Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007782001 Vitis vinifera HOM05D003549 ORTHO05D439742 6.3e-48 194.1 125 100.0
Lj1g0007079 Lotus japonicus HOM05D003549 ORTHO05D004223 4.9e-08 61.6 74 62.2
Actinidia19094 Actinidia chinensis HOM05D003549 ORTHO05D004223 6.4e-08 61.2 82 59.8
Glyma.06G183700 Glycine max HOM05D003549 ORTHO05D004223 8.3e-08 60.8 74 62.2
Glyma.04G181200 Glycine max HOM05D003549 ORTHO05D004223 1.1e-07 60.5 74 62.2
Dinv09155 Davidia involucrata HOM05D003549 ORTHO05D004223 1.4e-07 60.1 74 62.2
CiPaw.11G028500 Carya illinoinensis HOM05D003549 ORTHO05D004223 1.9e-07 59.7 72 59.7
Haze_07495 Corylus avellana HOM05D003549 ORTHO05D004223 1.9e-07 59.7 74 62.2
Phvul.001G059000 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 1.9e-07 59.7 74 59.5
TWI60G0590 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 1.9e-07 59.7 73 50.7
Lalb_Chr08g0236401 Lupinus albus HOM05D003549 ORTHO05D004223 2.4e-07 59.3 74 60.8
Lj6g0023924 Lotus japonicus HOM05D003549 ORTHO05D004223 3.2e-07 58.9 74 59.5
Phvul.009G179900 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 4.1e-07 58.5 74 60.8
TWI15G0885 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 5.4e-07 58.2 74 55.4
CSS0022405 Camellia sinensis var. sinensis HOM05D003549 ORTHO05D004223 7.1e-07 57.8 74 64.9
Glyma.14G134200 Glycine max HOM05D003549 ORTHO05D004223 9.2e-07 57.4 74 58.1
Actinidia04982 Actinidia chinensis HOM05D000215 ORTHO05D003454 1.6e-06 56.6 116 46.6
Actinidia33056 Actinidia chinensis HOM05D000215 ORTHO05D003454 1.6e-06 56.6 77 61.0
Thecc.03G009800 Theobroma cacao HOM05D003549 ORTHO05D004223 1.6e-06 56.6 75 66.7
Sed0001837 Sechium edule HOM05D003549 ORTHO05D004223 2.1e-06 56.2 73 49.3
TWI81G0050 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 2.1e-06 56.2 74 54.1
TWI81G1057 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 2.1e-06 56.2 74 54.1
TAR371G0468 Trochodendron aralioides HOM05D003549 ORTHO05D004223 2.1e-06 56.2 73 63.0
TAR622G0024 Trochodendron aralioides HOM05D003549 ORTHO05D004223 2.7e-06 55.8 86 54.7
TAR629G2438 Trochodendron aralioides HOM05D003549 ORTHO05D004223 2.7e-06 55.8 74 50.0
ClCG08G009420 Citrullus lanatus HOM05D003549 ORTHO05D004223 3.5e-06 55.5 73 60.3
MELO3C026538.2 Cucumis melo HOM05D003549 ORTHO05D004223 3.5e-06 55.5 73 60.3
CsaV3_6G031560 Cucumis sativus L. HOM05D003549 ORTHO05D004223 3.5e-06 55.5 73 60.3
FAN08G2999 Fragaria x ananassa HOM05D003549 ORTHO05D004223 3.5e-06 55.5 77 58.4
Glyma.17G198800 Glycine max HOM05D003549 ORTHO05D004223 3.5e-06 55.5 69 58.0
Lalb_Chr11g0071151 Lupinus albus HOM05D003549 ORTHO05D004223 3.5e-06 55.5 74 77.0
Prupe.5G175700 Prunus persica HOM05D003549 ORTHO05D004223 3.5e-06 55.5 73 61.6
GSVIVG01032498001 Vitis vinifera HOM05D003549 ORTHO05D004223 3.5e-06 55.5 74 56.8
FvH4_5g05150 Fragaria vesca HOM05D003549 ORTHO05D004223 4.6e-06 55.1 71 60.6
FAN18G4010 Fragaria x ananassa HOM05D003549 ORTHO05D004223 4.6e-06 55.1 71 60.6
MD14G1183200 Malus domestica HOM05D003549 ORTHO05D004223 4.6e-06 55.1 73 60.3
PSO478G4862 Papaver somniferum HOM05D003549 ORTHO05D004223 4.6e-06 55.1 74 51.4
PGR083G2145 Punica granatum HOM05D003549 ORTHO05D004223 4.6e-06 55.1 74 70.3
Rhsim12G0163400 Rhododendron simsii HOM05D003549 ORTHO05D004223 4.6e-06 55.1 72 50.0
THA.LOC104823782 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 4.6e-06 55.1 75 61.3
FAN04G1549 Fragaria x ananassa HOM05D003549 ORTHO05D004223 6.0e-06 54.7 71 59.2
FAN13G2761 Fragaria x ananassa HOM05D003549 ORTHO05D004223 6.0e-06 54.7 71 59.2
MBI15_g31119_MAGBIO Magnolia biondii HOM05D003549 ORTHO05D004223 6.0e-06 54.7 73 61.6
MD06G1177000 Malus domestica HOM05D003549 ORTHO05D004223 6.0e-06 54.7 73 57.5
Peaxi162Scf00017g02716 Petunia axillaris HOM05D003549 ORTHO05D004223 6.0e-06 54.7 75 56.0
RcHm_v2.0_Chr7g0193821 Rosa chinensis HOM05D003549 ORTHO05D004223 6.0e-06 54.7 71 57.7
Aa31LG2G1940 Aethionema arabicum HOM05D003549 ORTHO05D004223 7.8e-06 54.3 74 59.5
Potri.001G334600 Populus trichocarpa HOM05D003549 ORTHO05D004223 7.8e-06 54.3 71 60.6


User provided reference genes

Program Settings