Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 2.4e-31 138.3 72 100.0
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 4.6e-27 124.0 72 86.1
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 1.0e-26 122.9 72 84.7
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 1.3e-26 122.5 69 87.0
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 1.8e-26 122.1 69 88.4
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 5.1e-26 120.6 72 83.3
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 6.7e-26 120.2 69 85.5
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 1.1e-25 119.4 69 84.1
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.5e-25 119.0 67 88.1
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 1.5e-25 119.0 71 83.1
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.5e-25 119.0 68 85.3
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.5e-25 119.0 68 85.3
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 1.5e-25 119.0 68 85.3
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 1.9e-25 118.6 69 85.5
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 1.9e-25 118.6 71 81.7
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 2.5e-25 118.2 69 82.6
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 2.5e-25 118.2 69 82.6
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 2.5e-25 118.2 69 82.6
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 2.5e-25 118.2 69 82.6
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 2.5e-25 118.2 69 82.6
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 3.3e-25 117.9 69 85.5
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 3.3e-25 117.9 72 80.6
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 4.3e-25 117.5 69 82.6
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 4.3e-25 117.5 69 81.2
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 4.3e-25 117.5 69 82.6
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 5.7e-25 117.1 69 82.6
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 7.4e-25 116.7 72 79.2
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 1.3e-24 115.9 69 81.2
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 1.3e-24 115.9 69 81.2
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 1.3e-24 115.9 69 81.2
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 1.3e-24 115.9 69 81.2
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 1.3e-24 115.9 69 81.2
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 1.3e-24 115.9 69 79.7
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 1.3e-24 115.9 69 81.2
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 1.3e-24 115.9 70 81.4
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.3e-24 115.9 70 80.0
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 1.6e-24 115.5 69 79.7
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 1.6e-24 115.5 72 77.8
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.6e-24 115.5 68 82.4
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.6e-24 115.5 68 82.4
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 2.8e-24 114.8 69 78.3
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 2.8e-24 114.8 69 82.6
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 2.8e-24 114.8 68 80.9
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 3.7e-24 114.4 69 79.7
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 3.7e-24 114.4 68 82.4
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 3.7e-24 114.4 72 77.8
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 3.7e-24 114.4 67 85.1
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 3.7e-24 114.4 68 80.9
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 6.2e-24 113.6 69 81.2
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 8.2e-24 113.2 69 79.7
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 1.1e-23 112.8 69 81.2
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 1.1e-23 112.8 68 80.9
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 1.1e-23 112.8 69 82.6
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.1e-23 112.8 69 82.6
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.1e-23 112.8 69 82.6
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.1e-23 112.8 69 82.6
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.1e-23 112.8 69 82.6
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.1e-23 112.8 69 82.6
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 1.1e-23 112.8 68 80.9
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 1.4e-23 112.5 69 79.7
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 1.8e-23 112.1 69 79.7
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 1.8e-23 112.1 68 80.9
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 1.8e-23 112.1 68 79.4
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 2.4e-23 111.7 72 77.8
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 3.1e-23 111.3 69 76.8
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 3.1e-23 111.3 69 78.3
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 4.0e-23 110.9 72 76.4
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 4.0e-23 110.9 66 81.8
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 4.0e-23 110.9 71 73.2
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 4.0e-23 110.9 71 73.2
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 4.0e-23 110.9 66 81.8
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 6.9e-23 110.2 70 75.7
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 6.9e-23 110.2 70 75.7
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 9.0e-23 109.8 81 70.4
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 9.0e-23 109.8 69 76.8
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 1.2e-22 109.4 69 76.8
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 1.2e-22 109.4 69 76.8
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 1.2e-22 109.4 69 78.3
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 2.0e-22 108.6 72 73.6
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 2.0e-22 108.6 68 80.9
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 4.5e-22 107.5 69 73.9
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 5.8e-22 107.1 63 82.5
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 5.8e-22 107.1 68 77.9
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 1.3e-21 105.9 68 73.5
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 2.2e-21 105.1 70 72.9
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 3.8e-21 104.4 67 74.6
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 8.4e-21 103.2 72 72.2
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 1.4e-20 102.4 95 58.9
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 2.5e-20 101.7 66 75.8
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 5.5e-20 100.5 69 68.1
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 2.1e-19 98.6 69 66.7
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 2.7e-19 98.2 69 66.7
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 3.5e-19 97.8 61 80.3
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 4.6e-19 97.4 69 66.7
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 6.1e-19 97.1 69 65.2
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 7.9e-19 96.7 61 78.7
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 1.3e-18 95.9 69 66.7
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 2.3e-18 95.1 60 75.0
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 8.7e-18 93.2 87 59.8
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 1.1e-17 92.8 51 92.2
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 7.4e-17 90.1 50 90.0
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.3e-16 89.4 58 81.0
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 1.3e-16 89.4 51 88.2
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 1.6e-16 89.0 53 81.1
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.6e-16 89.0 55 81.8
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 2.2e-16 88.6 60 73.3
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 3.7e-16 87.8 69 62.3
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 4.8e-16 87.4 69 63.8
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 6.3e-16 87.0 59 74.6
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 3.1e-15 84.7 54 75.9
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 5.3e-15 84.0 65 66.2
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 6.9e-15 83.6 51 78.4
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 2.0e-14 82.0 69 62.3
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 2.0e-14 82.0 53 75.5
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 5.0e-13 77.4 55 70.9
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.1e-12 76.3 55 69.1
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.1e-12 76.3 68 58.8
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 5.5e-12 73.9 62 62.9
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 9.4e-12 73.2 62 62.9
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 3.9e-10 67.8 68 51.5
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 1.7e-08 62.4 39 82.1
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 2.2e-08 62.0 37 83.8
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 2.6e-06 55.1 47 57.4


User provided reference genes

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