Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01004399001 Vitis vinifera HOM05D004917 ORTHO05D005954 6.5e-90 334.0 160 100.0
GSVIVG01007168001 Vitis vinifera HOM05D004917 ORTHO05D005954 6.5e-90 334.0 160 100.0
TAR628G1580 Trochodendron aralioides HOM05D004917 ORTHO05D005954 1.2e-83 313.2 160 91.2
Hma1.2p1_0424F.1_g150480 Hydrangea macrophylla HOM05D004917 ORTHO05D005954 2.7e-83 312.0 160 90.0
Cfa004388 Carpinus fangiana HOM05D004917 ORTHO05D005954 1.7e-82 309.3 160 88.8
Atru.chr3.1060 Acer truncatum HOM05D004917 ORTHO05D005954 3.8e-82 308.1 160 88.8
Rhsim08G0090300 Rhododendron simsii HOM05D004917 ORTHO05D005954 8.6e-82 307.0 160 89.4
Lj4g0024725 Lotus japonicus HOM05D004917 ORTHO05D005954 1.5e-81 306.2 160 88.8
Eucgr.H02332 Eucalyptus grandis HOM05D004917 ORTHO05D005954 1.9e-81 305.8 160 86.9
Psat4g080360 Pisum sativum HOM05D004917 ORTHO05D005954 1.9e-81 305.8 160 88.8
Prupe.6G216800 Prunus persica HOM05D004917 ORTHO05D005954 1.9e-81 305.8 160 89.4
Potri.014G012100 Populus trichocarpa HOM05D004917 ORTHO05D005954 2.5e-81 305.4 160 86.2
QL06p038930 Quercus lobata HOM05D004917 ORTHO05D005954 2.5e-81 305.4 159 85.5
FvH4_1g18250 Fragaria vesca HOM05D004917 ORTHO05D005954 4.2e-81 304.7 160 89.4
RcHm_v2.0_Chr2g0108761 Rosa chinensis HOM05D004917 ORTHO05D005954 4.2e-81 304.7 160 89.4
Sabra14G0006700 Salix brachista HOM05D004917 ORTHO05D005954 5.5e-81 304.3 160 85.6
Glyma.17G158500 Glycine max HOM05D004917 ORTHO05D005954 7.2e-81 303.9 160 88.1
VMungo0251G1412 Vigna mungo HOM05D004917 ORTHO05D005954 2.1e-80 302.4 160 87.5
Ciclev10026314m.g Citrus clementina HOM05D004917 ORTHO05D005954 4.7e-80 301.2 160 87.5
FAN23G1748 Fragaria x ananassa HOM05D004917 ORTHO05D005954 6.1e-80 300.8 160 88.1
RcHm_v2.0_Chr2g0108751 Rosa chinensis HOM05D004917 ORTHO05D005954 6.1e-80 300.8 160 88.8
Ca_22095_v3 Cicer arietinum L. HOM05D004917 ORTHO05D005954 8.0e-80 300.4 160 86.9
Cc07_g07360 Coffea canephora HOM05D004917 ORTHO05D005954 1.0e-79 300.1 160 85.6
Eucgr.H02333 Eucalyptus grandis HOM05D004917 ORTHO05D005954 1.4e-79 299.7 160 86.2
FvH4_1g18230 Fragaria vesca HOM05D004917 ORTHO05D005954 1.4e-79 299.7 160 88.1
FAN19G0182 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.4e-79 299.7 160 88.1
Medtr4g097500 Medicago truncatula HOM05D004917 ORTHO05D005954 2.3e-79 298.9 160 86.2
Sc07g0000430 Simmondsia chinensis HOM05D004917 ORTHO05D005954 2.3e-79 298.9 160 86.2
Actinidia16409 Actinidia chinensis HOM05D004917 ORTHO05D005954 3.0e-79 298.5 160 86.2
Thecc.01G076300 Theobroma cacao HOM05D004917 ORTHO05D005954 3.0e-79 298.5 160 86.2
PGSC0003DMG400003322 Solanum tuberosum HOM05D004917 ORTHO05D005954 4.0e-79 298.1 160 85.0
Lalb_Chr11g0075991 Lupinus albus HOM05D004917 ORTHO05D005954 5.2e-79 297.7 160 85.6
Sopen02g014680 Solanum pennellii HOM05D004917 ORTHO05D005954 5.2e-79 297.7 160 85.0
Cpa.g.sc673.2 Carica papaya HOM05D004917 ORTHO05D005954 6.8e-79 297.4 160 86.9
FAN26G0787 Fragaria x ananassa HOM05D004917 ORTHO05D005954 8.9e-79 297.0 160 87.5
TWI74G1062 Tripterygium wilfordii HOM05D004917 ORTHO05D005954 2.6e-78 295.4 160 83.8
MD02G1189600 Malus domestica HOM05D004917 ORTHO05D005954 3.4e-78 295.0 160 84.4
Nn5g30667 Nelumbo nucifera HOM05D004917 ORTHO05D005954 3.4e-78 295.0 158 88.0
Manes.13G109000 Manihot esculenta HOM05D004917 ORTHO05D005954 4.4e-78 294.7 155 87.7
PSO017G2968 Papaver somniferum HOM05D004917 ORTHO05D005954 4.4e-78 294.7 160 87.5
PSO170G3850 Papaver somniferum HOM05D004917 ORTHO05D005954 5.7e-78 294.3 160 86.9
Phvul.003G232900 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 5.7e-78 294.3 160 85.0
vmacro18012 Vaccinium macrocarpon HOM05D004917 ORTHO05D005954 5.7e-78 294.3 160 85.0
Oeu013341.1 Olea europaea HOM05D004917 ORTHO05D005954 7.5e-78 293.9 155 87.1
Nitab4.5_0000036g0150 Nicotiana tabacum HOM05D004917 ORTHO05D005954 1.3e-77 293.1 160 83.8
CAN.G775.1 Capsicum annuum HOM05D004917 ORTHO05D005954 1.7e-77 292.7 160 83.8
Duzib147G0189 Durio zibethinus HOM05D004917 ORTHO05D005954 1.7e-77 292.7 160 85.0
CANSAT01G2436 Cannabis sativa HOM05D004917 ORTHO05D005954 2.2e-77 292.4 160 85.0
COL.COLO4_11615 Corchorus olitorius HOM05D004917 ORTHO05D005954 2.2e-77 292.4 162 83.3
Os03g0729200 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 4.9e-77 291.2 160 82.5
DCAR_000455 Daucus carota HOM05D004917 ORTHO05D005954 8.3e-77 290.4 160 81.2
DCAR_014953 Daucus carota HOM05D004917 ORTHO05D005954 8.3e-77 290.4 160 81.2
CiPaw.01G001900 Carya illinoinensis HOM05D004917 ORTHO05D005954 1.1e-76 290.0 158 84.8
Gorai.008G085700 Gossypium raimondii HOM05D004917 ORTHO05D005954 1.1e-76 290.0 157 82.8
Gohir.A10G089200 Gossypium hirsutum HOM05D004917 ORTHO05D005954 1.4e-76 289.7 160 83.8
Gorai.011G108500 Gossypium raimondii HOM05D004917 ORTHO05D005954 1.4e-76 289.7 160 83.8
Aqoxy1G00260 Aquilegia oxysepala HOM05D004917 ORTHO05D005954 1.8e-76 289.3 160 83.1
arahy.Tifrunner.gnm1.ann1.1K25L2 Arachis hypogaea HOM05D004917 ORTHO05D005954 1.8e-76 289.3 162 83.3
Glyma.17G158400 Glycine max HOM05D004917 ORTHO05D005954 1.8e-76 289.3 160 84.4
Gohir.D12G076900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 3.1e-76 288.5 157 82.2
Thecc.01G076400 Theobroma cacao HOM05D004917 ORTHO05D005954 3.1e-76 288.5 160 83.8
GSVIVG01007444001 Vitis vinifera HOM05D004917 ORTHO05D005954 3.1e-76 288.5 160 84.4
COL.COLO4_11616 Corchorus olitorius HOM05D004917 ORTHO05D005954 4.1e-76 288.1 160 83.1
Gohir.D10G098900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 4.1e-76 288.1 160 83.1
FAN19G2004 Fragaria x ananassa HOM05D004917 ORTHO05D005954 9.2e-76 287.0 151 89.4
Zm00001eb215580 Zea mays HOM05D004917 ORTHO05D005954 2.7e-75 285.4 160 81.2
Phvul.003G232800 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 3.5e-75 285.0 160 82.5
Sed0017274 Sechium edule HOM05D004917 ORTHO05D005954 3.5e-75 285.0 156 84.0
arahy.Tifrunner.gnm1.ann1.UB5R5Q Arachis hypogaea HOM05D004917 ORTHO05D005954 5.9e-75 284.3 162 82.7
Lsat_1_v5_gn_4_160020 Lactuca sativa HOM05D004917 ORTHO05D005954 2.9e-74 282.0 162 81.5
SalBow5G1886 Salvia bowleyana HOM05D004917 ORTHO05D005954 3.8e-74 281.6 157 81.5
CsaV3_2G016370 Cucumis sativus L. HOM05D004917 ORTHO05D005954 5.0e-74 281.2 163 80.4
PGR102G2131 Punica granatum HOM05D004917 ORTHO05D005954 3.3e-73 278.5 160 79.4
ECA232G4556 Erigeron canadensis HOM05D004917 ORTHO05D005954 4.3e-73 278.1 160 79.4
Migut.L00432 Erythranthe guttata HOM05D004917 ORTHO05D005954 5.6e-73 277.7 159 80.5
SEGI_14750 Sequoiadendron giganteum HOM05D004917 ORTHO05D005954 1.2e-72 276.6 160 78.8
VMungo0251G2665 Vigna mungo HOM05D004917 ORTHO05D005954 1.2e-72 276.6 160 81.2
FvH4_1g18251 Fragaria vesca HOM05D004917 ORTHO05D005954 2.1e-72 275.8 161 80.1
EL10Ac6g15593 Beta vulgaris HOM05D004917 ORTHO05D005954 8.0e-72 273.9 160 78.8
Sp2g28930 Schrenkiella parvula HOM05D004917 ORTHO05D005954 8.0e-72 273.9 160 78.1
Thhalv10004770m.g Eutrema salsugineum HOM05D004917 ORTHO05D005954 1.0e-71 273.5 160 77.5
HanXRQChr09g0262071 Helianthus annuus HOM05D004917 ORTHO05D005954 1.0e-71 273.5 156 80.8
THA.LOC104827747 Tarenaya hassleriana HOM05D004917 ORTHO05D005954 1.8e-71 272.7 160 78.1
PSO170G3322 Papaver somniferum HOM05D004917 ORTHO05D005954 8.9e-71 270.4 154 80.5
Carub.0008s2673 Capsella rubella HOM05D004917 ORTHO05D005954 1.2e-70 270.0 160 76.9
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.5e-70 269.6 160 78.1
AL8G43550 Arabidopsis lyrata HOM05D004917 ORTHO05D005954 1.5e-70 269.6 160 76.9
PSO017G2694 Papaver somniferum HOM05D004917 ORTHO05D005954 2.6e-70 268.9 153 81.0
AT5G65840 Arabidopsis thaliana HOM05D004917 ORTHO05D005954 4.4e-70 268.1 160 76.2
AUR62007540 Chenopodium quinoa HOM05D004917 ORTHO05D005954 1.3e-69 266.5 160 77.5
Peaxi162Scf00449g00417 Petunia axillaris HOM05D004917 ORTHO05D005954 1.7e-69 266.2 158 79.7
A09p09210 Brassica napus HOM05D004917 ORTHO05D005954 4.9e-69 264.6 155 75.5
AUR62004032 Chenopodium quinoa HOM05D004917 ORTHO05D005954 6.4e-69 264.2 160 76.9
BcaB04g20033 Brassica carinata HOM05D004917 ORTHO05D005954 8.3e-69 263.8 155 74.8
BcaB04g20036 Brassica carinata HOM05D004917 ORTHO05D005954 8.3e-69 263.8 155 74.8
C09p10750 Brassica napus HOM05D004917 ORTHO05D005954 8.3e-69 263.8 155 75.5
BraA09t36573Z Brassica rapa HOM05D004917 ORTHO05D005954 8.3e-69 263.8 155 75.5
BcaC04g23243 Brassica carinata HOM05D004917 ORTHO05D005954 1.1e-68 263.5 155 74.8
CARHR279840 Cardamine hirsuta HOM05D004917 ORTHO05D005954 1.4e-68 263.1 160 75.6
BolC9t53970H Brassica oleracea HOM05D004917 ORTHO05D005954 1.9e-68 262.7 155 74.8
Ah.03g140710 Amaranthus hybridus HOM05D004917 ORTHO05D005954 4.1e-68 261.5 159 76.1
ATR0739G130 Amborella trichopoda HOM05D004917 ORTHO05D005954 5.4e-68 261.2 160 76.9
ClCG02G012210 Citrullus lanatus HOM05D004917 ORTHO05D005954 9.2e-68 260.4 144 81.2
FAN28G2407 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.2e-67 260.0 152 80.3
MELO3C020846.2 Cucumis melo HOM05D004917 ORTHO05D005954 2.7e-67 258.8 147 79.6
PSO170G4503 Papaver somniferum HOM05D004917 ORTHO05D005954 2.7e-67 258.8 160 78.8
PSO017G4293 Papaver somniferum HOM05D004917 ORTHO05D005954 3.5e-67 258.5 160 77.5
SGA_v2.0_scaffold79G25603 Striga asiatica HOM05D004917 ORTHO05D005954 4.6e-67 258.1 147 82.3
CDE02G4371 Ceratophyllum demersum HOM05D004917 ORTHO05D005954 1.1e-65 253.4 158 73.4
Haze_15025 Corylus avellana HOM05D004917 ORTHO05D005954 5.6e-65 251.1 160 74.4
Lj4A165T49 Lonicera japonica HOM05D004917 ORTHO05D005954 5.6e-65 251.1 160 75.6
FAN26G1896 Fragaria x ananassa HOM05D004917 ORTHO05D005954 7.3e-65 250.8 160 77.5
RcHm_v2.0_Chr2g0108771 Rosa chinensis HOM05D004917 ORTHO05D005954 1.1e-63 246.9 165 73.9
CSS0005558 Camellia sinensis var. sinensis HOM05D004917 ORTHO05D005954 2.6e-62 242.3 160 73.8
Migut.L00430 Erythranthe guttata HOM05D004917 ORTHO05D005954 7.5e-62 240.7 152 75.0
Dinv26959 Davidia involucrata HOM05D004917 ORTHO05D005954 4.1e-60 235.0 120 93.3
Hund16417 Selenicereus undatus HOM05D004917 ORTHO05D005954 2.7e-59 232.3 148 75.0
Os03g0729300 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 2.3e-58 229.2 154 67.5
Nitab4.5_0007379g0030 Nicotiana tabacum HOM05D004917 ORTHO05D005954 5.1e-58 228.0 143 75.5
Pp3c27_7100 Physcomitrium patens HOM05D004917 ORTHO05D005954 1.9e-52 209.5 159 56.0
Zm00001eb056030 Zea mays HOM05D004917 ORTHO05D005954 1.9e-49 199.5 129 68.2
MBI16_g06077_MAGBIO Magnolia biondii HOM05D004917 ORTHO05D005954 2.5e-49 199.1 161 65.2
QL06p038908 Quercus lobata HOM05D004917 ORTHO05D005954 1.6e-48 196.4 102 88.2
FAN23G2689 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.0e-46 189.5 151 65.6
GSVIVG01004400001 Vitis vinifera HOM05D004917 ORTHO05D005954 2.6e-46 189.1 103 82.5
AagrBONN_evm.TU.Sc2ySwM_368.1530 Anthoceros agrestis HOM05D004917 ORTHO05D005954 3.0e-42 175.6 152 52.0
ATR0739G160 Amborella trichopoda HOM05D004917 ORTHO05D005954 8.1e-40 167.5 108 68.5
unitig_37.g11996 Utricularia gibba HOM05D004917 ORTHO05D005954 2.4e-39 166.0 103 72.8
FAN28G0406 Fragaria x ananassa HOM05D004917 ORTHO05D005954 8.1e-32 141.0 101 69.3
FAN26G2723 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.1e-25 120.6 145 46.9
MCO14G127 Micromonas commoda HOM05D004917 ORTHO05D005954 3.7e-24 115.5 159 40.9
Sabra07G0005500 Salix brachista HOM05D004917 ORTHO05D005954 9.0e-23 110.9 156 44.9
Potri.007G007201 Populus trichocarpa HOM05D004917 ORTHO05D005954 1.1e-20 104.0 69 73.9
GSVIVG01007167001 Vitis vinifera HOM05D004917 ORTHO05D005954 2.7e-19 99.4 60 81.7
QL02p069743 Quercus lobata HOM05D004917 ORTHO05D005954 1.0e-18 97.4 62 72.6
QL06p038910 Quercus lobata HOM05D004917 ORTHO05D005954 1.3e-18 97.1 53 81.1
arahy.Tifrunner.gnm1.ann1.F27BB1 Arachis hypogaea HOM05D004917 ORTHO05D005954 6.7e-18 94.7 85 58.8
Carub.0004s1915 Capsella rubella HOM05D007024 ORTHO05D008865 4.3e-17 92.0 157 35.7
Zm00001eb030360 Zea mays HOM05D004917 ORTHO05D005954 5.6e-17 91.7 54 83.3
SMO353G0397 Selaginella moellendorffii HOM05D007024 ORTHO05D008865 1.6e-16 90.1 156 36.5
PRCOL_00004664 Prasinoderma coloniale HOM05D004917 ORTHO05D005954 3.7e-16 89.0 132 38.6
MCO06G061 Micromonas commoda HOM05D004917 ORTHO05D005954 1.9e-12 76.6 131 33.6
TAR633G0628 Trochodendron aralioides HOM05D007024 ORTHO05D008865 7.9e-11 71.2 125 32.8
AagrBONN_evm.TU.Sc2ySwM_344.3825 Anthoceros agrestis HOM05D007024 ORTHO05D008865 1.8e-10 70.1 91 38.5
Haze_02356 Corylus avellana HOM05D004917 ORTHO05D005954 1.1e-09 67.4 37 81.1
MCO07G374 Micromonas commoda HOM05D004917 ORTHO05D005954 3.7e-08 62.4 79 41.8
Cre17.g697050 Chlamydomonas reinhardtii HOM05D004917 ORTHO05D005954 3.4e-06 55.8 187 24.6
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 7.7e-06 54.7 79 34.2


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