Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007186001 Vitis vinifera HOM05D005855 ORTHO05D006406 3.3e-65 251.5 125 100.0
vmacro08871 Vaccinium macrocarpon HOM05D005855 ORTHO05D006406 3.6e-43 178.3 117 75.2
Rhsim04G0133000 Rhododendron simsii HOM05D005855 ORTHO05D006406 1.7e-40 169.5 115 76.5
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 2.2e-40 169.1 112 73.2
Sed0023015 Sechium edule HOM05D005855 ORTHO05D006406 3.1e-39 165.2 115 68.7
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 7.0e-39 164.1 114 72.8
Actinidia31264 Actinidia chinensis HOM05D005855 ORTHO05D006406 9.1e-39 163.7 111 71.2
Aa31LG2G2480 Aethionema arabicum HOM05D005855 ORTHO05D006406 9.1e-39 163.7 112 67.9
BolC6t38999H Brassica oleracea HOM05D005855 ORTHO05D006406 1.6e-38 162.9 110 70.9
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 1.6e-38 162.9 112 68.8
Actinidia19643 Actinidia chinensis HOM05D005855 ORTHO05D006406 2.7e-38 162.2 112 71.4
A07p32840 Brassica napus HOM05D005855 ORTHO05D006406 2.7e-38 162.2 110 70.0
BraA07t30911Z Brassica rapa HOM05D005855 ORTHO05D006406 2.7e-38 162.2 110 70.0
ClCG11G010010 Citrullus lanatus HOM05D005855 ORTHO05D006406 3.5e-38 161.8 115 66.1
MD00G1017400 Malus domestica HOM05D005855 ORTHO05D006406 3.5e-38 161.8 115 67.0
Sp5g20320 Schrenkiella parvula HOM05D005855 ORTHO05D006406 4.5e-38 161.4 110 70.0
CARHR057120 Cardamine hirsuta HOM05D005855 ORTHO05D006406 5.9e-38 161.0 112 68.8
C06p39070 Brassica napus HOM05D005855 ORTHO05D006406 7.7e-38 160.6 110 70.0
Prupe.6G365000 Prunus persica HOM05D005855 ORTHO05D006406 7.7e-38 160.6 118 66.9
AUR62006618 Chenopodium quinoa HOM05D005855 ORTHO05D006406 1.0e-37 160.2 115 68.7
Thhalv10018127m.g Eutrema salsugineum HOM05D005855 ORTHO05D006406 1.3e-37 159.8 110 69.1
CANSAT64G2413 Cannabis sativa HOM05D005855 ORTHO05D006406 2.3e-37 159.1 111 69.4
Carub.0002s1120 Capsella rubella HOM05D005855 ORTHO05D006406 3.8e-37 158.3 112 67.0
RcHm_v2.0_Chr3g0447421 Rosa chinensis HOM05D005855 ORTHO05D006406 3.8e-37 158.3 118 66.1
AL2G22160 Arabidopsis lyrata HOM05D005855 ORTHO05D006406 5.0e-37 157.9 112 67.0
Glyma.18G244800 Glycine max HOM05D005855 ORTHO05D006406 5.0e-37 157.9 117 66.7
TAR362G1086 Trochodendron aralioides HOM05D005855 ORTHO05D006406 5.0e-37 157.9 111 67.6
MD12G1261700 Malus domestica HOM05D005855 ORTHO05D006406 8.6e-37 157.1 118 65.3
AT1G65470 Arabidopsis thaliana HOM05D005855 ORTHO05D006406 1.1e-36 156.8 112 66.1
CsaV3_2G010280 Cucumis sativus L. HOM05D005855 ORTHO05D006406 1.5e-36 156.4 115 64.3
Medtr7g080500 Medicago truncatula HOM05D005855 ORTHO05D006406 1.5e-36 156.4 117 66.7
Ca_08015_v3 Cicer arietinum L. HOM05D005855 ORTHO05D006406 1.9e-36 156.0 117 65.8
ECA232G0592 Erigeron canadensis HOM05D005855 ORTHO05D006406 1.9e-36 156.0 120 64.2
TPR.G31229 Trifolium pratense HOM05D005855 ORTHO05D006406 1.9e-36 156.0 117 65.8
arahy.Tifrunner.gnm1.ann1.VEFL47 Arachis hypogaea HOM05D005855 ORTHO05D006406 2.5e-36 155.6 115 64.3
AUR62000270 Chenopodium quinoa HOM05D005855 ORTHO05D006406 2.5e-36 155.6 115 67.0
TWI18G0231 Tripterygium wilfordii HOM05D005855 ORTHO05D006406 3.3e-36 155.2 112 66.1
MELO3C008612.2 Cucumis melo HOM05D005855 ORTHO05D006406 4.2e-36 154.8 115 63.5
HanXRQChr16g0511741 Helianthus annuus HOM05D005855 ORTHO05D006406 7.2e-36 154.1 120 66.7
Lalb_Chr03g0038151 Lupinus albus HOM05D005855 ORTHO05D006406 7.2e-36 154.1 111 64.9
FvH4_6g00081 Fragaria vesca HOM05D005855 ORTHO05D006406 9.5e-36 153.7 119 64.7
FAN09G4305 Fragaria x ananassa HOM05D005855 ORTHO05D006406 9.5e-36 153.7 119 64.7
FAN14G2818 Fragaria x ananassa HOM05D005855 ORTHO05D006406 9.5e-36 153.7 119 64.7
Oeu001220.3 Olea europaea HOM05D005855 ORTHO05D006406 9.5e-36 153.7 121 62.0
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 1.2e-35 153.3 113 64.6
FAN02G1917 Fragaria x ananassa HOM05D005855 ORTHO05D006406 1.6e-35 152.9 119 64.7
Atru.chr2.218 Acer truncatum HOM05D005855 ORTHO05D006406 2.1e-35 152.5 113 65.5
Phvul.008G051800 Phaseolus vulgaris HOM05D005855 ORTHO05D006406 2.1e-35 152.5 117 66.7
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 2.8e-35 152.1 110 65.5
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 2.8e-35 152.1 112 67.0
Glyma.09G248000 Glycine max HOM05D005855 ORTHO05D006406 8.0e-35 150.6 117 65.8
Lj1g0024601 Lotus japonicus HOM05D005855 ORTHO05D006406 8.0e-35 150.6 117 65.0
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 1.4e-34 149.8 111 64.9
PGR031G3878 Punica granatum HOM05D005855 ORTHO05D006406 1.4e-34 149.8 112 63.4
THA.LOC104805689 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 1.4e-34 149.8 112 66.1
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 1.8e-34 149.4 114 64.0
Psat3g103080 Pisum sativum HOM05D005855 ORTHO05D006406 2.3e-34 149.1 117 65.0
Ah.04g159310 Amaranthus hybridus HOM05D005855 ORTHO05D006406 3.0e-34 148.7 109 63.3
EL10Ac4g10026 Beta vulgaris HOM05D005855 ORTHO05D006406 3.0e-34 148.7 109 64.2
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 4.0e-34 148.3 113 63.7
Oeu034710.1 Olea europaea HOM05D005855 ORTHO05D006406 4.0e-34 148.3 110 64.5
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 5.2e-34 147.9 110 66.4
Hund21931 Selenicereus undatus HOM05D005855 ORTHO05D006406 5.2e-34 147.9 110 65.5
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 6.8e-34 147.5 110 68.2
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 6.8e-34 147.5 111 65.8
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 8.9e-34 147.1 111 63.1
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 8.9e-34 147.1 112 61.6
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 8.9e-34 147.1 112 61.6
MSTRG.8191 Avicennia marina HOM05D005855 ORTHO05D006406 1.5e-33 146.4 110 63.6
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 1.5e-33 146.4 111 62.2
Sc16g0010640 Simmondsia chinensis HOM05D005855 ORTHO05D006406 2.0e-33 146.0 110 64.5
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 4.4e-33 144.8 111 63.1
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 4.4e-33 144.8 109 64.2
MBI07_g11487_MAGBIO Magnolia biondii HOM05D005855 ORTHO05D006406 5.7e-33 144.4 112 62.5
SGA_v2.0_scaffold122G33208 Striga asiatica HOM05D005855 ORTHO05D006406 7.5e-33 144.1 111 64.9
Aqoxy2G04154 Aquilegia oxysepala HOM05D005855 ORTHO05D006406 9.8e-33 143.7 111 61.3
Migut.F01842 Erythranthe guttata HOM05D005855 ORTHO05D006406 1.3e-32 143.3 111 63.1
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 1.3e-32 143.3 112 63.4
CAN.G321.5 Capsicum annuum HOM05D005855 ORTHO05D006406 1.7e-32 142.9 109 64.2
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.7e-32 142.9 110 63.6
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 2.2e-32 142.5 110 63.6
TWI36G1346 Tripterygium wilfordii HOM05D000941 ORTHO05D006406 3.7e-32 141.7 112 65.2
VMungo1383G1707 Vigna mungo HOM05D005855 ORTHO05D006406 3.7e-32 141.7 116 60.3
PSO573G0046 Papaver somniferum HOM05D005855 ORTHO05D006406 6.3e-32 141.0 110 60.9
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 6.3e-32 141.0 109 60.6
SGA_v2.0_scaffold340G49313 Striga asiatica HOM05D005855 ORTHO05D006406 8.3e-32 140.6 111 62.2
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 1.1e-31 140.2 110 62.7
PSO017G4019 Papaver somniferum HOM05D005855 ORTHO05D006406 1.1e-31 140.2 112 60.7
CDE04G3007 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 3.1e-31 138.7 111 59.5
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 3.1e-31 138.7 157 50.3
Gohir.D03G072500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 3.1e-31 138.7 110 61.8
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 7.0e-31 137.5 108 59.3
Gohir.A02G107108 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.6e-30 136.3 110 60.9
Gorai.003G087300 Gossypium raimondii HOM05D005855 ORTHO05D006406 2.0e-30 136.0 110 60.9
Cpa.g.c37190 Carica papaya HOM05D005855 ORTHO05D006406 2.7e-30 135.6 110 57.3
Lalb_Chr21g0311491 Lupinus albus HOM05D005855 ORTHO05D006406 2.7e-30 135.6 118 58.5
CDE02G2532 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 4.5e-30 134.8 111 59.5
VMungo1383G0582 Vigna mungo HOM05D005855 ORTHO05D000818 1.0e-29 133.7 120 56.7
HPP92_024393 Vanilla planifolia HOM05D005855 ORTHO05D006406 2.3e-29 132.5 110 58.2
SEGI_12971 Sequoiadendron giganteum HOM05D005855 ORTHO05D006406 6.6e-29 131.0 110 58.2
unitig_749.g13497 Utricularia gibba HOM05D005855 ORTHO05D006406 6.6e-29 131.0 110 56.4
Cc09_g04110 Coffea canephora HOM05D005855 ORTHO05D006406 1.1e-28 130.2 116 56.0
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 1.5e-28 129.8 107 61.7
Zm00001eb365740 Zea mays HOM05D005855 ORTHO05D006406 5.6e-28 127.9 109 58.7
Os01g0896300 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 2.1e-27 125.9 109 56.9
ATR0743G043 Amborella trichopoda HOM05D005855 ORTHO05D006406 1.4e-26 123.2 112 51.8
Zm00001eb144810 Zea mays HOM05D005855 ORTHO05D006406 5.2e-26 121.3 109 54.1
AagrBONN_evm.TU.Sc2ySwM_344.4907 Anthoceros agrestis HOM05D005855 ORTHO05D006406 4.1e-23 111.7 111 49.5
Dinv29076 Davidia involucrata HOM05D005855 ORTHO05D006406 1.6e-22 109.8 77 68.8
Zm00001eb304780 Zea mays HOM05D005855 ORTHO05D006406 8.6e-21 104.0 114 43.9
Eucgr.B01457 Eucalyptus grandis HOM05D005855 ORTHO05D006406 4.3e-20 101.7 56 76.8
TPR.G32502 Trifolium pratense HOM05D005855 ORTHO05D006406 7.3e-20 100.9 84 60.7
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 1.4e-18 96.7 111 51.4
Actinidia07922 Actinidia chinensis HOM05D005855 ORTHO05D006406 3.1e-18 95.5 53 79.2
Cpa.g.sc88.1 Carica papaya HOM05D005855 ORTHO05D006406 5.8e-17 91.3 104 43.3
Mapoly0189s0010 Marchantia polymorpha HOM05D005855 ORTHO05D006406 2.3e-10 69.3 105 35.2


User provided reference genes

Program Settings