Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 1.5e-135 486.1 238 100.0
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 3.4e-135 485.0 238 99.6
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 1.4e-93 346.7 246 72.0
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 1.2e-92 343.6 207 77.8
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 8.8e-91 337.4 203 77.8
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 1.1e-90 337.0 207 75.8
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 1.1e-90 337.0 207 75.8
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 2.0e-90 336.3 207 77.3
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 5.7e-90 334.7 207 77.3
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 1.7e-89 333.2 203 76.8
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 2.8e-89 332.4 245 69.4
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 8.2e-89 330.9 205 75.1
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 8.2e-89 330.9 207 76.3
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 1.1e-88 330.5 224 71.9
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 1.1e-88 330.5 241 69.3
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 1.1e-88 330.5 241 69.3
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 1.4e-88 330.1 214 75.2
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 1.4e-88 330.1 199 77.4
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 1.8e-88 329.7 245 68.2
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 4.1e-88 328.6 205 77.1
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 9.1e-88 327.4 207 74.9
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 1.2e-87 327.0 207 74.9
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 1.6e-87 326.6 211 75.4
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 2.0e-87 326.2 205 74.6
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 2.6e-87 325.9 205 76.1
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 2.6e-87 325.9 217 71.9
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 4.5e-87 325.1 199 78.4
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 5.9e-87 324.7 243 67.9
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 1.0e-86 323.9 209 74.6
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 2.2e-86 322.8 205 74.6
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 2.9e-86 322.4 209 74.6
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 2.9e-86 322.4 205 74.6
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 5.0e-86 321.6 205 73.2
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 8.5e-86 320.9 207 74.9
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 1.1e-85 320.5 199 77.4
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 1.9e-85 319.7 205 75.1
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.2e-85 318.9 200 76.5
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 4.2e-85 318.5 210 73.3
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 5.5e-85 318.2 197 76.6
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 7.2e-85 317.8 200 75.5
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 9.4e-85 317.4 201 75.1
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 9.4e-85 317.4 211 71.6
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 1.2e-84 317.0 207 73.9
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 1.2e-84 317.0 204 73.5
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 2.1e-84 316.2 201 75.1
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 2.1e-84 316.2 200 75.0
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 2.1e-84 316.2 205 72.2
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 2.7e-84 315.8 198 75.8
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 3.6e-84 315.5 207 73.4
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 3.6e-84 315.5 199 76.4
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 8.0e-84 314.3 196 76.5
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 8.0e-84 314.3 211 72.0
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 2.3e-83 312.8 202 74.8
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 3.0e-83 312.4 198 75.8
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 5.2e-83 311.6 198 74.2
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 4.4e-82 308.5 197 75.1
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 7.5e-82 307.8 240 65.8
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 1.7e-81 306.6 209 69.4
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 2.2e-81 306.2 207 70.5
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 3.7e-81 305.4 230 67.0
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 1.4e-80 303.5 196 74.5
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 1.8e-80 303.1 202 73.3
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 4.1e-80 302.0 222 67.6
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 4.1e-80 302.0 203 70.9
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 7.0e-80 301.2 207 69.6
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 2.0e-79 299.7 196 73.5
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 2.7e-79 299.3 198 72.7
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 4.5e-79 298.5 197 72.1
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 1.0e-78 297.4 200 71.5
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 2.9e-78 295.8 205 69.8
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 2.9e-78 295.8 205 69.8
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 5.0e-78 295.0 214 65.9
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 5.0e-78 295.0 208 65.4
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 6.5e-78 294.7 209 68.9
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 8.5e-78 294.3 208 69.2
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 8.5e-78 294.3 208 68.8
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 8.5e-78 294.3 205 70.7
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 1.9e-77 293.1 211 67.8
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 2.5e-77 292.7 205 69.3
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 2.5e-77 292.7 204 68.1
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 3.2e-77 292.4 205 68.8
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 5.5e-77 291.6 205 68.8
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 8.0e-76 287.7 215 65.1
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 1.4e-75 287.0 202 68.8
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 3.4e-74 282.3 179 75.4
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 5.7e-74 281.6 176 77.3
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 1.3e-70 270.4 195 65.6
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 6.1e-68 261.5 197 61.9
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 5.2e-67 258.5 201 61.7
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 6.8e-67 258.1 194 61.9
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.2e-57 226.5 150 72.0
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 6.4e-57 224.9 137 78.1
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 1.4e-56 223.8 188 54.8
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 3.5e-55 219.2 133 78.9
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 1.0e-54 217.6 233 51.9
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.8e-52 209.5 233 51.5
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.9e-48 196.8 161 63.4
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 9.2e-48 194.5 141 68.1
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 3.9e-46 189.1 196 45.9
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 4.0e-43 179.1 239 45.2
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 9.9e-42 174.5 198 44.9
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 3.7e-41 172.6 155 52.3
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.0e-38 164.5 131 63.4
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 1.5e-37 160.6 112 70.5
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 3.1e-35 152.9 97 75.3
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 1.5e-34 150.6 95 72.6
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 9.9e-34 147.9 114 67.5
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 8.7e-30 134.8 97 68.0
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 5.6e-29 132.1 105 63.8
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 2.1e-28 130.2 193 37.8
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.8e-28 129.8 136 48.5
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 4.7e-28 129.0 120 55.8
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 4.0e-27 125.9 186 39.8
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 4.4e-26 122.5 135 50.4
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 1.3e-20 104.4 71 66.2
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 1.7e-17 94.0 65 69.2
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 1.6e-15 87.4 53 73.6
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 3.3e-13 79.7 51 74.5
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 7.4e-13 78.6 55 65.5
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 9.6e-13 78.2 60 63.3
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 8.1e-12 75.1 51 68.6
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.2e-10 71.2 64 59.4
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 6.0e-07 58.9 37 75.7
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 6.0e-07 58.9 68 50.0


User provided reference genes

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