Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007600001 Vitis vinifera HOM05D000460 ORTHO05D034790 6.0e-79 297.4 141 100.0
Atru.chr9.2614 Acer truncatum HOM05D000460 ORTHO05D000333 2.4e-19 99.4 80 62.5
MD14G1168100 Malus domestica HOM05D000460 ORTHO05D000333 1.5e-18 96.7 79 59.5
TAR374G1026 Trochodendron aralioides HOM05D000460 ORTHO05D000333 5.0e-17 91.7 81 59.3
Dinv11131 Davidia involucrata HOM05D000460 ORTHO05D000333 6.5e-17 91.3 79 62.0
Actinidia11914 Actinidia chinensis HOM05D000460 ORTHO05D000333 1.2e-15 87.0 79 55.7
CiPaw.11G015300 Carya illinoinensis HOM05D000460 ORTHO05D000333 3.6e-15 85.5 80 55.0
CiPaw.12G032800 Carya illinoinensis HOM05D000460 ORTHO05D000333 3.6e-15 85.5 84 50.0
Aqoxy5G03690 Aquilegia oxysepala HOM05D000460 ORTHO05D000333 1.0e-14 84.0 76 56.6
RcHm_v2.0_Chr7g0192071 Rosa chinensis HOM05D000460 ORTHO05D000333 1.0e-14 84.0 80 53.8
ClCG06G017490 Citrullus lanatus HOM05D000460 ORTHO05D000333 3.0e-14 82.4 82 50.0
Haze_07622 Corylus avellana HOM05D000460 ORTHO05D000333 3.0e-14 82.4 83 53.0
FAN13G1559 Fragaria x ananassa HOM05D000460 ORTHO05D000333 3.0e-14 82.4 77 53.2
Glyma.06G175600 Glycine max HOM05D000460 ORTHO05D000333 3.9e-14 82.0 69 62.3
Cfa019262 Carpinus fangiana HOM05D000460 ORTHO05D000333 6.7e-14 81.3 83 53.0
Cpa.g.sc4.17 Carica papaya HOM05D000460 ORTHO05D000333 1.1e-13 80.5 101 44.6
Thecc.03G117700 Theobroma cacao HOM05D000460 ORTHO05D000333 1.1e-13 80.5 79 57.0
VMungo1309G2015 Vigna mungo HOM05D000460 ORTHO05D000333 2.0e-13 79.7 101 46.5
Cc04_g11120 Coffea canephora HOM05D000460 ORTHO05D000333 7.4e-13 77.8 81 51.9
Psat5g117760 Pisum sativum HOM05D000460 ORTHO05D000333 3.7e-12 75.5 70 54.3
Ciclev10023980m.g Citrus clementina HOM05D000460 ORTHO05D034790 4.8e-12 75.1 41 85.4
MELO3C026248.2 Cucumis melo HOM05D000460 ORTHO05D000333 6.3e-12 74.7 80 47.5
CsaV3_1G000960 Cucumis sativus L. HOM05D000460 ORTHO05D000333 6.3e-12 74.7 80 46.2
Duzib084G0765 Durio zibethinus HOM05D000460 ORTHO05D000333 6.3e-12 74.7 80 51.2
TPR.G35606 Trifolium pratense HOM05D000460 ORTHO05D000333 8.2e-12 74.3 79 49.4
PGR083G0555 Punica granatum HOM05D000460 ORTHO05D000333 3.1e-11 72.4 103 41.7
Lj1g0020730 Lotus japonicus HOM05D000460 ORTHO05D000333 4.1e-11 72.0 76 50.0
Sed0004177 Sechium edule HOM05D000460 ORTHO05D000333 4.1e-11 72.0 79 45.6
FvH4_5g06630 Fragaria vesca HOM05D000460 ORTHO05D000333 5.3e-11 71.6 113 39.8
FAN18G1210 Fragaria x ananassa HOM05D000460 ORTHO05D000333 5.3e-11 71.6 85 49.4
Nitab4.5_0000510g0190 Nicotiana tabacum HOM05D000631 ORTHO05D000524 5.3e-11 71.6 66 60.6
Ca_16117_v3 Cicer arietinum L. HOM05D000631 ORTHO05D000333 9.1e-11 70.9 43 74.4
Solyc03g111860.1 Solanum lycopersicum HOM05D000460 ORTHO05D000333 9.1e-11 70.9 68 52.9
arahy.Tifrunner.gnm1.ann1.UC6Z3J Arachis hypogaea HOM05D000460 ORTHO05D000333 2.0e-10 69.7 78 47.4
Migut.D02017 Erythranthe guttata HOM05D000460 ORTHO05D000333 2.6e-10 69.3 70 48.6
MBI06_g02305_MAGBIO Magnolia biondii HOM05D000460 ORTHO05D000333 2.6e-10 69.3 65 53.8
Sopen03g030980 Solanum pennellii HOM05D000460 ORTHO05D000333 2.6e-10 69.3 68 52.9
ATR0199G041 Amborella trichopoda HOM05D000460 ORTHO05D000333 3.5e-10 68.9 46 67.4
FAN08G3329 Fragaria x ananassa HOM05D000460 ORTHO05D000333 4.5e-10 68.6 85 48.2
FvH4_5g06621 Fragaria vesca HOM05D000460 ORTHO05D000333 5.9e-10 68.2 50 68.0
Gohir.D12G188900 Gossypium hirsutum HOM05D000460 ORTHO05D000333 5.9e-10 68.2 80 48.8
Gorai.008G202800 Gossypium raimondii HOM05D000460 ORTHO05D000333 5.9e-10 68.2 80 48.8
Nn3g16659 Nelumbo nucifera HOM05D000460 ORTHO05D000333 5.9e-10 68.2 44 68.2
SGA_v2.0_scaffold7G04167 Striga asiatica HOM05D000527 ORTHO05D000559 5.9e-10 68.2 80 48.8
Peaxi162Scf00089g00119 Petunia axillaris HOM05D000460 ORTHO05D000333 7.7e-10 67.8 67 52.2
Phvul.009G171700 Phaseolus vulgaris HOM05D000460 ORTHO05D000333 1.7e-09 66.6 69 52.2
MSTRG.9697 Avicennia marina HOM05D000460 ORTHO05D000333 2.2e-09 66.2 83 47.0
COL.COLO4_37783 Corchorus olitorius HOM05D000460 ORTHO05D000333 2.2e-09 66.2 45 68.9
Lalb_Chr08g0236841 Lupinus albus HOM05D000460 ORTHO05D000333 2.9e-09 65.9 79 45.6
CAN.G126.87 Capsicum annuum HOM05D000460 ORTHO05D000333 8.5e-09 64.3 78 47.4
EL10Ac7g15807 Beta vulgaris HOM05D000460 ORTHO05D000333 1.5e-08 63.5 79 45.6
ECA247G1548 Erigeron canadensis HOM05D000631 ORTHO05D000524 1.5e-08 63.5 41 68.3
PGSC0003DMG400015152 Solanum tuberosum HOM05D000631 ORTHO05D000524 1.5e-08 63.5 50 60.0
CANSAT80G1648 Cannabis sativa HOM05D000460 ORTHO05D000333 2.5e-08 62.8 70 48.6
unitig_32.g11035 Utricularia gibba HOM05D000460 ORTHO05D000333 4.2e-08 62.0 65 52.3
HPP92_009925 Vanilla planifolia HOM05D000460 ORTHO05D000333 7.2e-08 61.2 70 47.1
Lsat_1_v5_gn_1_28580 Lactuca sativa HOM05D000460 ORTHO05D000333 1.6e-07 60.1 43 62.8
PSO017G7066 Papaver somniferum HOM05D000460 ORTHO05D000333 4.7e-07 58.5 43 58.1
CDE09G0796 Ceratophyllum demersum HOM05D000460 ORTHO05D000333 6.1e-07 58.2 76 46.1
Nitab4.5_0003542g0120 Nicotiana tabacum HOM05D000460 ORTHO05D034790 8.0e-07 57.8 62 58.1
Psat6g145920 Pisum sativum HOM05D000460 ORTHO05D000333 1.0e-06 57.4 80 46.2
Peaxi162Scf00064g00062 Petunia axillaris HOM05D000460 ORTHO05D000333 4.0e-06 55.5 64 39.1


User provided reference genes

Program Settings