.3 308 51.3
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 2.9e-80 303.1 315 51.4
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 5.0e-80 302.4 309 51.5
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 1.1e-79 301.2 318 50.0
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 1.9e-79 300.4 312 52.9
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 7.2e-79 298.5 344 46.5
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 9.5e-79 298.1 308 52.9
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 1.2e-78 297.7 316 49.7
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 1.6e-78 297.4 308 51.0
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 3.0e-77 293.1 316 50.0
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 6.8e-77 292.0 328 50.6
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 2.0e-76 290.4 308 51.9
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 5.7e-76 288.9 309 50.8
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 6.3e-75 285.4 310 51.3
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 1.1e-74 284.6 320 47.2
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 1.4e-74 284.3 309 48.9
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 7.0e-74 282.0 341 44.3
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 1.6e-73 280.8 341 44.3
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 2.0e-73 280.4 341 45.5
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 5.9e-73 278.9 308 48.7
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 1.0e-72 278.1 314 48.4
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 1.7e-72 277.3 341 44.3
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 2.9e-72 276.6 312 49.7
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 2.9e-72 276.6 309 47.6
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 3.9e-72 276.2 313 50.8
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 5.0e-72 275.8 315 47.9
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 5.0e-72 275.8 314 48.1
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 6.6e-72 275.4 308 48.7
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 1.1e-71 274.6 336 45.8
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 1.2e-70 271.2 315 49.8
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 3.6e-70 269.6 308 49.4
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 6.1e-70 268.9 316 46.8
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 1.4e-69 267.7 314 48.1
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 6.8e-69 265.4 316 46.2
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 1.5e-68 264.2 316 44.6
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 4.4e-68 262.7 316 44.3
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 6.4e-67 258.8 335 43.6
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 6.4e-67 258.8 335 43.9
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 6.4e-67 258.8 335 43.9
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 8.3e-67 258.5 343 44.0
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 1.1e-66 258.1 316 48.1
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 9.2e-66 255.0 342 43.3
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 7.8e-65 251.9 308 43.8
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 3.9e-64 249.6 316 43.4
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.1e-63 248.1 315 43.5
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 1.4e-61 241.1 337 42.4
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 3.7e-59 233.0 250 48.4
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 2.4e-58 230.3 342 42.1
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 6.0e-57 225.7 221 52.0
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 1.1e-50 204.9 179 57.5
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 7.3e-47 192.2 229 45.9
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 1.1e-42 178.3 337 37.7
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 1.4e-34 151.4 307 36.2
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 1.3e-30 138.3 246 37.8
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 1.4e-29 134.8 128 57.8
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 6.0e-25 119.4 172 38.4
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 2.3e-24 117.5 179 42.5
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 1.1e-23 115.2 312 28.5
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 8.1e-22 109.0 321 28.3
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 2.6e-20 104.0 259 34.7
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 1.1e-18 98.6 256 27.3
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 5.1e-16 89.7 284 27.1
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 5.1e-16 89.7 284 27.1
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 6.7e-16 89.4 262 29.4
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 1.5e-15 88.2 268 25.0
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 1.6e-14 84.7 108 43.5
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 1.7e-11 74.7 88 53.4
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 8.7e-08 62.4 177 30.5
COL.COLO4_31086 Corchorus olitorius HOM05D002504 ORTHO05D007555 1.6e-06 58.2 62 45.2


User provided reference genes

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