Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007268001 Vitis vinifera HOM05D001369 ORTHO05D001235 1.1e-23 112.5 56 100.0
CiPaw.10G075600 Carya illinoinensis HOM05D001369 ORTHO05D001235 3.2e-15 84.3 56 78.6
QL03p008110 Quercus lobata HOM05D001369 ORTHO05D001235 3.2e-15 84.3 56 80.4
QL05p070150 Quercus lobata HOM05D001369 ORTHO05D001235 3.2e-15 84.3 56 80.4
Dinv20116 Davidia involucrata HOM05D001369 ORTHO05D001235 4.1e-15 84.0 59 81.4
Sed0012889 Sechium edule HOM05D001369 ORTHO05D001235 5.4e-15 83.6 56 76.8
CSS0038189 Camellia sinensis var. sinensis HOM05D001369 ORTHO05D001235 2.7e-14 81.3 60 73.3
Cfa000137 Carpinus fangiana HOM05D001369 ORTHO05D001235 2.7e-14 81.3 56 75.0
Haze_06887 Corylus avellana HOM05D001369 ORTHO05D001235 2.7e-14 81.3 56 75.0
CSS0041103 Camellia sinensis var. sinensis HOM05D001369 ORTHO05D001235 3.5e-14 80.9 60 70.0
ClCG01G009820 Citrullus lanatus HOM05D001369 ORTHO05D001235 3.5e-14 80.9 56 73.2
MELO3C021716.2 Cucumis melo HOM05D001369 ORTHO05D001235 7.8e-14 79.7 56 75.0
Actinidia26879 Actinidia chinensis HOM05D001369 ORTHO05D001235 1.3e-13 79.0 64 68.8
Dinv13950 Davidia involucrata HOM05D001369 ORTHO05D001235 1.7e-13 78.6 63 77.8
Cpa.g.sc152.59 Carica papaya HOM05D001369 ORTHO05D001235 3.0e-13 77.8 58 74.1
Nn1g03371 Nelumbo nucifera HOM05D001369 ORTHO05D001235 3.0e-13 77.8 56 71.4
Lj4g0001127 Lotus japonicus HOM05D001369 ORTHO05D001235 5.0e-13 77.0 56 67.9
Sabra04G0001500 Salix brachista HOM05D001369 ORTHO05D001235 5.0e-13 77.0 66 65.2
TAR020G0001 Trochodendron aralioides HOM05D001369 ORTHO05D001235 5.0e-13 77.0 56 75.0
Prupe.4G013700 Prunus persica HOM05D001369 ORTHO05D001235 8.6e-13 76.3 56 73.2
FvH4_3g01270 Fragaria vesca HOM05D001369 ORTHO05D001235 1.1e-12 75.9 58 74.1
FAN21G0839 Fragaria x ananassa HOM05D001369 ORTHO05D001235 1.1e-12 75.9 58 74.1
RcHm_v2.0_Chr5g0001821 Rosa chinensis HOM05D001369 ORTHO05D001235 1.1e-12 75.9 58 74.1
Actinidia39263 Actinidia chinensis HOM05D001369 ORTHO05D001235 1.9e-12 75.1 58 67.2
FAN25G1688 Fragaria x ananassa HOM05D001369 ORTHO05D001235 1.9e-12 75.1 58 74.1
Potri.004G002900 Populus trichocarpa HOM05D001369 ORTHO05D001235 1.9e-12 75.1 66 65.2
Rhsim13G0149100 Rhododendron simsii HOM05D001369 ORTHO05D001235 2.5e-12 74.7 59 69.5
Sabra11G0011100 Salix brachista HOM05D001369 ORTHO05D001235 2.5e-12 74.7 66 65.2
Sabra11G0012900 Salix brachista HOM05D001369 ORTHO05D001235 2.5e-12 74.7 66 65.2
PGSC0003DMG400021460 Solanum tuberosum HOM05D001369 ORTHO05D001235 2.5e-12 74.7 56 71.4
Lalb_Chr18g0056841 Lupinus albus HOM05D001369 ORTHO05D001235 3.3e-12 74.3 59 72.9
Hma1.2p1_0298F.1_g117380 Hydrangea macrophylla HOM05D001369 ORTHO05D001235 4.3e-12 73.9 56 73.2
TAR629G3348 Trochodendron aralioides HOM05D001369 ORTHO05D001235 4.3e-12 73.9 57 73.7
Solyc02g036360.1 Solanum lycopersicum HOM05D001369 ORTHO05D001235 5.6e-12 73.6 56 71.4
Sopen02g011730 Solanum pennellii HOM05D001369 ORTHO05D001235 5.6e-12 73.6 56 71.4
MD10G1328200 Malus domestica HOM05D001369 ORTHO05D001235 7.3e-12 73.2 56 67.9
CAN.G123.6 Capsicum annuum HOM05D001369 ORTHO05D001235 9.5e-12 72.8 58 67.2
MD05G1354100 Malus domestica HOM05D001369 ORTHO05D001235 9.5e-12 72.8 56 67.9
Sc17g0007620 Simmondsia chinensis HOM05D001369 ORTHO05D001235 9.5e-12 72.8 56 64.3
Ca_21056_v3 Cicer arietinum L. HOM05D001369 ORTHO05D001235 1.2e-11 72.4 56 66.1
Ciclev10014348m.g Citrus clementina HOM05D001369 ORTHO05D001235 1.2e-11 72.4 61 67.2
Duzib170G1077 Durio zibethinus HOM05D001369 ORTHO05D001235 1.2e-11 72.4 60 70.0
Manes.17G024482 Manihot esculenta HOM05D001369 ORTHO05D001235 1.6e-11 72.0 65 63.1
Medtr4g132780 Medicago truncatula HOM05D001369 ORTHO05D001235 1.6e-11 72.0 56 67.9
Potri.011G021000 Populus trichocarpa HOM05D001369 ORTHO05D001235 1.6e-11 72.0 66 62.1
SGA_v2.0_scaffold89G27490 Striga asiatica HOM05D001369 ORTHO05D001235 1.6e-11 72.0 60 63.3
EL10Ac8g20143 Beta vulgaris HOM05D001369 ORTHO05D001235 2.8e-11 71.2 59 64.4
Oeu051872.1 Olea europaea HOM05D001369 ORTHO05D001235 2.8e-11 71.2 60 65.0
Oeu051874.1 Olea europaea HOM05D001369 ORTHO05D001235 2.8e-11 71.2 60 65.0
AT1G62390 Arabidopsis thaliana HOM05D001369 ORTHO05D001235 4.7e-11 70.5 66 59.1
Peaxi162Scf00294g00082 Petunia axillaris HOM05D001369 ORTHO05D001235 4.7e-11 70.5 60 63.3
PGSC0003DMG400016728 Solanum tuberosum HOM05D001369 ORTHO05D001235 4.7e-11 70.5 62 62.9
Aa31LG2G100 Aethionema arabicum HOM05D001369 ORTHO05D001235 8.0e-11 69.7 61 62.3
Solyc02g081200.1 Solanum lycopersicum HOM05D001369 ORTHO05D001235 8.0e-11 69.7 62 62.9
Sopen02g025840 Solanum pennellii HOM05D001369 ORTHO05D001235 8.0e-11 69.7 62 62.9
Peaxi162Scf01096g00033 Petunia axillaris HOM05D001369 ORTHO05D001235 1.1e-10 69.3 65 64.6
AUR62012766 Chenopodium quinoa HOM05D001369 ORTHO05D001235 1.4e-10 68.9 60 61.7
DCAR_027852 Daucus carota HOM05D001369 ORTHO05D001235 1.4e-10 68.9 61 63.9
Psat4g003160 Pisum sativum HOM05D001369 ORTHO05D001235 1.4e-10 68.9 56 64.3
MSTRG.13125 Avicennia marina HOM05D001369 ORTHO05D001235 1.8e-10 68.6 63 60.3
Eucgr.D01369 Eucalyptus grandis HOM05D001369 ORTHO05D001235 1.8e-10 68.6 57 66.7
vmacro23323 Vaccinium macrocarpon HOM05D001369 ORTHO05D001235 1.8e-10 68.6 59 66.1
PGR004G2550 Punica granatum HOM05D001369 ORTHO05D001235 2.3e-10 68.2 67 62.7
Rhsim02G0104800 Rhododendron simsii HOM05D001369 ORTHO05D001235 2.3e-10 68.2 58 63.8
TWI63G1289 Tripterygium wilfordii HOM05D001369 ORTHO05D001235 2.3e-10 68.2 57 66.7
Cc09_g01100 Coffea canephora HOM05D001369 ORTHO05D001235 3.1e-10 67.8 62 64.5
CAN.G1014.56 Capsicum annuum HOM05D001369 ORTHO05D001235 4.0e-10 67.4 65 61.5
Nitab4.5_0004694g0030 Nicotiana tabacum HOM05D001369 ORTHO05D001235 4.0e-10 67.4 65 63.1
Actinidia11874 Actinidia chinensis HOM05D001369 ORTHO05D001235 5.2e-10 67.0 53 67.9
Ah.09g234430 Amaranthus hybridus HOM05D001369 ORTHO05D001235 6.8e-10 66.6 58 58.6
Nitab4.5_0000005g0080 Nicotiana tabacum HOM05D001369 ORTHO05D001235 6.8e-10 66.6 65 61.5
Nitab4.5_0004821g0010 Nicotiana tabacum HOM05D001369 ORTHO05D001235 6.8e-10 66.6 63 61.9
BraA06t24143Z Brassica rapa HOM05D001369 ORTHO05D001235 8.9e-10 66.2 56 60.7
THA.LOC104798649 Tarenaya hassleriana HOM05D001369 ORTHO05D001235 1.5e-09 65.5 63 57.1
Oeu007159.1 Olea europaea HOM05D001369 ORTHO05D001235 2.0e-09 65.1 60 63.3
Phvul.003G082400 Phaseolus vulgaris HOM05D001369 ORTHO05D001235 2.0e-09 65.1 63 61.9
Gohir.D13G133400 Gossypium hirsutum HOM05D001369 ORTHO05D001235 2.6e-09 64.7 61 62.3
Lsat_1_v5_gn_5_1660 Lactuca sativa HOM05D001369 ORTHO05D001235 2.6e-09 64.7 71 56.3
Nitab4.5_0008174g0010 Nicotiana tabacum HOM05D001369 ORTHO05D001235 2.6e-09 64.7 66 60.6
A06p09530 Brassica napus HOM05D001369 ORTHO05D001235 3.4e-09 64.3 56 58.9
VMungo1215G1812 Vigna mungo HOM05D001369 ORTHO05D001235 4.4e-09 63.9 63 60.3
Thhalv10006907m.g Eutrema salsugineum HOM05D001369 ORTHO05D001235 9.8e-09 62.8 62 58.1
DCAR_002208 Daucus carota HOM05D001369 ORTHO05D001235 1.7e-08 62.0 62 56.5
Sp2g02220 Schrenkiella parvula HOM05D001369 ORTHO05D001235 2.9e-08 61.2 65 52.3
SEGI_23476 Sequoiadendron giganteum HOM05D001369 ORTHO05D001235 4.9e-08 60.5 56 58.9
Aa31LG1G2720 Aethionema arabicum HOM05D001369 ORTHO05D001235 6.4e-08 60.1 60 56.7
AL2G13500 Arabidopsis lyrata HOM05D001369 ORTHO05D001235 6.4e-08 60.1 70 50.0
Duzib213G0148 Durio zibethinus HOM05D001369 ORTHO05D001235 6.4e-08 60.1 32 84.4
AUR62021891 Chenopodium quinoa HOM05D001369 ORTHO05D001235 8.3e-08 59.7 59 55.9
Migut.H01596 Erythranthe guttata HOM05D001369 ORTHO05D001235 8.3e-08 59.7 31 90.3
TPR.G37095 Trifolium pratense HOM05D001369 ORTHO05D001235 1.1e-07 59.3 56 57.1
ATR0624G073 Amborella trichopoda HOM05D001369 ORTHO05D001235 1.4e-07 58.9 62 54.8
Lalb_Chr20g0119151 Lupinus albus HOM05D001369 ORTHO05D001235 1.9e-07 58.5 33 81.8
unitig_26.g9400 Utricularia gibba HOM05D001369 ORTHO05D001235 3.2e-07 57.8 66 48.5
CARHR012360 Cardamine hirsuta HOM05D001369 ORTHO05D001235 5.4e-07 57.0 66 51.5
PSO541G5015 Papaver somniferum HOM05D001369 ORTHO05D001235 7.0e-07 56.6 69 50.7
Carub.0002s0259 Capsella rubella HOM05D001369 ORTHO05D001235 2.1e-06 55.1 73 46.6
Glyma.17G009700 Glycine max HOM05D001369 ORTHO05D001235 2.1e-06 55.1 65 53.8
HanXRQChr01g0006551 Helianthus annuus HOM05D001369 ORTHO05D001235 2.1e-06 55.1 77 51.9
PSO675G9360 Papaver somniferum HOM05D001369 ORTHO05D001235 2.1e-06 55.1 69 49.3
CDE02G0147 Ceratophyllum demersum HOM05D001369 ORTHO05D001235 4.6e-06 53.9 67 49.3


User provided reference genes

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