Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007430001 Vitis vinifera HOM05D004979 ORTHO05D006190 4.4e-155 551.2 272 100.0
GSVIVG01007210001 Vitis vinifera HOM05D004979 ORTHO05D006190 2.1e-112 409.5 220 91.8
Manes.08G106500 Manihot esculenta HOM05D004979 ORTHO05D006190 1.4e-87 327.0 210 74.3
Cc02_g36100 Coffea canephora HOM05D004979 ORTHO05D006190 2.3e-87 326.2 208 73.1
Cc02_g36050 Coffea canephora HOM05D004979 ORTHO05D006190 3.0e-87 325.9 208 73.1
CSS0020951 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 5.7e-86 321.6 207 72.9
CSS0020926 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 7.5e-86 321.2 207 72.9
TPR.G18815 Trifolium pratense HOM05D004979 ORTHO05D006190 5.9e-83 311.6 206 69.9
arahy.Tifrunner.gnm1.ann1.Q958TZ Arachis hypogaea HOM05D004979 ORTHO05D006190 1.0e-82 310.8 211 67.3
TAR636G2920 Trochodendron aralioides HOM05D004979 ORTHO05D006190 1.0e-82 310.8 209 72.7
arahy.Tifrunner.gnm1.ann1.4I4LKP Arachis hypogaea HOM05D004979 ORTHO05D006190 1.7e-82 310.1 206 69.4
TPR.G33173 Trifolium pratense HOM05D004979 ORTHO05D006190 1.7e-82 310.1 206 69.9
Oeu061912.1 Olea europaea HOM05D004979 ORTHO05D006190 2.9e-82 309.3 207 72.0
Potri.013G000600 Populus trichocarpa HOM05D004979 ORTHO05D006190 5.0e-82 308.5 215 68.4
FAN10G2429 Fragaria x ananassa HOM05D004979 ORTHO05D006190 8.5e-82 307.8 206 71.8
Psat6g226240 Pisum sativum HOM05D004979 ORTHO05D006190 2.5e-81 306.2 215 66.0
RcHm_v2.0_Chr1g0332651 Rosa chinensis HOM05D004979 ORTHO05D006190 2.5e-81 306.2 205 71.2
FAN01G0279 Fragaria x ananassa HOM05D004979 ORTHO05D006190 3.2e-81 305.8 205 71.7
FAN06G2997 Fragaria x ananassa HOM05D004979 ORTHO05D006190 3.2e-81 305.8 205 71.7
MD08G1246100 Malus domestica HOM05D004979 ORTHO05D006190 9.4e-81 304.3 204 72.5
Medtr1g110490 Medicago truncatula HOM05D004979 ORTHO05D006190 9.4e-81 304.3 206 67.5
FAN23G0202 Fragaria x ananassa HOM05D004979 ORTHO05D006190 3.6e-80 302.4 210 70.5
Sabra13G0000500 Salix brachista HOM05D004979 ORTHO05D006190 3.6e-80 302.4 215 67.9
Sed0004859 Sechium edule HOM05D004979 ORTHO05D006190 3.6e-80 302.4 208 69.7
PGR117G0001 Punica granatum HOM05D004979 ORTHO05D006190 6.1e-80 301.6 205 69.8
MSTRG.16439 Avicennia marina HOM05D004979 ORTHO05D006190 1.0e-79 300.8 210 68.6
EL10Ac8g20414 Beta vulgaris HOM05D004979 ORTHO05D006190 1.0e-79 300.8 205 69.3
Ciclev10028175m.g Citrus clementina HOM05D004979 ORTHO05D006190 1.8e-79 300.1 220 66.4
Nitab4.5_0002303g0020 Nicotiana tabacum HOM05D004979 ORTHO05D006190 2.3e-79 299.7 210 69.5
Actinidia22849 Actinidia chinensis HOM05D004979 ORTHO05D006190 3.0e-79 299.3 207 69.1
Migut.B00894 Erythranthe guttata HOM05D004979 ORTHO05D006190 4.0e-79 298.9 207 67.6
PGR004G0062 Punica granatum HOM05D004979 ORTHO05D006190 6.8e-79 298.1 205 68.8
Eucgr.I02672 Eucalyptus grandis HOM05D004979 ORTHO05D006190 8.8e-79 297.7 205 69.8
SGA_v2.0_scaffold279G46769 Striga asiatica HOM05D004979 ORTHO05D006190 1.2e-78 297.4 219 64.4
Sc05g0004380 Simmondsia chinensis HOM05D004979 ORTHO05D006190 2.6e-78 296.2 202 68.8
Glyma.20G116900 Glycine max HOM05D004979 ORTHO05D006190 7.5e-78 294.7 206 65.5
Lj5g0020513 Lotus japonicus HOM05D004979 ORTHO05D006190 7.5e-78 294.7 206 65.5
Nitab4.5_0000081g0190 Nicotiana tabacum HOM05D004979 ORTHO05D006190 7.5e-78 294.7 209 68.9
CiPaw.01G000500 Carya illinoinensis HOM05D004979 ORTHO05D006190 1.7e-77 293.5 208 68.8
MELO3C019579.2 Cucumis melo HOM05D004979 ORTHO05D006190 1.7e-77 293.5 208 67.3
unitig_22.g6127 Utricularia gibba HOM05D004979 ORTHO05D006190 1.7e-77 293.5 212 65.6
Glyma.10G273100 Glycine max HOM05D004979 ORTHO05D006190 2.2e-77 293.1 206 65.5
CARHR054720 Cardamine hirsuta HOM05D004979 ORTHO05D006190 3.7e-77 292.4 218 63.3
AL1G67180 Arabidopsis lyrata HOM05D004979 ORTHO05D006190 4.8e-77 292.0 206 65.5
CANSAT56G2810 Cannabis sativa HOM05D004979 ORTHO05D006190 4.8e-77 292.0 205 68.3
Thhalv10023409m.g Eutrema salsugineum HOM05D004979 ORTHO05D006190 6.3e-77 291.6 206 65.0
Carub.0002s0703 Capsella rubella HOM05D004979 ORTHO05D006190 1.1e-76 290.8 206 65.5
MD15G1441300 Malus domestica HOM05D004979 ORTHO05D006190 1.1e-76 290.8 204 68.6
Rhsim04G0165200 Rhododendron simsii HOM05D004979 ORTHO05D006190 4.1e-76 288.9 207 69.1
AT1G57600 Arabidopsis thaliana HOM05D004979 ORTHO05D006190 9.1e-76 287.7 206 64.6
CsaV3_6G013140 Cucumis sativus L. HOM05D004979 ORTHO05D006190 9.1e-76 287.7 208 66.8
Thecc.05G331000 Theobroma cacao HOM05D004979 ORTHO05D006190 1.2e-75 287.3 202 67.3
Atru.chr12.1512 Acer truncatum HOM05D004979 ORTHO05D006190 1.6e-75 287.0 206 67.5
BcaB07g31145 Brassica carinata HOM05D004979 ORTHO05D006190 2.7e-75 286.2 206 65.5
Lj9A238G55 Lonicera japonica HOM05D004979 ORTHO05D006190 2.7e-75 286.2 209 67.9
Lalb_Chr04g0254641 Lupinus albus HOM05D004979 ORTHO05D006190 2.7e-75 286.2 206 63.6
TWI60G1029 Tripterygium wilfordii HOM05D004979 ORTHO05D006190 4.5e-75 285.4 205 66.3
Sp2g05910 Schrenkiella parvula HOM05D004979 ORTHO05D006190 7.7e-75 284.6 219 61.6
SpUn0028_0030 Schrenkiella parvula HOM05D004979 ORTHO05D006190 7.7e-75 284.6 219 61.6
Aqoxy1G02435 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 1.3e-74 283.9 218 63.8
VMungo0720G1588 Vigna mungo HOM05D004979 ORTHO05D006190 1.3e-74 283.9 206 61.7
BraA09t37507Z Brassica rapa HOM05D004979 ORTHO05D006190 1.9e-73 280.0 206 64.1
PGSC0003DMG400001886 Solanum tuberosum HOM05D004979 ORTHO05D006190 3.2e-73 279.3 201 69.2
BolC9t55284H Brassica oleracea HOM05D004979 ORTHO05D006190 7.2e-73 278.1 204 64.7
Solyc04g055190.4 Solanum lycopersicum HOM05D004979 ORTHO05D006190 1.2e-72 277.3 201 68.7
A09p18870 Brassica napus HOM05D004979 ORTHO05D006190 2.7e-72 276.2 206 63.1
BcaC04g22085 Brassica carinata HOM05D004979 ORTHO05D006190 3.6e-72 275.8 204 63.7
C09p23650 Brassica napus HOM05D004979 ORTHO05D006190 3.6e-72 275.8 204 63.7
Nn7g38157 Nelumbo nucifera HOM05D004979 ORTHO05D006190 3.6e-72 275.8 209 63.6
PSO357G0276 Papaver somniferum HOM05D004979 ORTHO05D006190 3.6e-72 275.8 206 64.6
Phvul.007G028500 Phaseolus vulgaris HOM05D004979 ORTHO05D006190 3.6e-72 275.8 206 61.7
PSO170G1924 Papaver somniferum HOM05D004979 ORTHO05D006190 4.7e-72 275.4 206 64.1
CAN.G756.6 Capsicum annuum HOM05D004979 ORTHO05D006190 8.0e-72 274.6 201 67.7
THA.LOC104816839 Tarenaya hassleriana HOM05D004979 ORTHO05D006190 1.0e-71 274.2 206 63.1
Dinv24526 Davidia involucrata HOM05D004979 ORTHO05D006190 1.8e-71 273.5 209 63.6
AUR62014845 Chenopodium quinoa HOM05D004979 ORTHO05D006190 3.0e-71 272.7 212 63.7
QL03p011287 Quercus lobata HOM05D004979 ORTHO05D006190 3.0e-71 272.7 218 62.4
Gohir.D13G003600 Gossypium hirsutum HOM05D004979 ORTHO05D006190 3.4e-70 269.2 217 61.3
Duzib114G0072 Durio zibethinus HOM05D004979 ORTHO05D006190 5.7e-70 268.5 198 67.7
Gohir.A13G003700 Gossypium hirsutum HOM05D004979 ORTHO05D006190 9.8e-70 267.7 203 64.0
CAN.G1715.7 Capsicum annuum HOM05D004979 ORTHO05D006190 2.8e-69 266.2 198 67.7
Gorai.013G003500 Gossypium raimondii HOM05D004979 ORTHO05D006190 4.9e-69 265.4 218 61.5
Rhsim01G0213000 Rhododendron simsii HOM05D004979 ORTHO05D006190 1.4e-68 263.8 207 66.2
Hund05397 Selenicereus undatus HOM05D004979 ORTHO05D006190 2.4e-68 263.1 176 71.6
Zm00001eb108680 Zea mays HOM05D004979 ORTHO05D006190 1.9e-65 253.4 205 60.0
Haze_12430 Corylus avellana HOM05D004979 ORTHO05D006190 2.5e-65 253.1 215 61.9
ATR0730G180 Amborella trichopoda HOM05D004979 ORTHO05D006190 3.3e-65 252.7 210 60.0
ECA234G3247 Erigeron canadensis HOM05D004979 ORTHO05D006190 3.3e-65 252.7 185 64.9
Os05g0144000 Oryza sativa ssp. japonica HOM05D004979 ORTHO05D006190 6.1e-64 248.4 205 58.0
Lsat_1_v5_gn_5_7121 Lactuca sativa HOM05D004979 ORTHO05D006190 5.2e-63 245.4 176 65.9
HanXRQChr11g0327151 Helianthus annuus HOM05D004979 ORTHO05D006190 8.9e-63 244.6 157 73.2
Lj4g0015757 Lotus japonicus HOM05D004979 ORTHO05D006190 1.7e-61 240.4 161 67.7
SEGI_04903 Sequoiadendron giganteum HOM05D004979 ORTHO05D006190 1.7e-61 240.4 214 52.8
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 4.3e-57 225.7 385 39.0
FAN03G1290 Fragaria x ananassa HOM05D004979 ORTHO05D006190 4.7e-56 222.2 223 55.2
Aa31LG2G11270 Aethionema arabicum HOM05D004979 ORTHO05D006190 1.0e-55 221.1 212 53.3
Peaxi162Scf00212g00515 Petunia axillaris HOM05D004979 ORTHO05D006190 8.1e-48 194.9 204 55.9
Mapoly0050s0014 Marchantia polymorpha HOM05D004979 ORTHO05D006190 1.8e-47 193.7 201 47.3
Pp3c2_38270 Physcomitrium patens HOM05D004979 ORTHO05D006190 3.4e-46 189.5 208 45.7
Cpa.g.sc46.2 Carica papaya HOM05D004979 ORTHO05D006190 1.4e-44 184.1 182 54.4
GSVIVG01004371001 Vitis vinifera HOM05D004979 ORTHO05D006190 4.1e-44 182.6 103 93.2
vmacro22232 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 1.0e-42 177.9 232 48.3
SMO145G0201 Selaginella moellendorffii HOM05D004979 ORTHO05D006190 1.3e-42 177.6 190 48.9
ClCG03G002030 Citrullus lanatus HOM05D004979 ORTHO05D006190 2.3e-42 176.8 163 56.4
CBR_g16989 Chara braunii HOM05D004979 ORTHO05D006190 3.4e-38 162.9 198 40.9
DCAR_006591 Daucus carota HOM05D004979 ORTHO05D006190 2.2e-37 160.2 155 55.5
DCAR_032148 Daucus carota HOM05D004979 ORTHO05D006190 2.2e-37 160.2 155 55.5
Prupe.1G583400 Prunus persica HOM05D004979 ORTHO05D006190 2.7e-35 153.3 86 77.9
Dinv22420 Davidia involucrata HOM05D004979 ORTHO05D006190 1.1e-33 147.9 153 54.2
HPP92_023772 Vanilla planifolia HOM05D004979 ORTHO05D006190 1.2e-32 144.4 109 58.7
CDE04G1277 Ceratophyllum demersum HOM05D004979 ORTHO05D006190 1.1e-31 141.4 99 68.7
FvH4_7g05560 Fragaria vesca HOM05D004979 ORTHO05D006190 5.2e-31 139.0 80 75.0
AagrBONN_evm.TU.Sc2ySwM_344.2018 Anthoceros agrestis HOM05D004979 ORTHO05D006190 3.8e-21 106.3 87 51.7
Cre14.g617150 Chlamydomonas reinhardtii HOM05D004979 ORTHO05D006190 1.4e-12 77.8 152 34.2
AagrBONN_evm.TU.Sc2ySwM_117.715 Anthoceros agrestis HOM05D004979 ORTHO05D006190 4.6e-11 72.8 99 41.4
SHI20227 Sapria himalayana HOM05D004979 ORTHO05D006190 3.9e-10 69.7 51 62.7
MBI07_g39750_MAGBIO Magnolia biondii HOM05D004979 ORTHO05D006190 2.8e-08 63.5 43 65.1
Cfa022844 Carpinus fangiana HOM05D004979 ORTHO05D006190 3.7e-08 63.2 235 26.0
PRCOL_00000039 Prasinoderma coloniale HOM05D004979 ORTHO05D006190 8.1e-08 62.0 182 28.6
Medtr3g085120 Medicago truncatula HOM05D002545 ORTHO05D002335 4.5e-06 56.2 104 32.7


User provided reference genes

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