Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007952001 Vitis vinifera HOM05D007878 ORTHO05D010022 7.1e-215 750.7 509 100.0
TAR374G1173 Trochodendron aralioides HOM05D007878 ORTHO05D010022 1.5e-87 327.8 475 49.1
Dinv38757 Davidia involucrata HOM05D007878 ORTHO05D010022 1.6e-86 324.3 480 59.4
Thecc.03G095300 Theobroma cacao HOM05D007878 ORTHO05D010022 1.1e-82 311.6 480 58.1
CiPaw.11G048800 Carya illinoinensis HOM05D007878 ORTHO05D010022 7.2e-82 308.9 478 51.0
Potri.015G061500 Populus trichocarpa HOM05D007878 ORTHO05D010022 1.2e-81 308.1 483 45.3
Prupe.5G199300 Prunus persica HOM05D007878 ORTHO05D010022 6.7e-80 302.4 495 47.1
Manes.14G082500 Manihot esculenta HOM05D007878 ORTHO05D010022 1.7e-78 297.7 484 56.2
PGR083G0831 Punica granatum HOM05D007878 ORTHO05D010022 2.4e-77 293.9 484 56.4
Eucgr.B00555 Eucalyptus grandis HOM05D007878 ORTHO05D010022 1.2e-76 291.6 484 54.3
RcHm_v2.0_Chr7g0182231 Rosa chinensis HOM05D007878 ORTHO05D010022 2.6e-76 290.4 490 49.6
Duzib084G0698 Durio zibethinus HOM05D007878 ORTHO05D010022 7.7e-76 288.9 478 45.0
FAN08G0929 Fragaria x ananassa HOM05D007878 ORTHO05D010022 3.8e-75 286.6 460 44.3
FAN13G2185 Fragaria x ananassa HOM05D007878 ORTHO05D010022 9.4e-74 282.0 493 42.8
Atru.chr9.783 Acer truncatum HOM05D007878 ORTHO05D010022 1.6e-73 281.2 477 43.0
Nn4g23313 Nelumbo nucifera HOM05D007878 ORTHO05D010022 2.1e-73 280.8 477 44.9
Actinidia04859 Actinidia chinensis HOM05D007878 ORTHO05D010022 1.3e-70 271.6 483 43.3
MD14G1206000 Malus domestica HOM05D007878 ORTHO05D010022 2.2e-70 270.8 459 51.6
Aqoxy3G03537 Aquilegia oxysepala HOM05D007878 ORTHO05D010022 3.7e-70 270.0 487 47.6
FAN18G1316 Fragaria x ananassa HOM05D007878 ORTHO05D010022 4.8e-70 269.6 496 42.5
Cfa019282 Carpinus fangiana HOM05D007878 ORTHO05D010022 4.7e-65 253.1 476 41.2
Manes.06G088500 Manihot esculenta HOM05D007878 ORTHO05D010022 2.0e-63 247.7 477 52.6
Actinidia09234 Actinidia chinensis HOM05D007878 ORTHO05D010022 4.4e-63 246.5 481 40.7
FvH4_5g14430 Fragaria vesca HOM05D007878 ORTHO05D010022 2.8e-62 243.8 496 42.7
Cc04_g14870 Coffea canephora HOM05D007878 ORTHO05D010022 3.7e-62 243.4 489 38.2
Nitab4.5_0001211g0090 Nicotiana tabacum HOM05D007878 ORTHO05D010022 1.8e-61 241.1 477 50.7
QL10p018347 Quercus lobata HOM05D007878 ORTHO05D010022 1.2e-60 238.4 405 54.8
COL.COLO4_38427 Corchorus olitorius HOM05D007878 ORTHO05D010022 5.9e-60 236.1 478 51.3
CiPaw.11G048500 Carya illinoinensis HOM05D007878 ORTHO05D010022 1.7e-59 234.6 470 41.1
Sed0013205 Sechium edule HOM05D007878 ORTHO05D010022 4.2e-58 229.9 476 44.5
Nitab4.5_0002756g0040 Nicotiana tabacum HOM05D007878 ORTHO05D010022 4.0e-56 223.4 477 49.7
Peaxi162Scf00274g00029 Petunia axillaris HOM05D007878 ORTHO05D010022 6.3e-54 216.1 478 45.4
Gohir.A03G068300 Gossypium hirsutum HOM05D007878 ORTHO05D010022 2.4e-53 214.2 478 36.2
Gorai.003G099100 Gossypium raimondii HOM05D007878 ORTHO05D010022 2.4e-53 214.2 479 36.7
Gohir.D03G094900 Gossypium hirsutum HOM05D007878 ORTHO05D010022 9.1e-53 212.2 478 36.2
MBI16_g14990_MAGBIO Magnolia biondii HOM05D007878 ORTHO05D010022 1.6e-52 211.5 476 38.9
TWI60G1109 Tripterygium wilfordii HOM05D007878 ORTHO05D010022 1.6e-52 211.5 483 43.7
Oeu031812.2 Olea europaea HOM05D007878 ORTHO05D010022 3.5e-52 210.3 478 42.3
Haze_07666 Corylus avellana HOM05D007878 ORTHO05D010022 2.5e-50 204.1 447 37.6
Ciclev10024608m.g Citrus clementina HOM05D007878 ORTHO05D010022 9.4e-50 202.2 473 36.2
ClCG06G015920 Citrullus lanatus HOM05D007878 ORTHO05D010022 6.1e-49 199.5 480 38.1
DCAR_016585 Daucus carota HOM05D007878 ORTHO05D010022 5.2e-48 196.4 477 33.8
Nn3g17364 Nelumbo nucifera HOM05D007878 ORTHO05D010022 9.8e-47 192.2 323 50.5
PGSC0003DMG400024662 Solanum tuberosum HOM05D007878 ORTHO05D010022 2.9e-43 180.6 478 40.4
Phvul.003G187300 Phaseolus vulgaris HOM05D007878 ORTHO05D010022 6.6e-43 179.5 475 33.9
CAN.G479.49 Capsicum annuum HOM05D007878 ORTHO05D010022 3.3e-42 177.2 477 37.1
PSO063G3897 Papaver somniferum HOM05D007878 ORTHO05D010022 4.2e-42 176.8 483 31.5
Oeu046990.1 Olea europaea HOM05D007878 ORTHO05D010022 2.8e-41 174.1 478 45.0
Solyc03g115620.2 Solanum lycopersicum HOM05D007878 ORTHO05D010022 3.6e-41 173.7 479 40.7
Sopen03g034610 Solanum pennellii HOM05D007878 ORTHO05D010022 1.0e-40 172.2 479 38.2
Oeu052465.1 Olea europaea HOM05D007878 ORTHO05D010022 2.0e-39 167.9 479 39.9
Oeu052466.1 Olea europaea HOM05D007878 ORTHO05D010022 2.0e-39 167.9 479 39.9
Glyma.17G103300 Glycine max HOM05D007878 ORTHO05D010022 4.9e-38 163.3 476 34.0
Cpa.g.sc13.307 Carica papaya HOM05D007878 ORTHO05D010022 8.3e-38 162.5 476 37.2
MELO3C017199.2 Cucumis melo HOM05D007878 ORTHO05D010022 2.7e-36 157.5 482 34.2
Ca_21797_v3 Cicer arietinum L. HOM05D007878 ORTHO05D010022 3.5e-36 157.1 473 33.4
CANSAT80G1712 Cannabis sativa HOM05D007878 ORTHO05D010022 7.8e-36 156.0 483 32.7
Medtr4g109150 Medicago truncatula HOM05D007878 ORTHO05D010022 1.3e-35 155.2 493 32.0
CsaV3_1G002630 Cucumis sativus L. HOM05D007878 ORTHO05D010022 1.1e-34 152.1 481 33.9
MD06G1198500 Malus domestica HOM05D007878 ORTHO05D010022 1.5e-34 151.8 461 37.3
Lj4g0012809 Lotus japonicus HOM05D007878 ORTHO05D010022 8.0e-33 146.0 478 31.8
ATR0730G174 Amborella trichopoda HOM05D007878 ORTHO05D010022 3.4e-31 140.6 485 43.1
TPR.G1999 Trifolium pratense HOM05D007878 ORTHO05D010022 9.8e-31 139.0 475 43.2
CSS0029238 Camellia sinensis var. sinensis HOM05D000957 ORTHO05D000754 2.2e-30 137.9 438 34.0
Oeu047269.3 Olea europaea HOM05D007878 ORTHO05D010022 2.9e-30 137.5 445 34.8
HanXRQChr05g0157141 Helianthus annuus HOM05D007878 ORTHO05D010022 1.1e-29 135.6 220 43.2
DCAR_026030 Daucus carota HOM05D000094 ORTHO05D003883 3.0e-27 127.5 197 44.2
ECA246G4297 Erigeron canadensis HOM05D007878 ORTHO05D010022 5.2e-24 116.7 416 31.2
arahy.Tifrunner.gnm1.ann1.3W98EY Arachis hypogaea HOM05D007878 ORTHO05D010022 2.2e-22 111.3 472 29.4
arahy.Tifrunner.gnm1.ann1.QT4JJ4 Arachis hypogaea HOM05D007878 ORTHO05D010022 1.0e-19 102.4 473 30.2
SEGI_16968 Sequoiadendron giganteum HOM05D001827 ORTHO05D001790 4.7e-17 93.6 495 29.5
Atru.chr9.308 Acer truncatum HOM05D007878 ORTHO05D010022 5.2e-16 90.1 113 49.6
DCAR_021514 Daucus carota HOM05D007878 ORTHO05D010022 2.0e-15 88.2 349 28.7
MSTRG.22991 Avicennia marina HOM05D007878 ORTHO05D010022 9.9e-15 85.9 149 43.6
arahy.Tifrunner.gnm1.ann1.H3BYSM Arachis hypogaea HOM05D007878 ORTHO05D010022 1.1e-13 82.4 139 43.2
arahy.Tifrunner.gnm1.ann1.0CJ0KN Arachis hypogaea HOM05D007878 ORTHO05D010022 1.9e-13 81.6 139 43.2
Psat4g049000 Pisum sativum HOM05D007878 ORTHO05D010022 2.4e-13 81.3 107 50.5
SEGI_39497 Sequoiadendron giganteum HOM05D001827 ORTHO05D001790 2.4e-13 81.3 468 27.6
Migut.I00229 Erythranthe guttata HOM05D007878 ORTHO05D010022 3.3e-10 70.9 452 26.8
Rhsim02G0090400 Rhododendron simsii HOM05D001827 ORTHO05D001790 7.6e-07 59.7 442 30.5
QL05p067335 Quercus lobata HOM05D001827 ORTHO05D001790 9.9e-07 59.3 431 22.5
Haze_07028 Corylus avellana HOM05D001827 ORTHO05D001790 1.3e-06 58.9 446 21.3
Aa31LG5G11980 Aethionema arabicum HOM05D001812 ORTHO05D001874 1.7e-06 58.5 467 22.5
Medtr5g096080 Medicago truncatula HOM05D001827 ORTHO05D001790 2.2e-06 58.2 435 21.8
TAR629G2670 Trochodendron aralioides HOM05D001812 ORTHO05D001874 2.2e-06 58.2 187 28.9
Haze_09842 Corylus avellana HOM05D001827 ORTHO05D001790 3.8e-06 57.4 194 29.9
Sabra15G0086400 Salix brachista HOM05D007878 ORTHO05D010022 3.8e-06 57.4 58 53.4
Lj6g0015113 Lotus japonicus HOM05D001827 ORTHO05D001790 4.9e-06 57.0 169 31.4
QL08p003651 Quercus lobata HOM05D001827 ORTHO05D001790 6.4e-06 56.6 196 28.6
SEGI_06346 Sequoiadendron giganteum HOM05D001827 ORTHO05D001790 6.4e-06 56.6 342 23.7
Aa31LG2G12390 Aethionema arabicum HOM05D001827 ORTHO05D001790 8.4e-06 56.2 188 27.7
A08p32960 Brassica napus HOM05D001827 ORTHO05D001790 8.4e-06 56.2 188 26.1


User provided reference genes

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