Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007644001 Vitis vinifera HOM05D008921 ORTHO05D010506 3.1e-136 488.4 240 100.0
Gorai.003G115500 Gossypium raimondii HOM05D008921 ORTHO05D010506 1.5e-18 97.4 99 47.5
Gohir.D03G109400 Gossypium hirsutum HOM05D008921 ORTHO05D010506 7.7e-18 95.1 99 46.5
COL.COLO4_36759 Corchorus olitorius HOM05D008921 ORTHO05D010506 1.3e-17 94.4 99 47.5
Potri.012G085901 Populus trichocarpa HOM05D008921 ORTHO05D010506 7.9e-15 85.1 71 57.7
Thecc.03G025900 Theobroma cacao HOM05D008921 ORTHO05D010506 1.4e-14 84.3 115 40.9
Manes.14G060500 Manihot esculenta HOM05D008921 ORTHO05D010506 5.7e-13 79.0 113 38.1
CSS0048204 Camellia sinensis var. sinensis HOM05D008921 ORTHO05D010506 2.4e-11 73.6 117 36.8
Cfa019220 Carpinus fangiana HOM05D008921 ORTHO05D010506 2.4e-11 73.6 113 38.9
Gohir.A03G057050 Gossypium hirsutum HOM05D008921 ORTHO05D010506 2.4e-11 73.6 80 43.8
Hma1.2p1_0046F.1_g027140 Hydrangea macrophylla HOM05D008921 ORTHO05D010506 4.1e-11 72.8 112 37.5
Cpa.g.sc159.19 Carica papaya HOM05D008921 ORTHO05D010506 5.3e-11 72.4 108 38.9
Sabra12G0061700 Salix brachista HOM05D008921 ORTHO05D010506 5.3e-11 72.4 113 38.1
Potri.012G085800 Populus trichocarpa HOM05D008921 ORTHO05D010506 9.1e-11 71.6 114 37.7
Aqoxy5G03744 Aquilegia oxysepala HOM05D008921 ORTHO05D010506 3.4e-10 69.7 110 38.2
Atru.chr9.2579 Acer truncatum HOM05D008921 ORTHO05D010506 4.5e-10 69.3 118 34.7
Cfa019218 Carpinus fangiana HOM05D008921 ORTHO05D010506 1.3e-09 67.8 120 34.2
Haze_07588 Corylus avellana HOM05D008921 ORTHO05D010506 2.9e-09 66.6 129 34.9
Nitab4.5_0000025g0320 Nicotiana tabacum HOM05D012681 ORTHO05D010506 2.9e-09 66.6 104 39.4
Nitab4.5_0001566g0030 Nicotiana tabacum HOM05D012681 ORTHO05D010506 3.8e-09 66.2 112 35.7
Peaxi162Scf00801g00022 Petunia axillaris HOM05D012681 ORTHO05D010506 5.0e-09 65.9 112 34.8
Nitab4.5_0010452g0050 Nicotiana tabacum HOM05D012681 ORTHO05D010506 1.4e-08 64.3 106 32.1
Peaxi162Scf00089g00137 Petunia axillaris HOM05D012681 ORTHO05D010506 7.2e-08 62.0 106 29.2
Eucgr.K02790 Eucalyptus grandis HOM05D042355 ORTHO05D010506 9.4e-08 61.6 109 33.0
Nitab4.5_0001793g0040 Nicotiana tabacum HOM05D012681 ORTHO05D010506 1.6e-07 60.8 112 33.0
Potri.015G084101 Populus trichocarpa HOM05D008921 ORTHO05D010506 2.1e-07 60.5 89 41.6
Eucgr.K02789 Eucalyptus grandis HOM05D042355 ORTHO05D010506 6.1e-07 58.9 131 30.5
Eucgr.K02796 Eucalyptus grandis HOM05D042355 ORTHO05D010506 1.0e-06 58.2 51 49.0
Eucgr.B00219 Eucalyptus grandis HOM05D008921 ORTHO05D010506 1.4e-06 57.8 122 27.9
Prupe.5G165500 Prunus persica HOM05D008921 ORTHO05D010506 1.4e-06 57.8 100 34.0
Prupe.6G157600 Prunus persica HOM05D008921 ORTHO05D010506 5.2e-06 55.8 103 32.0
Solyc03g112210.1 Solanum lycopersicum HOM05D012681 ORTHO05D010506 8.8e-06 55.1 85 35.3
Sopen03g031310 Solanum pennellii HOM05D012681 ORTHO05D010506 8.8e-06 55.1 85 35.3


User provided reference genes

Program Settings