Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007962001 Vitis vinifera HOM05D008369 ORTHO05D005932 2.4e-90 335.5 169 100.0
Ciclev10022335m.g Citrus clementina HOM05D008369 ORTHO05D005932 4.1e-18 95.5 159 39.6
TAR006G0004 Trochodendron aralioides HOM05D009095 ORTHO05D005932 4.1e-18 95.5 172 40.1
Dinv10658 Davidia involucrata HOM05D008369 ORTHO05D005932 7.8e-17 91.3 154 41.6
Thecc.03G094300 Theobroma cacao HOM05D008369 ORTHO05D005932 1.0e-16 90.9 152 40.8
Dinv34096 Davidia involucrata HOM05D009095 ORTHO05D005932 1.9e-15 86.7 158 40.5
CSS0001536 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 2.5e-15 86.3 165 40.6
Cfa019277 Carpinus fangiana HOM05D008369 ORTHO05D005932 2.5e-15 86.3 182 36.8
TAR622G0621 Trochodendron aralioides HOM05D034691 ORTHO05D005932 7.3e-15 84.7 146 40.4
Lalb_Chr12g0196981 Lupinus albus HOM05D008369 ORTHO05D005932 4.7e-14 82.0 176 36.4
Ciclev10032785m.g Citrus clementina HOM05D009095 ORTHO05D005932 6.2e-14 81.6 152 38.8
Ah.02g113780 Amaranthus hybridus HOM05D008369 ORTHO05D005932 1.1e-13 80.9 159 37.1
Dinv38746 Davidia involucrata HOM05D008369 ORTHO05D005932 4.0e-13 79.0 171 38.0
Actinidia04866 Actinidia chinensis HOM05D008369 ORTHO05D005932 1.2e-12 77.4 180 35.0
Manes.06G089401 Manihot esculenta HOM05D000041 ORTHO05D006140 1.2e-12 77.4 165 37.0
CSS0024821 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 5.8e-12 75.1 169 38.5
Rhsim08G0152100 Rhododendron simsii HOM05D008369 ORTHO05D005932 2.2e-11 73.2 166 34.3
Medtr4g108990 Medicago truncatula HOM05D008369 ORTHO05D005932 3.7e-11 72.4 179 32.4
Hund09825 Selenicereus undatus HOM05D008369 ORTHO05D005932 3.7e-11 72.4 161 34.8
Duzib084G1416 Durio zibethinus HOM05D008369 ORTHO05D005932 8.3e-11 71.2 157 38.9
Peaxi162Scf00408g00521 Petunia axillaris HOM05D020902 ORTHO05D005932 8.3e-11 71.2 108 38.9
GSVIVG01019947001 Vitis vinifera HOM05D009095 ORTHO05D005932 8.3e-11 71.2 166 38.6
arahy.Tifrunner.gnm1.ann1.G0M71R Arachis hypogaea HOM05D008369 ORTHO05D005932 2.4e-10 69.7 171 36.3
COL.COLO4_36949 Corchorus olitorius HOM05D008369 ORTHO05D005932 2.4e-10 69.7 153 35.3
TAR622G1347 Trochodendron aralioides HOM05D034691 ORTHO05D005932 2.4e-10 69.7 144 34.7
arahy.Tifrunner.gnm1.ann1.7B8RN4 Arachis hypogaea HOM05D008369 ORTHO05D005932 4.1e-10 68.9 172 36.0
PGSC0003DMG400002821 Solanum tuberosum HOM05D020902 ORTHO05D005932 5.4e-10 68.6 106 34.0
Migut.L01243 Erythranthe guttata HOM05D009095 ORTHO05D005932 1.2e-09 67.4 160 31.2
Haze_07652 Corylus avellana HOM05D008369 ORTHO05D005932 2.1e-09 66.6 160 35.6
Gohir.A11G032000 Gossypium hirsutum HOM05D008369 ORTHO05D005932 2.1e-09 66.6 157 35.7
Sc12g0006540 Simmondsia chinensis HOM05D008369 ORTHO05D005932 2.7e-09 66.2 152 33.6
DCAR_026037 Daucus carota HOM05D008369 ORTHO05D005932 4.6e-09 65.5 144 32.6
Solyc04g005555.1 Solanum lycopersicum HOM05D020902 ORTHO05D005932 4.6e-09 65.5 106 33.0
CiPaw.06G088700 Carya illinoinensis HOM05D009095 ORTHO05D005932 1.0e-08 64.3 170 36.5
Prupe.5G198500 Prunus persica HOM05D008369 ORTHO05D005932 1.7e-08 63.5 176 33.5
MBI16_g25840_MAGBIO Magnolia biondii HOM05D036885 ORTHO05D034247 2.3e-08 63.2 164 33.5
QL10p017723 Quercus lobata HOM05D008369 ORTHO05D005932 2.3e-08 63.2 187 29.4
Gohir.D11G035400 Gossypium hirsutum HOM05D008369 ORTHO05D005932 3.0e-08 62.8 157 34.4
Sed0006867 Sechium edule HOM05D008369 ORTHO05D005932 3.0e-08 62.8 179 30.7
Sopen04g001590 Solanum pennellii HOM05D020902 ORTHO05D005932 3.0e-08 62.8 106 32.1
FAN18G3211 Fragaria x ananassa HOM05D008369 ORTHO05D005932 5.1e-08 62.0 161 33.5
Nn3g17332 Nelumbo nucifera HOM05D009095 ORTHO05D005932 5.1e-08 62.0 171 34.5
ClCG09G021960 Citrullus lanatus HOM05D029799 ORTHO05D005932 6.6e-08 61.6 161 34.2
vmacro01343 Vaccinium macrocarpon HOM05D009095 ORTHO05D005932 8.6e-08 61.2 154 37.7
MD14G1205100 Malus domestica HOM05D008369 ORTHO05D005932 1.1e-07 60.8 178 32.0
HanXRQChr05g0155031 Helianthus annuus HOM05D008369 ORTHO05D011941 1.5e-07 60.5 151 36.4
Cc11_g12580 Coffea canephora HOM05D020902 ORTHO05D005932 1.9e-07 60.1 135 36.3
Phvul.003G188100 Phaseolus vulgaris HOM05D008369 ORTHO05D005932 2.5e-07 59.7 154 31.8
Migut.D01759 Erythranthe guttata HOM05D012087 ORTHO05D005932 3.3e-07 59.3 181 34.8
Gohir.A12G179000 Gossypium hirsutum HOM05D008369 ORTHO05D005932 3.3e-07 59.3 148 34.5
Gohir.D12G181600 Gossypium hirsutum HOM05D008369 ORTHO05D005932 3.3e-07 59.3 145 35.2
Peaxi162Scf00187g01112 Petunia axillaris HOM05D020902 ORTHO05D005932 3.3e-07 59.3 135 33.3
MD06G1197700 Malus domestica HOM05D008369 ORTHO05D005932 4.3e-07 58.9 179 33.0
RcHm_v2.0_Chr7g0182121 Rosa chinensis HOM05D008369 ORTHO05D005932 5.6e-07 58.5 167 32.3
Carub.0006s0669 Capsella rubella HOM05D010063 ORTHO05D011941 7.3e-07 58.2 100 41.0
Hund02625 Selenicereus undatus HOM05D008369 ORTHO05D005932 7.3e-07 58.2 169 30.8
AL6G18100 Arabidopsis lyrata HOM05D010063 ORTHO05D011941 9.5e-07 57.8 100 40.0
Gorai.007G038200 Gossypium raimondii HOM05D008369 ORTHO05D005932 9.5e-07 57.8 156 32.7
Gorai.008G194900 Gossypium raimondii HOM05D008369 ORTHO05D005932 9.5e-07 57.8 143 35.0
Lsat_1_v5_gn_1_14361 Lactuca sativa HOM05D008369 ORTHO05D005932 1.6e-06 57.0 152 34.2
CARHR205420 Cardamine hirsuta HOM05D010063 ORTHO05D011941 2.1e-06 56.6 103 37.9
Lj4g0010683 Lotus japonicus HOM05D008369 ORTHO05D005932 2.1e-06 56.6 165 30.3
TPR.G2001 Trifolium pratense HOM05D008369 ORTHO05D005932 2.1e-06 56.6 180 32.2
Psat4g049480 Pisum sativum HOM05D008369 ORTHO05D005932 3.6e-06 55.8 190 28.4
DCAR_016580 Daucus carota HOM05D008369 ORTHO05D005932 4.7e-06 55.5 152 32.2
Nn4g23279 Nelumbo nucifera HOM05D034691 ORTHO05D005932 4.7e-06 55.5 166 29.5
Thecc.02G339500 Theobroma cacao HOM05D009095 ORTHO05D005932 4.7e-06 55.5 167 31.7
MSTRG.11371 Avicennia marina HOM05D012087 ORTHO05D005932 8.1e-06 54.7 107 39.3
Cc00_g25850 Coffea canephora HOM05D012087 ORTHO05D005932 8.1e-06 54.7 202 28.7


User provided reference genes

Program Settings