Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 1.1e-70 270.0 147 100.0
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 3.7e-23 112.1 128 54.7
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 5.4e-22 108.2 129 51.9
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 1.6e-21 106.7 129 48.1
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 3.5e-21 105.5 131 46.6
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 1.0e-20 104.0 129 51.9
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 2.9e-20 102.4 136 46.3
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 8.6e-20 100.9 134 46.3
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 1.1e-19 100.5 129 51.2
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 4.2e-19 98.6 127 47.2
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 5.5e-19 98.2 130 46.9
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 1.6e-18 96.7 130 45.4
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 1.6e-18 96.7 132 47.0
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 2.8e-18 95.9 129 50.4
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 4.7e-18 95.1 127 46.5
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 4.7e-18 95.1 127 47.2
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 4.7e-18 95.1 131 43.5
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 6.1e-18 94.7 127 47.2
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.8e-17 93.2 128 48.4
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 4.0e-17 92.0 127 46.5
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 1.2e-16 90.5 125 45.6
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 1.5e-16 90.1 130 45.4
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 1.5e-16 90.1 130 43.8
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 1.5e-16 90.1 126 46.0
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 2.0e-16 89.7 128 46.9
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 4.4e-16 88.6 132 41.7
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.4e-16 88.6 127 44.9
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 4.4e-16 88.6 130 48.5
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 1.3e-15 87.0 127 46.5
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.8e-15 85.9 128 43.8
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 2.8e-15 85.9 131 44.3
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 3.7e-15 85.5 126 42.1
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 1.4e-14 83.6 131 42.0
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 1.4e-14 83.6 119 47.1
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 1.8e-14 83.2 128 41.4
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 9.2e-14 80.9 125 44.8
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 9.2e-14 80.9 125 44.8
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 9.2e-14 80.9 130 43.1
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 1.6e-13 80.1 124 44.4
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 1.6e-13 80.1 128 43.8
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 2.7e-13 79.3 130 38.5
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 4.5e-13 78.6 130 42.3
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 4.5e-13 78.6 125 43.2
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 5.9e-13 78.2 123 45.5
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 7.8e-13 77.8 128 43.0
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 1.0e-12 77.4 121 45.5
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 1.0e-12 77.4 127 38.6
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 1.3e-12 77.0 130 40.8
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 1.3e-12 77.0 130 40.8
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 2.3e-12 76.3 131 42.0
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 2.3e-12 76.3 124 40.3
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 2.9e-12 75.9 127 39.4
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 2.9e-12 75.9 125 40.8
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 3.8e-12 75.5 127 39.4
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 1.1e-11 73.9 122 44.3
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.5e-11 73.6 127 44.1
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 1.9e-11 73.2 152 40.1
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 4.3e-11 72.0 123 38.2
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 5.6e-11 71.6 125 40.8
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 9.5e-11 70.9 152 36.2
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 9.5e-11 70.9 131 40.5
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 9.5e-11 70.9 130 36.9
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 2.1e-10 69.7 130 36.9
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 2.1e-10 69.7 128 35.9
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 3.6e-10 68.9 123 37.4
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 4.7e-10 68.6 131 37.4
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 1.4e-09 67.0 128 35.9
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 3.1e-09 65.9 128 37.5
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 4.0e-09 65.5 129 39.5
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 5.2e-09 65.1 129 36.4
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 5.2e-09 65.1 119 36.1
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 8.9e-09 64.3 124 34.7
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 7.5e-08 61.2 122 36.9
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 1.3e-07 60.5 127 33.1
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 1.1e-06 57.4 89 39.3
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 1.4e-06 57.0 129 38.8
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 2.4e-06 56.2 125 36.0


User provided reference genes

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