Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007632001 Vitis vinifera HOM05D007670 ORTHO05D009646 5.4e-227 790.8 440 100.0
Thecc.03G116000 Theobroma cacao HOM05D007670 ORTHO05D009646 5.3e-142 508.4 437 69.6
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 1.3e-124 450.7 424 64.9
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 9.4e-123 444.5 438 64.2
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 2.7e-122 443.0 440 63.2
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 4.0e-121 439.1 388 62.1
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 4.4e-120 435.6 442 62.0
FAN18G1020 Fragaria x ananassa HOM05D007670 ORTHO05D009646 5.4e-118 428.7 442 57.2
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 9.1e-118 427.9 429 61.8
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 5.9e-117 425.2 446 59.9
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 5.9e-117 425.2 449 62.1
CANSAT80G0945 Cannabis sativa HOM05D007670 ORTHO05D009646 2.9e-116 422.9 425 56.9
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 1.9e-115 420.2 438 57.5
FAN04G2873 Fragaria x ananassa HOM05D007670 ORTHO05D009646 3.3e-115 419.5 445 55.5
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 9.8e-112 407.9 446 55.2
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.3e-111 407.5 442 56.1
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 8.3e-111 404.8 441 55.3
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 3.2e-110 402.9 376 60.1
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 3.9e-108 396.0 435 59.1
Cc04_g11380 Coffea canephora HOM05D007670 ORTHO05D009646 5.0e-108 395.6 451 52.1
RcHm_v2.0_Chr7g0192411 Rosa chinensis HOM05D007670 ORTHO05D009646 1.9e-107 393.7 397 57.7
MD14G1170500 Malus domestica HOM05D007670 ORTHO05D009646 5.6e-107 392.1 425 54.8
Glyma.05G042100 Glycine max HOM05D007670 ORTHO05D009646 3.6e-106 389.4 437 53.8
TAR629G1516 Trochodendron aralioides HOM05D007670 ORTHO05D009646 3.6e-106 389.4 260 75.8
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 6.1e-106 388.7 437 55.8
DCAR_007451 Daucus carota HOM05D007670 ORTHO05D009646 1.4e-105 387.5 451 51.7
Hma1.2p1_1092F.1_g255930 Hydrangea macrophylla HOM05D007670 ORTHO05D009646 1.4e-105 387.5 391 62.9
Migut.O00167 Erythranthe guttata HOM05D007670 ORTHO05D009646 2.3e-105 386.7 390 62.3
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 2.6e-104 383.3 439 52.8
Nitab4.5_0008913g0020 Nicotiana tabacum HOM05D007670 ORTHO05D009646 1.3e-103 380.9 468 55.8
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 6.4e-103 378.6 397 56.2
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 1.1e-102 377.9 438 56.4
Lj5C130G15 Lonicera japonica HOM05D007670 ORTHO05D009646 1.2e-101 374.4 351 60.1
Manes.06G111300 Manihot esculenta HOM05D007670 ORTHO05D009646 2.0e-101 373.6 364 64.6
arahy.Tifrunner.gnm1.ann1.2S9CTF Arachis hypogaea HOM05D007670 ORTHO05D009646 4.6e-101 372.5 435 51.5
Gorai.003G106900 Gossypium raimondii HOM05D007670 ORTHO05D009646 1.0e-100 371.3 378 61.1
arahy.Tifrunner.gnm1.ann1.4HF9FM Arachis hypogaea HOM05D007670 ORTHO05D009646 2.3e-100 370.2 433 50.8
SalBow5G5044 Salvia bowleyana HOM05D007670 ORTHO05D009646 3.0e-100 369.8 455 55.6
Nitab4.5_0002522g0060 Nicotiana tabacum HOM05D007670 ORTHO05D009646 3.9e-100 369.4 446 56.5
PGSC0003DMG400018192 Solanum tuberosum HOM05D007670 ORTHO05D009646 6.6e-100 368.6 435 56.3
SalBow5G0325 Salvia bowleyana HOM05D007670 ORTHO05D009646 8.6e-100 368.2 460 55.0
Lj4g0014046 Lotus japonicus HOM05D007670 ORTHO05D009646 3.3e-99 366.3 436 51.8
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 1.2e-98 364.4 434 51.8
Gohir.D03G101500 Gossypium hirsutum HOM05D007670 ORTHO05D009646 2.1e-98 363.6 378 60.6
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 6.8e-97 358.6 447 49.9
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 1.2e-96 357.8 462 49.4
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 1.5e-96 357.5 424 52.1
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 1.3e-95 354.4 445 49.9
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 2.9e-95 353.2 458 49.1
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 6.4e-95 352.1 435 56.6
Lsat_1_v5_gn_5_13921 Lactuca sativa HOM05D007670 ORTHO05D009646 4.6e-93 345.9 439 54.2
CiPaw.12G031800 Carya illinoinensis HOM05D007670 ORTHO05D009646 3.9e-92 342.8 419 56.3
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 2.8e-90 336.7 295 61.4
ECA246G3610 Erigeron canadensis HOM05D007670 ORTHO05D009646 4.9e-87 325.9 478 50.6
ATR0824G010 Amborella trichopoda HOM05D007670 ORTHO05D009646 7.8e-85 318.5 443 48.3
QL10p006759 Quercus lobata HOM05D007670 ORTHO05D009646 9.9e-80 301.6 447 46.1
MELO3C002304.2 Cucumis melo HOM05D007670 ORTHO05D009646 4.2e-78 296.2 272 58.1
Peaxi162Scf00089g01230 Petunia axillaris HOM05D007670 ORTHO05D009646 3.4e-72 276.6 242 61.2
Solyc03g112120.3 Solanum lycopersicum HOM05D007670 ORTHO05D009646 6.6e-68 262.3 240 59.6
HanXRQChr05g0156201 Helianthus annuus HOM05D007670 ORTHO05D009646 8.1e-66 255.4 351 50.4
Actinidia24601 Actinidia chinensis HOM05D007670 ORTHO05D009646 1.4e-65 254.6 232 58.6
HPP92_003438 Vanilla planifolia HOM05D001493 ORTHO05D001681 4.5e-64 249.6 410 40.2
Dinv20593 Davidia involucrata HOM05D007670 ORTHO05D009646 9.3e-62 241.9 267 65.2
HPP92_001311 Vanilla planifolia HOM05D007670 ORTHO05D009646 6.9e-57 225.7 384 41.1
Glyma.17G124700 Glycine max HOM05D007670 ORTHO05D009646 2.9e-55 220.3 173 67.6
SEGI_28887 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 4.6e-53 213.0 237 48.9
Zm00001eb388830 Zea mays HOM05D007670 ORTHO05D009646 4.3e-51 206.5 280 43.6
Glyma.17G124800 Glycine max HOM05D007670 ORTHO05D009646 6.9e-41 172.6 268 43.3
Os01g0909300 Oryza sativa ssp. japonica HOM05D007670 ORTHO05D009646 1.9e-38 164.5 167 51.5
Cpa.g.sc159.12 Carica papaya HOM05D007670 ORTHO05D009646 2.5e-35 154.1 109 71.6
Zm00001eb143920 Zea mays HOM05D007670 ORTHO05D009646 3.3e-35 153.7 237 39.7
Pp3c11_2120 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.1e-33 148.7 225 40.0
Zm00001eb393770 Zea mays HOM05D007670 ORTHO05D009646 6.5e-31 139.4 165 46.1
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 4.2e-30 136.7 226 35.4
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 4.2e-30 136.7 226 35.4
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 7.9e-29 132.5 241 34.9
Pp3c21_7410 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.4e-25 120.9 229 34.1
Pp3c18_13530 Physcomitrium patens HOM05D007670 ORTHO05D009646 8.5e-23 112.5 293 31.4
Mapoly0020s0028 Marchantia polymorpha HOM05D007670 ORTHO05D009646 2.5e-22 110.9 219 37.4
Peaxi162Scf00089g01229 Petunia axillaris HOM05D007670 ORTHO05D009646 1.0e-20 105.5 201 50.2
Pp3c7_23860 Physcomitrium patens HOM05D007670 ORTHO05D009646 5.7e-19 99.8 291 28.5
Solyc03g112110.1 Solanum lycopersicum HOM05D007670 ORTHO05D009646 3.7e-18 97.1 191 48.7
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 7.0e-17 92.8 225 32.0
SEGI_38678 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 7.0e-17 92.8 103 53.4
Sabra15G0107400 Salix brachista HOM05D007670 ORTHO05D009646 4.2e-14 83.6 311 38.3
MELO3C031542.2 Cucumis melo HOM05D007670 ORTHO05D009646 1.2e-13 82.0 101 48.5
Aqoxy3G00774 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 1.8e-12 78.2 145 37.9
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 5.7e-11 73.2 246 26.4
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 8.3e-10 69.3 266 24.8
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 1.8e-09 68.2 240 26.2
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 1.8e-09 68.2 268 26.1
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 2.4e-09 67.8 272 23.9
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 3.1e-09 67.4 264 25.4
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 4.1e-09 67.0 237 25.7
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 4.1e-09 67.0 268 26.5
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 7.0e-09 66.2 237 25.7
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 7.0e-09 66.2 226 23.9
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 1.2e-08 65.5 237 25.7
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 2.0e-08 64.7 246 23.2
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 3.5e-08 63.9 264 23.1
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 3.5e-08 63.9 238 25.2
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 3.5e-08 63.9 238 25.2
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 5.9e-08 63.2 290 24.1
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 5.9e-08 63.2 237 24.5
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 7.7e-08 62.8 242 25.2
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 1.3e-07 62.0 292 24.3
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 1.7e-07 61.6 292 23.3
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 1.7e-07 61.6 237 25.7
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 1.7e-07 61.6 239 24.7
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 1.7e-07 61.6 219 25.1
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 2.2e-07 61.2 291 24.1
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 2.2e-07 61.2 200 24.0
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 2.9e-07 60.8 292 25.0
FAN25G3065 Fragaria x ananassa HOM05D007837 ORTHO05D009965 2.9e-07 60.8 281 23.1
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 2.9e-07 60.8 278 24.1
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 2.9e-07 60.8 255 24.3
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 2.9e-07 60.8 284 23.9
CANSAT35G1648 Cannabis sativa HOM05D007837 ORTHO05D009965 5.0e-07 60.1 245 24.1
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 5.0e-07 60.1 206 23.8
ATR1098G128 Amborella trichopoda HOM05D007837 ORTHO05D009965 6.5e-07 59.7 235 26.4
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 6.5e-07 59.7 198 24.7
GSVIVG01037969001 Vitis vinifera HOM05D007837 ORTHO05D009965 6.5e-07 59.7 206 26.7
arahy.Tifrunner.gnm1.ann1.FUT705 Arachis hypogaea HOM05D007837 ORTHO05D009965 8.5e-07 59.3 218 25.2
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 1.1e-06 58.9 225 24.0
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 1.1e-06 58.9 226 23.9
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 1.1e-06 58.9 231 24.7
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 1.1e-06 58.9 231 24.7
COL.COLO4_22875 Corchorus olitorius HOM05D007837 ORTHO05D009965 2.5e-06 57.8 269 24.2
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 3.2e-06 57.4 267 24.7


User provided reference genes

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