Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007185001 Vitis vinifera HOM05D005855 ORTHO05D006406 4.5e-141 504.6 256 100.0
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 6.1e-98 361.3 248 75.0
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 1.2e-85 320.5 241 69.3
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 1.2e-85 320.5 241 69.3
Rhsim04G0133000 Rhododendron simsii HOM05D005855 ORTHO05D006406 1.9e-83 313.2 252 65.5
QL01p051710 Quercus lobata HOM05D005855 ORTHO05D006406 2.5e-83 312.8 250 66.8
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 3.3e-83 312.4 242 69.0
Actinidia07922 Actinidia chinensis HOM05D005855 ORTHO05D006406 7.5e-80 301.2 250 63.6
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 2.2e-79 299.7 250 64.0
vmacro08871 Vaccinium macrocarpon HOM05D005855 ORTHO05D006406 3.7e-79 298.9 250 64.0
Gohir.A02G107108 Gossypium hirsutum HOM05D005855 ORTHO05D006406 6.4e-79 298.1 255 64.3
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 1.9e-78 296.6 241 66.0
Actinidia19643 Actinidia chinensis HOM05D005855 ORTHO05D006406 2.4e-78 296.2 259 62.2
Gorai.003G087300 Gossypium raimondii HOM05D005855 ORTHO05D006406 4.1e-78 295.4 255 63.5
Gohir.D03G072500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.2e-77 293.9 255 63.5
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 3.0e-76 289.3 239 63.6
Prupe.6G365000 Prunus persica HOM05D005855 ORTHO05D006406 5.0e-76 288.5 250 62.4
RcHm_v2.0_Chr3g0447421 Rosa chinensis HOM05D005855 ORTHO05D006406 8.6e-76 287.7 250 61.6
MELO3C008612.2 Cucumis melo HOM05D005855 ORTHO05D006406 1.1e-75 287.3 250 62.0
FvH4_6g00081 Fragaria vesca HOM05D005855 ORTHO05D006406 1.5e-75 287.0 254 59.8
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.5e-75 287.0 253 62.1
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 3.3e-75 285.8 257 58.4
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 4.3e-75 285.4 251 64.5
Oeu034710.1 Olea europaea HOM05D005855 ORTHO05D006406 1.2e-74 283.9 249 59.8
Atru.chr2.218 Acer truncatum HOM05D005855 ORTHO05D006406 1.6e-74 283.5 255 61.6
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 3.6e-74 282.3 253 61.7
FAN14G2818 Fragaria x ananassa HOM05D005855 ORTHO05D006406 4.7e-74 282.0 254 59.1
FAN02G1917 Fragaria x ananassa HOM05D005855 ORTHO05D006406 8.0e-74 281.2 254 59.4
MD12G1261700 Malus domestica HOM05D005855 ORTHO05D006406 8.0e-74 281.2 250 60.0
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 1.8e-73 280.0 249 59.4
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 2.3e-73 279.6 260 56.9
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 4.0e-73 278.9 252 58.7
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 6.8e-73 278.1 252 58.3
FAN09G4305 Fragaria x ananassa HOM05D005855 ORTHO05D006406 1.5e-72 276.9 265 57.0
CsaV3_2G010280 Cucumis sativus L. HOM05D005855 ORTHO05D006406 3.4e-72 275.8 250 59.2
CANSAT64G2413 Cannabis sativa HOM05D005855 ORTHO05D006406 9.8e-72 274.2 238 61.8
Lj1g0024601 Lotus japonicus HOM05D005855 ORTHO05D006406 9.8e-72 274.2 235 63.4
TAR362G1086 Trochodendron aralioides HOM05D005855 ORTHO05D006406 9.8e-72 274.2 241 62.2
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 1.3e-71 273.9 256 55.5
Cc09_g04110 Coffea canephora HOM05D005855 ORTHO05D006406 2.2e-71 273.1 248 58.5
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 2.9e-71 272.7 252 57.5
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 4.9e-71 271.9 252 57.5
CAN.G321.5 Capsicum annuum HOM05D005855 ORTHO05D006406 1.1e-70 270.8 251 59.4
AUR62006618 Chenopodium quinoa HOM05D005855 ORTHO05D006406 1.1e-70 270.8 252 56.3
Dinv29076 Davidia involucrata HOM05D005855 ORTHO05D006406 3.2e-70 269.2 251 58.2
Glyma.18G244800 Glycine max HOM05D005855 ORTHO05D006406 5.4e-70 268.5 234 61.1
AUR62000270 Chenopodium quinoa HOM05D005855 ORTHO05D006406 1.6e-69 266.9 252 56.7
ClCG11G010010 Citrullus lanatus HOM05D005855 ORTHO05D006406 2.1e-69 266.5 250 59.2
MBI07_g11487_MAGBIO Magnolia biondii HOM05D005855 ORTHO05D006406 4.6e-69 265.4 245 58.4
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 6.0e-69 265.0 280 52.5
EL10Ac4g10026 Beta vulgaris HOM05D005855 ORTHO05D006406 1.3e-68 263.8 251 53.8
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 2.3e-68 263.1 250 60.4
Migut.F01842 Erythranthe guttata HOM05D005855 ORTHO05D006406 3.9e-68 262.3 253 56.1
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 1.9e-67 260.0 253 56.1
Ca_08015_v3 Cicer arietinum L. HOM05D005855 ORTHO05D006406 3.3e-67 259.2 246 57.3
Glyma.09G248000 Glycine max HOM05D005855 ORTHO05D006406 5.6e-67 258.5 234 59.4
Ah.04g159310 Amaranthus hybridus HOM05D005855 ORTHO05D006406 7.3e-67 258.1 250 56.0
AL2G22160 Arabidopsis lyrata HOM05D005855 ORTHO05D006406 1.2e-66 257.3 227 59.9
Carub.0002s1120 Capsella rubella HOM05D005855 ORTHO05D006406 1.2e-66 257.3 237 57.8
TWI18G0231 Tripterygium wilfordii HOM05D005855 ORTHO05D006406 1.2e-66 257.3 250 54.8
HanXRQChr16g0511741 Helianthus annuus HOM05D005855 ORTHO05D006406 1.6e-66 256.9 256 57.4
Aqoxy2G04154 Aquilegia oxysepala HOM05D005855 ORTHO05D006406 2.1e-66 256.5 243 58.4
TPR.G31229 Trifolium pratense HOM05D005855 ORTHO05D006406 2.8e-66 256.1 240 57.9
Lalb_Chr03g0038151 Lupinus albus HOM05D005855 ORTHO05D006406 3.6e-66 255.8 240 57.5
Medtr7g080500 Medicago truncatula HOM05D005855 ORTHO05D006406 1.1e-65 254.2 250 54.8
Psat3g103080 Pisum sativum HOM05D005855 ORTHO05D006406 4.0e-65 252.3 249 55.0
AT1G65470 Arabidopsis thaliana HOM05D005855 ORTHO05D006406 5.2e-65 251.9 227 58.6
C06p39070 Brassica napus HOM05D005855 ORTHO05D006406 5.2e-65 251.9 237 59.1
BolC6t38999H Brassica oleracea HOM05D005855 ORTHO05D006406 5.2e-65 251.9 237 59.1
ECA232G0592 Erigeron canadensis HOM05D005855 ORTHO05D006406 6.8e-65 251.5 251 55.4
Hund21931 Selenicereus undatus HOM05D005855 ORTHO05D006406 6.8e-65 251.5 250 56.0
A07p32840 Brassica napus HOM05D005855 ORTHO05D006406 8.9e-65 251.1 237 58.6
BraA07t30911Z Brassica rapa HOM05D005855 ORTHO05D006406 8.9e-65 251.1 237 58.6
Thhalv10018127m.g Eutrema salsugineum HOM05D005855 ORTHO05D006406 8.9e-65 251.1 231 58.9
TWI36G1346 Tripterygium wilfordii HOM05D000941 ORTHO05D006406 1.2e-64 250.8 219 59.4
CARHR057120 Cardamine hirsuta HOM05D005855 ORTHO05D006406 1.5e-64 250.4 226 59.7
PGR031G3878 Punica granatum HOM05D005855 ORTHO05D006406 2.6e-64 249.6 225 62.7
MSTRG.8191 Avicennia marina HOM05D005855 ORTHO05D006406 5.8e-64 248.4 253 55.3
Sed0023015 Sechium edule HOM05D005855 ORTHO05D006406 9.9e-64 247.7 250 55.2
arahy.Tifrunner.gnm1.ann1.65FHJK Arachis hypogaea HOM05D005855 ORTHO05D006406 1.3e-63 247.3 238 57.6
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 8.3e-63 244.6 249 53.0
SGA_v2.0_scaffold122G33208 Striga asiatica HOM05D005855 ORTHO05D006406 1.4e-62 243.8 253 54.9
Eucgr.B01457 Eucalyptus grandis HOM05D005855 ORTHO05D006406 3.2e-62 242.7 223 61.0
THA.LOC104805689 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 7.1e-62 241.5 240 55.4
Aa31LG2G2480 Aethionema arabicum HOM05D005855 ORTHO05D006406 3.0e-60 236.1 237 56.1
MD00G1017400 Malus domestica HOM05D005855 ORTHO05D006406 6.6e-60 235.0 258 51.6
Sp5g20320 Schrenkiella parvula HOM05D005855 ORTHO05D006406 8.6e-60 234.6 227 59.0
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.5e-59 233.8 255 53.7
Phvul.008G051800 Phaseolus vulgaris HOM05D005855 ORTHO05D006406 5.6e-59 231.9 236 55.9
arahy.Tifrunner.gnm1.ann1.VEFL47 Arachis hypogaea HOM05D005855 ORTHO05D006406 1.1e-57 227.6 238 54.6
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 1.1e-57 227.6 187 60.4
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 1.8e-57 226.9 257 52.9
SGA_v2.0_scaffold340G49313 Striga asiatica HOM05D005855 ORTHO05D006406 8.9e-57 224.6 244 49.6
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 7.6e-56 221.5 226 54.0
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 1.3e-55 220.7 192 61.5
Os01g0896300 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 4.2e-54 215.7 225 55.6
Sc16g0010640 Simmondsia chinensis HOM05D005855 ORTHO05D006406 1.6e-53 213.8 187 58.8
Zm00001eb144810 Zea mays HOM05D005855 ORTHO05D006406 1.0e-52 211.1 226 50.9
Zm00001eb365740 Zea mays HOM05D005855 ORTHO05D006406 1.9e-51 206.8 234 51.3
Lalb_Chr21g0311491 Lupinus albus HOM05D005855 ORTHO05D006406 2.5e-51 206.5 217 54.4
VMungo1383G1707 Vigna mungo HOM05D005855 ORTHO05D006406 3.3e-51 206.1 240 51.2
PSO017G4019 Papaver somniferum HOM05D005855 ORTHO05D006406 1.4e-46 190.7 363 37.5
HPP92_024393 Vanilla planifolia HOM05D005855 ORTHO05D006406 2.4e-46 189.9 238 49.6
PSO573G0046 Papaver somniferum HOM05D005855 ORTHO05D006406 7.1e-46 188.3 367 37.1
unitig_749.g13497 Utricularia gibba HOM05D005855 ORTHO05D006406 1.1e-43 181.0 220 50.5
ATR0743G043 Amborella trichopoda HOM05D005855 ORTHO05D006406 4.3e-43 179.1 276 40.2
Zm00001eb304780 Zea mays HOM05D005855 ORTHO05D006406 2.6e-40 169.9 209 44.5
CDE04G3007 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 1.5e-35 154.1 202 46.5
arahy.Tifrunner.gnm1.ann1.8C47BX Arachis hypogaea HOM05D005855 ORTHO05D006406 4.0e-33 146.0 230 41.7
Os07g0273301 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 5.3e-33 145.6 159 48.4
arahy.Tifrunner.gnm1.ann1.F2WWIZ Arachis hypogaea HOM05D005855 ORTHO05D006406 9.0e-33 144.8 230 42.2
Oeu001220.3 Olea europaea HOM05D005855 ORTHO05D006406 2.6e-32 143.3 141 53.9
Zm00001eb310680 Zea mays HOM05D000012 ORTHO05D006406 1.3e-31 141.0 202 42.6
Actinidia31264 Actinidia chinensis HOM05D005855 ORTHO05D006406 9.3e-30 134.8 111 66.7
SEGI_12971 Sequoiadendron giganteum HOM05D005855 ORTHO05D006406 1.0e-28 131.3 288 36.1
Zm00001eb381860 Zea mays HOM05D000012 ORTHO05D006406 3.7e-18 96.3 194 34.0
Zm00001eb367440 Zea mays HOM05D005855 ORTHO05D006406 4.2e-14 82.8 105 47.6
SMO356G0323 Selaginella moellendorffii HOM05D005855 ORTHO05D006406 8.8e-12 75.1 158 35.4
AagrBONN_evm.TU.Sc2ySwM_344.4907 Anthoceros agrestis HOM05D005855 ORTHO05D006406 9.7e-11 71.6 215 26.5
Ah.06g195240 Amaranthus hybridus HOM05D000941 ORTHO05D000882 4.1e-09 66.2 84 46.4
RcHm_v2.0_Chr5g0011851 Rosa chinensis HOM05D005855 ORTHO05D006406 2.6e-08 63.5 47 59.6


User provided reference genes

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