Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007704001 Vitis vinifera HOM05D005107 ORTHO05D006200 3.8e-196 688.0 344 100.0
Dinv20630 Davidia involucrata HOM05D005107 ORTHO05D006200 1.5e-131 473.4 344 69.8
Hma1.2p1_0592F.1_g185565 Hydrangea macrophylla HOM05D005107 ORTHO05D006200 1.8e-129 466.5 344 69.2
Prupe.5G170500 Prunus persica HOM05D005107 ORTHO05D006200 3.8e-127 458.8 344 67.2
Cpa.g.sc153.5 Carica papaya HOM05D005107 ORTHO05D006200 2.7e-125 452.6 344 65.1
MD14G1176600 Malus domestica HOM05D005107 ORTHO05D006200 3.5e-125 452.2 344 65.1
QL10p008945 Quercus lobata HOM05D005107 ORTHO05D006200 1.0e-124 450.7 346 65.3
Atru.chr9.2518 Acer truncatum HOM05D005107 ORTHO05D006200 6.7e-124 448.0 345 66.4
CSS0000196 Camellia sinensis var. sinensis HOM05D005107 ORTHO05D006200 8.7e-124 447.6 344 66.0
TAR374G1030 Trochodendron aralioides HOM05D005107 ORTHO05D006200 1.9e-123 446.4 344 65.4
FvH4_5g05630 Fragaria vesca HOM05D005107 ORTHO05D006200 3.7e-122 442.2 344 64.5
Hma1.2p1_0046F.1_g026720 Hydrangea macrophylla HOM05D005107 ORTHO05D006200 2.4e-121 439.5 344 65.4
Thecc.03G018700 Theobroma cacao HOM05D005107 ORTHO05D006200 6.9e-121 438.0 344 62.5
CiPaw.11G023500 Carya illinoinensis HOM05D005107 ORTHO05D006200 2.6e-120 436.0 346 65.0
RcHm_v2.0_Chr7g0193181 Rosa chinensis HOM05D005107 ORTHO05D006200 1.0e-119 434.1 354 63.3
Potri.015G079700 Populus trichocarpa HOM05D005107 ORTHO05D006200 2.5e-118 429.5 345 62.9
MD06G1170900 Malus domestica HOM05D005107 ORTHO05D006200 7.2e-118 427.9 344 63.1
COL.COLO4_30099 Corchorus olitorius HOM05D005107 ORTHO05D006200 1.5e-115 420.2 344 61.3
CSS0014290 Camellia sinensis var. sinensis HOM05D005107 ORTHO05D006200 5.7e-115 418.3 344 64.2
Potri.012G088600 Populus trichocarpa HOM05D005107 ORTHO05D006200 7.4e-115 417.9 344 62.2
Eucgr.B00249 Eucalyptus grandis HOM05D005107 ORTHO05D006200 9.7e-115 417.5 344 61.6
TAR622G1391 Trochodendron aralioides HOM05D005107 ORTHO05D006200 1.3e-114 417.2 344 63.4
Ciclev10021009m.g Citrus clementina HOM05D005107 ORTHO05D006200 4.8e-114 415.2 346 62.7
TWI23G1004 Tripterygium wilfordii HOM05D005107 ORTHO05D006200 1.4e-113 413.7 344 61.0
CSS0028022 Camellia sinensis var. sinensis HOM05D005107 ORTHO05D006200 3.1e-113 412.5 344 63.7
Sabra12G0063800 Salix brachista HOM05D005107 ORTHO05D006200 3.1e-113 412.5 344 61.3
Sabra15G0104000 Salix brachista HOM05D005107 ORTHO05D006200 1.5e-112 410.2 356 60.7
Nitab4.5_0001207g0070 Nicotiana tabacum HOM05D005107 ORTHO05D006200 2.0e-112 409.8 334 63.5
Manes.06G107100 Manihot esculenta HOM05D005107 ORTHO05D006200 1.3e-111 407.1 345 62.3
FAN04G1011 Fragaria x ananassa HOM05D005107 ORTHO05D006200 1.7e-111 406.8 344 61.9
FAN18G1528 Fragaria x ananassa HOM05D005107 ORTHO05D006200 3.8e-111 405.6 344 61.3
PGSC0003DMG401018164 Solanum tuberosum HOM05D005107 ORTHO05D006200 1.1e-110 404.1 344 61.6
CANSAT80G2623 Cannabis sativa HOM05D005107 ORTHO05D006200 1.4e-110 403.7 345 59.1
FAN08G1807 Fragaria x ananassa HOM05D005107 ORTHO05D006200 1.9e-110 403.3 345 62.0
Duzib205G0074 Durio zibethinus HOM05D005107 ORTHO05D006200 2.5e-110 402.9 335 60.0
Nn2g12593 Nelumbo nucifera HOM05D005107 ORTHO05D006200 4.2e-110 402.1 345 59.4
Gohir.A12G272600 Gossypium hirsutum HOM05D005107 ORTHO05D006200 5.5e-110 401.7 344 57.3
Gohir.D12G273300 Gossypium hirsutum HOM05D005107 ORTHO05D006200 1.2e-109 400.6 344 57.6
Gorai.008G293700 Gossypium raimondii HOM05D005107 ORTHO05D006200 1.6e-109 400.2 344 57.3
Sopen03g031750 Solanum pennellii HOM05D005107 ORTHO05D006200 2.7e-109 399.4 344 61.3
Haze_07542 Corylus avellana HOM05D005107 ORTHO05D006200 3.0e-108 396.0 281 69.0
Solyc03g112670.3 Solanum lycopersicum HOM05D005107 ORTHO05D006200 5.7e-107 391.7 344 61.0
CAN.G1166.21 Capsicum annuum HOM05D005107 ORTHO05D006200 2.8e-106 389.4 344 59.9
PGR083G1692 Punica granatum HOM05D005107 ORTHO05D006200 6.3e-106 388.3 347 58.8
Nitab4.5_0003229g0090 Nicotiana tabacum HOM05D005107 ORTHO05D006200 8.2e-106 387.9 326 62.3
Gorai.001G071700 Gossypium raimondii HOM05D005107 ORTHO05D006200 5.3e-105 385.2 344 55.2
Gohir.D07G068200 Gossypium hirsutum HOM05D005107 ORTHO05D006200 1.5e-104 383.6 344 55.2
Peaxi162Scf00089g01740 Petunia axillaris HOM05D005107 ORTHO05D006200 1.5e-104 383.6 327 60.6
TWI14G0467 Tripterygium wilfordii HOM05D005107 ORTHO05D006200 2.6e-104 382.9 344 57.8
Migut.O00123 Erythranthe guttata HOM05D005107 ORTHO05D006200 2.9e-103 379.4 345 58.0
MBI10_g44387_MAGBIO Magnolia biondii HOM05D005107 ORTHO05D006200 2.9e-103 379.4 337 60.2
Sp2g26180 Schrenkiella parvula HOM05D005107 ORTHO05D006200 2.9e-103 379.4 347 55.0
Sc22g0001200 Simmondsia chinensis HOM05D005107 ORTHO05D006200 2.9e-103 379.4 344 55.8
ClCG01G013290 Citrullus lanatus HOM05D005107 ORTHO05D006200 5.0e-103 378.6 345 57.4
Lj1g0017341 Lotus japonicus HOM05D005107 ORTHO05D006200 8.5e-103 377.9 344 56.1
Nn4g22685 Nelumbo nucifera HOM05D005107 ORTHO05D006200 8.5e-103 377.9 345 58.0
Nn4g22690 Nelumbo nucifera HOM05D005107 ORTHO05D006200 8.5e-103 377.9 345 58.0
AL8G40070 Arabidopsis lyrata HOM05D005107 ORTHO05D006200 1.1e-102 377.5 348 54.6
Carub.0008s2376 Capsella rubella HOM05D005107 ORTHO05D006200 5.5e-102 375.2 347 54.2
Sed0009116 Sechium edule HOM05D005107 ORTHO05D006200 9.4e-102 374.4 345 57.1
Phvul.009G176100 Phaseolus vulgaris HOM05D005107 ORTHO05D006200 1.2e-101 374.0 344 55.2
VMungo1309G0437 Vigna mungo HOM05D005107 ORTHO05D006200 1.2e-101 374.0 344 55.8
Gohir.A07G063500 Gossypium hirsutum HOM05D005107 ORTHO05D006200 1.6e-101 373.6 344 54.4
Lj4g0022030 Lotus japonicus HOM05D005107 ORTHO05D006200 4.7e-101 372.1 345 56.5
Thhalv10004512m.g Eutrema salsugineum HOM05D005107 ORTHO05D006200 3.0e-100 369.4 347 54.5
Oeu016417.1 Olea europaea HOM05D005107 ORTHO05D006200 3.0e-100 369.4 329 56.5
Glyma.06G180400 Glycine max HOM05D005107 ORTHO05D006200 2.0e-99 366.7 345 57.7
Aqoxy3G02846 Aquilegia oxysepala HOM05D005107 ORTHO05D006200 2.6e-99 366.3 344 57.0
CARHR276850 Cardamine hirsuta HOM05D005107 ORTHO05D006200 3.3e-99 365.9 347 53.3
AT5G63050 Arabidopsis thaliana HOM05D005107 ORTHO05D006200 5.7e-99 365.2 347 52.7
MSTRG.23144 Avicennia marina HOM05D005107 ORTHO05D006200 5.7e-99 365.2 345 54.8
Glyma.04G185700 Glycine max HOM05D005107 ORTHO05D006200 1.7e-98 363.6 344 54.4
Aa31LG11G620 Aethionema arabicum HOM05D005107 ORTHO05D006200 3.7e-98 362.5 339 52.8
A09p08000 Brassica napus HOM05D005107 ORTHO05D006200 3.7e-98 362.5 339 53.1
BolC9t53818H Brassica oleracea HOM05D005107 ORTHO05D006200 8.2e-98 361.3 348 51.7
PSO063G3062 Papaver somniferum HOM05D005107 ORTHO05D006200 4.1e-97 359.0 345 56.5
FAN18G1595 Fragaria x ananassa HOM05D005107 ORTHO05D008464 7.0e-97 358.2 319 58.9
Manes.14G063800 Manihot esculenta HOM05D005107 ORTHO05D006200 9.1e-97 357.8 307 59.9
PSO832G2872 Papaver somniferum HOM05D005107 ORTHO05D006200 1.6e-96 357.1 345 55.7
arahy.Tifrunner.gnm1.ann1.6379ZA Arachis hypogaea HOM05D005107 ORTHO05D006200 3.5e-96 355.9 345 53.3
FAN13G2858 Fragaria x ananassa HOM05D005107 ORTHO05D008464 3.5e-96 355.9 319 59.2
arahy.Tifrunner.gnm1.ann1.5AH6W7 Arachis hypogaea HOM05D005107 ORTHO05D006200 7.7e-96 354.8 345 53.0
MELO3C002281.2 Cucumis melo HOM05D005107 ORTHO05D006200 1.0e-95 354.4 347 54.2
C09p09050 Brassica napus HOM05D005107 ORTHO05D006200 2.9e-95 352.8 339 51.9
Lalb_Chr08g0236621 Lupinus albus HOM05D005107 ORTHO05D006200 3.8e-95 352.4 344 52.6
EL10Ac2g03054 Beta vulgaris HOM05D005107 ORTHO05D006200 5.0e-95 352.1 344 52.9
Actinidia19110 Actinidia chinensis HOM05D005107 ORTHO05D006200 1.1e-94 350.9 322 56.2
Peaxi162Scf00255g00912 Petunia axillaris HOM05D005107 ORTHO05D006200 1.9e-94 350.1 345 53.6
SalBow5G2679 Salvia bowleyana HOM05D005107 ORTHO05D006200 1.2e-93 347.4 347 53.9
Ca_16156_v3 Cicer arietinum L. HOM05D005107 ORTHO05D006200 1.0e-92 344.4 344 51.7
Ca_21938_v3 Cicer arietinum L. HOM05D005107 ORTHO05D006200 4.0e-92 342.4 344 53.2
Dinv38563 Davidia involucrata HOM05D003072 ORTHO05D008464 8.8e-92 341.3 260 69.2
THA.LOC104818212 Tarenaya hassleriana HOM05D005107 ORTHO05D006200 1.5e-91 340.5 344 50.0
HanXRQChr05g0154601 Helianthus annuus HOM05D005107 ORTHO05D006200 2.6e-91 339.7 350 54.6
VMungo1215G1987 Vigna mungo HOM05D005107 ORTHO05D006200 3.3e-91 339.3 338 54.4
TWI39G0316 Tripterygium wilfordii HOM05D005107 ORTHO05D006200 1.7e-90 337.0 352 52.8
Cc06_g17290 Coffea canephora HOM05D005107 ORTHO05D006200 2.8e-90 336.3 334 54.8
Phvul.003G202200 Phaseolus vulgaris HOM05D005107 ORTHO05D006200 3.7e-90 335.9 346 52.3
Medtr4g105500 Medicago truncatula HOM05D005107 ORTHO05D006200 1.4e-89 334.0 335 52.8
Medtr3g077490 Medicago truncatula HOM05D005107 ORTHO05D006200 1.8e-89 333.6 344 51.2
TPR.G37531 Trifolium pratense HOM05D005107 ORTHO05D006200 2.4e-89 333.2 344 51.2
BraA09t36452Z Brassica rapa HOM05D005107 ORTHO05D006200 3.5e-88 329.3 294 55.4
Lj9C446G12 Lonicera japonica HOM05D004430 ORTHO05D005088 1.3e-87 327.4 344 53.5
ECA246G1934 Erigeron canadensis HOM05D005107 ORTHO05D006200 1.7e-87 327.0 337 51.9
Sed0010155 Sechium edule HOM05D005107 ORTHO05D006200 1.7e-87 327.0 345 51.3
Ah.10g031930 Amaranthus hybridus HOM05D005107 ORTHO05D006200 2.2e-87 326.6 345 51.9
Psat4g058600 Pisum sativum HOM05D005107 ORTHO05D006200 6.5e-87 325.1 344 48.8
AUR62018143 Chenopodium quinoa HOM05D005107 ORTHO05D006200 1.5e-86 323.9 308 54.5
SalBow6G4644 Salvia bowleyana HOM05D005107 ORTHO05D006200 2.5e-86 323.2 345 49.3
BcaB04g19949 Brassica carinata HOM05D005107 ORTHO05D006200 3.2e-86 322.8 292 55.5
BraA06t25929Z Brassica rapa HOM05D005107 ORTHO05D006200 5.5e-86 322.0 347 49.9
THA.LOC104821481 Tarenaya hassleriana HOM05D005107 ORTHO05D006200 2.1e-85 320.1 346 48.3
Psat5g115520 Pisum sativum HOM05D005107 ORTHO05D006200 3.6e-85 319.3 344 49.7
HanXRQChr08g0235041 Helianthus annuus HOM05D005107 ORTHO05D006200 1.8e-84 317.0 346 50.3
BolC8t50877H Brassica oleracea HOM05D005107 ORTHO05D006200 2.3e-84 316.6 347 49.9
A06p29810 Brassica napus HOM05D005107 ORTHO05D006200 3.0e-84 316.2 347 49.9
Migut.D01962 Erythranthe guttata HOM05D005107 ORTHO05D006200 7.5e-83 311.6 344 51.2
BolC3t18614H Brassica oleracea HOM05D005107 ORTHO05D006200 9.8e-83 311.2 347 49.0
AUR62042560 Chenopodium quinoa HOM05D005107 ORTHO05D006200 1.3e-82 310.8 308 53.6
TPR.G14919 Trifolium pratense HOM05D005107 ORTHO05D006200 1.3e-82 310.8 346 49.7
CsaV3_1G008660 Cucumis sativus L. HOM05D005107 ORTHO05D006200 4.8e-82 308.9 345 50.1
DCAR_016047 Daucus carota HOM05D005107 ORTHO05D006200 4.8e-82 308.9 345 49.6
C08p32660 Brassica napus HOM05D005107 ORTHO05D006200 6.3e-82 308.5 337 50.1
ClCG06G017120 Citrullus lanatus HOM05D005107 ORTHO05D006200 8.3e-82 308.1 328 50.9
Lsat_1_v5_gn_5_15301 Lactuca sativa HOM05D005107 ORTHO05D006200 1.1e-81 307.8 343 50.7
CiPaw.12G028400 Carya illinoinensis HOM05D005107 ORTHO05D006200 5.0e-79 298.9 335 49.9
Lj5A126T86 Lonicera japonica HOM05D005107 ORTHO05D006200 1.6e-77 293.9 278 55.8
BcaC01g02550 Brassica carinata HOM05D005107 ORTHO05D006200 1.3e-74 284.3 347 45.5
CDE05G1562 Ceratophyllum demersum HOM05D005107 ORTHO05D006200 1.8e-73 280.4 286 52.1
MELO3C026284.2 Cucumis melo HOM05D005107 ORTHO05D006200 1.6e-72 277.3 328 47.3
unitig_26.g9615 Utricularia gibba HOM05D005107 ORTHO05D006200 3.6e-69 266.2 282 49.6
Hund13172 Selenicereus undatus HOM05D005107 ORTHO05D006200 2.7e-64 250.0 335 41.8
C03p63570 Brassica napus HOM05D005107 ORTHO05D006200 7.8e-64 248.4 306 45.8
HPP92_001300 Vanilla planifolia HOM05D005107 ORTHO05D006200 1.0e-63 248.1 281 47.7
ECA232G4933 Erigeron canadensis HOM05D005107 ORTHO05D006200 1.5e-62 244.2 346 43.1
Oeu024703.1 Olea europaea HOM05D005107 ORTHO05D006200 2.5e-62 243.4 199 61.3
Eucgr.J01240 Eucalyptus grandis HOM05D005107 ORTHO05D006200 8.9e-60 235.0 137 78.1
ECA232G2224 Erigeron canadensis HOM05D005107 ORTHO05D006200 4.9e-58 229.2 244 50.0
Eucgr.C04410 Eucalyptus grandis HOM05D005107 ORTHO05D006200 2.3e-55 220.3 137 74.5
Eucgr.C03135 Eucalyptus grandis HOM05D005107 ORTHO05D006200 5.0e-55 219.2 129 76.7
BcaB02g09719 Brassica carinata HOM05D005107 ORTHO05D006200 6.6e-55 218.8 343 39.4
SGA_v2.0_scaffold90G27886 Striga asiatica HOM05D005107 ORTHO05D006200 7.1e-49 198.7 212 47.2
Lsat_1_v5_gn_1_28200 Lactuca sativa HOM05D005107 ORTHO05D006200 4.7e-45 186.0 335 39.7
HanXRQChr02g0035961 Helianthus annuus HOM05D005107 ORTHO05D006200 3.4e-43 179.9 288 41.0
BcaC04g23368 Brassica carinata HOM05D005107 ORTHO05D006200 2.1e-32 144.1 103 60.2
Duzib068G0452 Durio zibethinus HOM05D005107 ORTHO05D006200 2.3e-23 114.0 133 47.4
ATR1152G005 Amborella trichopoda HOM05D005107 ORTHO05D006200 6.7e-15 85.9 206 32.5
SEGI_21940 Sequoiadendron giganteum HOM05D024261 ORTHO05D006200 6.9e-12 75.9 208 29.3
Hma1.2p1_0522F.1_g171880 Hydrangea macrophylla HOM05D005107 ORTHO05D006200 2.1e-08 64.3 39 79.5
AagrBONN_evm.TU.Sc2ySwM_362.2194 Anthoceros agrestis HOM05D024261 ORTHO05D026617 6.7e-07 59.3 264 21.6


User provided reference genes

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