Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007444001 Vitis vinifera HOM05D004917 ORTHO05D005954 3.5e-146 521.5 256 100.0
GSVIVG01004399001 Vitis vinifera HOM05D004917 ORTHO05D005954 2.4e-110 402.5 257 77.4
Actinidia16409 Actinidia chinensis HOM05D004917 ORTHO05D005954 1.5e-99 366.7 248 73.0
Hma1.2p1_0424F.1_g150480 Hydrangea macrophylla HOM05D004917 ORTHO05D005954 1.9e-99 366.3 259 70.7
Atru.chr3.1060 Acer truncatum HOM05D004917 ORTHO05D005954 2.7e-98 362.5 263 68.4
TAR628G1580 Trochodendron aralioides HOM05D004917 ORTHO05D005954 2.3e-97 359.4 259 71.0
Cpa.g.sc673.2 Carica papaya HOM05D004917 ORTHO05D005954 2.0e-96 356.3 258 69.0
Potri.014G012100 Populus trichocarpa HOM05D004917 ORTHO05D005954 2.0e-96 356.3 261 67.0
CiPaw.01G001900 Carya illinoinensis HOM05D004917 ORTHO05D005954 9.8e-96 354.0 226 75.2
QL06p038930 Quercus lobata HOM05D004917 ORTHO05D005954 9.8e-96 354.0 270 64.1
Prupe.6G216800 Prunus persica HOM05D004917 ORTHO05D005954 1.3e-95 353.6 269 68.8
Manes.13G109000 Manihot esculenta HOM05D004917 ORTHO05D005954 1.7e-95 353.2 239 71.5
Sabra14G0006700 Salix brachista HOM05D004917 ORTHO05D005954 2.2e-95 352.8 260 66.5
Ca_22095_v3 Cicer arietinum L. HOM05D004917 ORTHO05D005954 3.7e-95 352.1 206 80.1
Ciclev10026314m.g Citrus clementina HOM05D004917 ORTHO05D005954 1.8e-94 349.7 234 73.9
FAN26G0787 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.4e-94 349.4 261 68.2
FvH4_1g18250 Fragaria vesca HOM05D004917 ORTHO05D005954 5.4e-94 348.2 261 69.3
Thecc.01G076300 Theobroma cacao HOM05D004917 ORTHO05D005954 5.4e-94 348.2 261 67.0
FAN23G1748 Fragaria x ananassa HOM05D004917 ORTHO05D005954 7.0e-94 347.8 260 68.8
TWI74G1062 Tripterygium wilfordii HOM05D004917 ORTHO05D005954 9.1e-94 347.4 222 72.5
Rhsim08G0090300 Rhododendron simsii HOM05D004917 ORTHO05D005954 1.2e-93 347.1 237 72.2
Cfa004388 Carpinus fangiana HOM05D004917 ORTHO05D005954 1.6e-93 346.7 260 68.1
PGSC0003DMG400003322 Solanum tuberosum HOM05D004917 ORTHO05D005954 1.6e-93 346.7 238 68.9
RcHm_v2.0_Chr2g0108761 Rosa chinensis HOM05D004917 ORTHO05D005954 2.0e-93 346.3 268 68.3
FvH4_1g18230 Fragaria vesca HOM05D004917 ORTHO05D005954 3.5e-93 345.5 260 68.8
FAN19G0182 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.5e-93 345.5 260 68.8
MD02G1189600 Malus domestica HOM05D004917 ORTHO05D005954 3.5e-93 345.5 265 67.5
COL.COLO4_11616 Corchorus olitorius HOM05D004917 ORTHO05D005954 4.5e-93 345.1 258 67.8
VMungo0251G1412 Vigna mungo HOM05D004917 ORTHO05D005954 5.9e-93 344.7 255 66.7
Duzib147G0189 Durio zibethinus HOM05D004917 ORTHO05D005954 1.3e-92 343.6 232 72.4
Eucgr.H02332 Eucalyptus grandis HOM05D004917 ORTHO05D005954 1.3e-92 343.6 226 71.2
vmacro18012 Vaccinium macrocarpon HOM05D004917 ORTHO05D005954 1.7e-92 343.2 240 71.2
RcHm_v2.0_Chr2g0108751 Rosa chinensis HOM05D004917 ORTHO05D005954 2.9e-92 342.4 260 69.2
Sopen02g014680 Solanum pennellii HOM05D004917 ORTHO05D005954 1.1e-91 340.5 223 71.3
Cc07_g07360 Coffea canephora HOM05D004917 ORTHO05D005954 1.9e-91 339.7 219 72.6
CAN.G775.1 Capsicum annuum HOM05D004917 ORTHO05D005954 2.5e-91 339.3 241 67.6
Phvul.003G232900 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 2.5e-91 339.3 255 65.9
Glyma.17G158500 Glycine max HOM05D004917 ORTHO05D005954 4.2e-91 338.6 256 66.8
COL.COLO4_11615 Corchorus olitorius HOM05D004917 ORTHO05D005954 7.2e-91 337.8 261 64.4
Gohir.A10G089200 Gossypium hirsutum HOM05D004917 ORTHO05D005954 9.5e-91 337.4 242 68.2
Lj4g0024725 Lotus japonicus HOM05D004917 ORTHO05D005954 9.5e-91 337.4 265 64.2
Medtr4g097500 Medicago truncatula HOM05D004917 ORTHO05D005954 9.5e-91 337.4 240 67.1
Sc07g0000430 Simmondsia chinensis HOM05D004917 ORTHO05D005954 1.2e-90 337.0 260 66.9
CANSAT01G2436 Cannabis sativa HOM05D004917 ORTHO05D005954 1.6e-90 336.7 201 78.1
VMungo0251G2665 Vigna mungo HOM05D004917 ORTHO05D005954 2.1e-90 336.3 255 65.9
Gohir.D10G098900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 4.7e-90 335.1 242 67.4
Gorai.011G108500 Gossypium raimondii HOM05D004917 ORTHO05D005954 4.7e-90 335.1 242 67.8
Nn5g30667 Nelumbo nucifera HOM05D004917 ORTHO05D005954 4.7e-90 335.1 262 67.6
Psat4g080360 Pisum sativum HOM05D004917 ORTHO05D005954 4.7e-90 335.1 198 77.3
Thecc.01G076400 Theobroma cacao HOM05D004917 ORTHO05D005954 4.7e-90 335.1 258 65.5
CsaV3_2G016370 Cucumis sativus L. HOM05D004917 ORTHO05D005954 1.4e-89 333.6 245 68.6
Eucgr.H02333 Eucalyptus grandis HOM05D004917 ORTHO05D005954 1.4e-89 333.6 263 65.8
Glyma.17G158400 Glycine max HOM05D004917 ORTHO05D005954 1.8e-89 333.2 254 65.7
FAN19G2004 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.3e-89 332.8 252 69.4
Sed0017274 Sechium edule HOM05D004917 ORTHO05D005954 2.3e-89 332.8 249 65.1
Gorai.008G085700 Gossypium raimondii HOM05D004917 ORTHO05D005954 4.0e-89 332.0 252 63.1
EL10Ac6g15593 Beta vulgaris HOM05D004917 ORTHO05D005954 6.8e-89 331.3 237 67.9
PSO017G2968 Papaver somniferum HOM05D004917 ORTHO05D005954 6.8e-89 331.3 265 67.5
Aqoxy1G00260 Aquilegia oxysepala HOM05D004917 ORTHO05D005954 3.4e-88 328.9 213 73.2
Gohir.D12G076900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 1.7e-87 326.6 202 72.8
arahy.Tifrunner.gnm1.ann1.1K25L2 Arachis hypogaea HOM05D004917 ORTHO05D005954 3.7e-87 325.5 259 64.5
Lsat_1_v5_gn_4_160020 Lactuca sativa HOM05D004917 ORTHO05D005954 3.7e-87 325.5 261 61.7
SalBow5G1886 Salvia bowleyana HOM05D004917 ORTHO05D005954 4.9e-87 325.1 250 65.2
Phvul.003G232800 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 6.3e-87 324.7 253 64.8
PGR102G2131 Punica granatum HOM05D004917 ORTHO05D005954 6.3e-87 324.7 253 61.7
HanXRQChr09g0262071 Helianthus annuus HOM05D004917 ORTHO05D005954 2.4e-86 322.8 202 72.8
arahy.Tifrunner.gnm1.ann1.UB5R5Q Arachis hypogaea HOM05D004917 ORTHO05D005954 3.1e-86 322.4 259 64.5
PSO170G3850 Papaver somniferum HOM05D004917 ORTHO05D005954 2.7e-85 319.3 264 65.9
ECA232G4556 Erigeron canadensis HOM05D004917 ORTHO05D005954 5.9e-85 318.2 242 64.9
DCAR_014953 Daucus carota HOM05D004917 ORTHO05D005954 1.3e-84 317.0 225 69.3
Ah.03g140710 Amaranthus hybridus HOM05D004917 ORTHO05D005954 2.3e-84 316.2 219 70.3
ClCG02G012210 Citrullus lanatus HOM05D004917 ORTHO05D005954 2.9e-84 315.8 262 63.4
AL8G43550 Arabidopsis lyrata HOM05D004917 ORTHO05D005954 8.6e-84 314.3 233 63.9
Migut.L00432 Erythranthe guttata HOM05D004917 ORTHO05D005954 8.6e-84 314.3 245 64.9
Thhalv10004770m.g Eutrema salsugineum HOM05D004917 ORTHO05D005954 1.5e-83 313.5 199 70.9
Sp2g28930 Schrenkiella parvula HOM05D004917 ORTHO05D005954 4.3e-83 312.0 197 71.6
Lalb_Chr11g0075991 Lupinus albus HOM05D004917 ORTHO05D005954 5.6e-83 311.6 235 66.8
AT5G65840 Arabidopsis thaliana HOM05D004917 ORTHO05D005954 9.5e-83 310.8 197 71.6
Carub.0008s2673 Capsella rubella HOM05D004917 ORTHO05D005954 6.1e-82 308.1 199 70.4
FvH4_1g18251 Fragaria vesca HOM05D004917 ORTHO05D005954 6.1e-82 308.1 199 72.9
AUR62007540 Chenopodium quinoa HOM05D004917 ORTHO05D005954 1.0e-81 307.4 190 74.7
THA.LOC104827747 Tarenaya hassleriana HOM05D004917 ORTHO05D005954 1.4e-81 307.0 249 59.8
PSO170G3322 Papaver somniferum HOM05D004917 ORTHO05D005954 1.8e-81 306.6 199 72.4
Os03g0729200 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 4.0e-81 305.4 199 70.4
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 8.9e-81 304.3 262 60.3
CARHR279840 Cardamine hirsuta HOM05D004917 ORTHO05D005954 1.2e-80 303.9 262 58.4
AUR62004032 Chenopodium quinoa HOM05D004917 ORTHO05D005954 2.0e-80 303.1 190 74.7
Lj4A165T49 Lonicera japonica HOM05D004917 ORTHO05D005954 2.0e-80 303.1 262 62.2
PSO017G2694 Papaver somniferum HOM05D004917 ORTHO05D005954 2.6e-80 302.8 190 73.7
Zm00001eb215580 Zea mays HOM05D004917 ORTHO05D005954 2.6e-80 302.8 241 62.2
Haze_15025 Corylus avellana HOM05D004917 ORTHO05D005954 4.4e-80 302.0 260 61.9
FAN26G1896 Fragaria x ananassa HOM05D004917 ORTHO05D005954 7.5e-80 301.2 260 62.7
FAN28G2407 Fragaria x ananassa HOM05D004917 ORTHO05D005954 7.5e-80 301.2 236 65.7
PSO170G4503 Papaver somniferum HOM05D004917 ORTHO05D005954 7.5e-80 301.2 201 73.1
BcaB04g20033 Brassica carinata HOM05D004917 ORTHO05D005954 1.3e-79 300.4 204 67.6
BcaB04g20036 Brassica carinata HOM05D004917 ORTHO05D005954 1.3e-79 300.4 204 67.6
C09p10750 Brassica napus HOM05D004917 ORTHO05D005954 1.3e-79 300.4 199 68.8
BraA09t36573Z Brassica rapa HOM05D004917 ORTHO05D005954 1.7e-79 300.1 259 59.1
A09p09210 Brassica napus HOM05D004917 ORTHO05D005954 2.9e-79 299.3 218 64.2
CSS0005558 Camellia sinensis var. sinensis HOM05D004917 ORTHO05D005954 2.9e-79 299.3 257 59.9
MELO3C020846.2 Cucumis melo HOM05D004917 ORTHO05D005954 4.9e-79 298.5 244 62.3
PSO017G4293 Papaver somniferum HOM05D004917 ORTHO05D005954 1.4e-78 297.0 199 71.9
ATR0739G130 Amborella trichopoda HOM05D004917 ORTHO05D005954 1.9e-78 296.6 193 71.5
BcaC04g23243 Brassica carinata HOM05D004917 ORTHO05D005954 2.4e-78 296.2 194 68.0
SGA_v2.0_scaffold79G25603 Striga asiatica HOM05D004917 ORTHO05D005954 3.2e-78 295.8 242 62.8
BolC9t53970H Brassica oleracea HOM05D004917 ORTHO05D005954 4.1e-78 295.4 194 68.0
SEGI_14750 Sequoiadendron giganteum HOM05D004917 ORTHO05D005954 4.1e-78 295.4 206 68.0
GSVIVG01007167001 Vitis vinifera HOM05D004917 ORTHO05D005954 6.0e-77 291.6 156 94.9
Oeu013341.1 Olea europaea HOM05D004917 ORTHO05D005954 1.7e-76 290.0 157 84.7
GSVIVG01007168001 Vitis vinifera HOM05D004917 ORTHO05D005954 5.0e-76 288.5 160 84.4
Migut.L00430 Erythranthe guttata HOM05D004917 ORTHO05D005954 8.6e-76 287.7 190 72.6
RcHm_v2.0_Chr2g0108771 Rosa chinensis HOM05D004917 ORTHO05D005954 2.5e-75 286.2 203 69.0
Nitab4.5_0000036g0150 Nicotiana tabacum HOM05D004917 ORTHO05D005954 2.1e-74 283.1 161 80.1
DCAR_000455 Daucus carota HOM05D004917 ORTHO05D005954 4.7e-74 282.0 167 77.8
Peaxi162Scf00449g00417 Petunia axillaris HOM05D004917 ORTHO05D005954 1.1e-73 280.8 231 62.3
Dinv26959 Davidia involucrata HOM05D004917 ORTHO05D005954 6.8e-73 278.1 210 66.7
Os03g0729300 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 1.5e-72 276.9 250 57.2
CDE02G4371 Ceratophyllum demersum HOM05D004917 ORTHO05D005954 2.9e-71 272.7 196 64.8
Nitab4.5_0007379g0030 Nicotiana tabacum HOM05D004917 ORTHO05D005954 2.3e-68 263.1 263 53.2
MBI16_g06077_MAGBIO Magnolia biondii HOM05D004917 ORTHO05D005954 5.1e-60 235.3 252 55.6
Pp3c27_7100 Physcomitrium patens HOM05D004917 ORTHO05D005954 3.1e-57 226.1 182 52.7
Hund16417 Selenicereus undatus HOM05D004917 ORTHO05D005954 1.5e-56 223.8 143 75.5
GSVIVG01004400001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.7e-55 220.3 103 100.0
Zm00001eb056030 Zea mays HOM05D004917 ORTHO05D005954 1.4e-54 217.2 131 74.0
unitig_37.g11996 Utricularia gibba HOM05D004917 ORTHO05D005954 3.2e-54 216.1 167 62.9
AagrBONN_evm.TU.Sc2ySwM_368.1530 Anthoceros agrestis HOM05D004917 ORTHO05D005954 2.0e-48 196.8 234 44.0
FAN23G2689 Fragaria x ananassa HOM05D004917 ORTHO05D005954 7.1e-46 188.3 156 64.7
QL06p038908 Quercus lobata HOM05D004917 ORTHO05D005954 1.0e-44 184.5 102 81.4
ATR0739G160 Amborella trichopoda HOM05D004917 ORTHO05D005954 5.1e-36 155.6 108 65.7
QL02p069743 Quercus lobata HOM05D004917 ORTHO05D005954 4.5e-32 142.5 94 69.1
FAN28G0406 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.8e-31 139.4 101 68.3
QL06p038910 Quercus lobata HOM05D004917 ORTHO05D005954 3.8e-31 139.4 91 69.2
FAN26G2723 Fragaria x ananassa HOM05D004917 ORTHO05D005954 7.9e-29 131.7 198 38.9
GSVIVG01007445001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.1e-25 121.3 107 61.7
MCO14G127 Micromonas commoda HOM05D004917 ORTHO05D005954 9.3e-22 108.2 162 37.0
Carub.0004s1915 Capsella rubella HOM05D007024 ORTHO05D008865 2.1e-21 107.1 198 33.8
Sabra07G0005500 Salix brachista HOM05D004917 ORTHO05D005954 8.7e-20 101.7 151 43.7
SMO353G0397 Selaginella moellendorffii HOM05D007024 ORTHO05D008865 1.5e-19 100.9 178 37.1
Potri.007G007201 Populus trichocarpa HOM05D004917 ORTHO05D005954 1.9e-19 100.5 69 69.6
arahy.Tifrunner.gnm1.ann1.F27BB1 Arachis hypogaea HOM05D004917 ORTHO05D005954 1.5e-16 90.9 53 81.1
PRCOL_00004664 Prasinoderma coloniale HOM05D004917 ORTHO05D005954 1.3e-15 87.8 141 37.6
Zm00001eb030360 Zea mays HOM05D004917 ORTHO05D005954 2.9e-15 86.7 182 38.5
CDE04G0730 Ceratophyllum demersum HOM05D007024 ORTHO05D008865 8.5e-15 85.1 209 32.1
AagrBONN_evm.TU.Sc2ySwM_344.3825 Anthoceros agrestis HOM05D007024 ORTHO05D008865 2.5e-14 83.6 120 37.5
MCO06G061 Micromonas commoda HOM05D004917 ORTHO05D005954 6.1e-13 79.0 131 35.9
Gohir.A12G080465 Gossypium hirsutum HOM05D004917 ORTHO05D005954 2.0e-11 73.9 107 40.2
Cre17.g697050 Chlamydomonas reinhardtii HOM05D004917 ORTHO05D005954 5.7e-11 72.4 251 24.7
ATR0739G073 Amborella trichopoda HOM05D004917 ORTHO05D005954 3.1e-09 66.6 52 53.8
Haze_02356 Corylus avellana HOM05D004917 ORTHO05D005954 2.0e-08 63.9 50 68.0
MCO07G374 Micromonas commoda HOM05D004917 ORTHO05D005954 5.0e-07 59.3 82 40.2
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 5.0e-07 59.3 110 33.6


User provided reference genes

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