Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01006283001 Vitis vinifera HOM05D000121 ORTHO05D439198 7.7e-29 129.8 66 100.0
GSVIVG01003624001 Vitis vinifera HOM05D000121 ORTHO05D441005 2.2e-28 128.3 66 98.5
GSVIVG01001732001 Vitis vinifera HOM05D000121 ORTHO05D439598 1.1e-27 125.9 66 97.0
GSVIVG01010326001 Vitis vinifera HOM05D000121 ORTHO05D000102 1.7e-12 75.5 53 73.6
MSTRG.7972 Avicennia marina HOM05D000121 ORTHO05D000102 1.4e-09 65.9 53 62.3
CSS0001753 Camellia sinensis var. sinensis HOM05D000121 ORTHO05D000102 1.4e-09 65.9 53 62.3
CSS0034881 Camellia sinensis var. sinensis HOM05D000121 ORTHO05D000102 1.4e-09 65.9 53 62.3
Manes.13G015000 Manihot esculenta HOM05D000121 ORTHO05D000102 1.4e-09 65.9 51 62.7
Potri.010G055200 Populus trichocarpa HOM05D000121 ORTHO05D000102 1.4e-09 65.9 63 55.6
Dinv14790 Davidia involucrata HOM05D000121 ORTHO05D000102 1.8e-09 65.5 51 62.7
Dinv14791 Davidia involucrata HOM05D000121 ORTHO05D019804 1.8e-09 65.5 51 62.7
TAR629G2283 Trochodendron aralioides HOM05D000121 ORTHO05D000102 1.8e-09 65.5 54 61.1
PGR119G0477 Punica granatum HOM05D000121 ORTHO05D000102 2.3e-09 65.1 50 64.0
THA.LOC104825690 Tarenaya hassleriana HOM05D000121 ORTHO05D000102 4.0e-09 64.3 57 56.1
Actinidia25752 Actinidia chinensis HOM05D000121 ORTHO05D000102 5.2e-09 63.9 51 62.7
Actinidia33266 Actinidia chinensis HOM05D000121 ORTHO05D000102 6.8e-09 63.5 51 62.7
Migut.K00689 Erythranthe guttata HOM05D000121 ORTHO05D000102 6.8e-09 63.5 53 60.4
Rhsim12G0106500 Rhododendron simsii HOM05D000121 ORTHO05D000102 6.8e-09 63.5 53 60.4
CiPaw.05G172900 Carya illinoinensis HOM05D000121 ORTHO05D000102 8.9e-09 63.2 61 57.4
Dinv14792 Davidia involucrata HOM05D000121 ORTHO05D000102 8.9e-09 63.2 50 64.0
Manes.12G015700 Manihot esculenta HOM05D000121 ORTHO05D000102 8.9e-09 63.2 51 58.8
QL03p055058 Quercus lobata HOM05D000121 ORTHO05D000102 8.9e-09 63.2 51 62.7
Sabra08G0137100 Salix brachista HOM05D000121 ORTHO05D000102 1.2e-08 62.8 63 55.6
Lj6C820T15 Lonicera japonica HOM05D000121 ORTHO05D000102 1.5e-08 62.4 51 60.8
Potri.008G179500 Populus trichocarpa HOM05D000121 ORTHO05D000102 1.5e-08 62.4 53 58.5
VMungo0251G1040 Vigna mungo HOM05D000121 ORTHO05D000102 2.0e-08 62.0 51 60.8
HanXRQChr12g0372261 Helianthus annuus HOM05D000121 ORTHO05D000102 2.6e-08 61.6 48 62.5
MSTRG.526 Avicennia marina HOM05D000121 ORTHO05D000102 3.4e-08 61.2 53 58.5
Cfa009307 Carpinus fangiana HOM05D000121 ORTHO05D000102 3.4e-08 61.2 51 62.7
unitig_747.g21133 Utricularia gibba HOM05D000121 ORTHO05D000102 3.4e-08 61.2 51 60.8
arahy.Tifrunner.gnm1.ann1.64K373 Arachis hypogaea HOM05D000121 ORTHO05D000102 4.4e-08 60.8 51 60.8
arahy.Tifrunner.gnm1.ann1.IBMY13 Arachis hypogaea HOM05D000121 ORTHO05D000102 4.4e-08 60.8 51 60.8
arahy.Tifrunner.gnm1.ann1.JPV4T4 Arachis hypogaea HOM05D000121 ORTHO05D000102 4.4e-08 60.8 51 60.8
ECA233G1741 Erigeron canadensis HOM05D000121 ORTHO05D000102 4.4e-08 60.8 58 53.4
Sabra10G0049800 Salix brachista HOM05D000121 ORTHO05D000102 4.4e-08 60.8 53 58.5
SalBow2G0637 Salvia bowleyana HOM05D000121 ORTHO05D000102 4.4e-08 60.8 52 59.6
Haze_12339 Corylus avellana HOM05D000121 ORTHO05D000102 5.8e-08 60.5 51 60.8
Cpa.g.sc43.1 Carica papaya HOM05D000121 ORTHO05D000102 7.5e-08 60.1 51 60.8
DCAR_013707 Daucus carota HOM05D000121 ORTHO05D000102 7.5e-08 60.1 53 58.5
DCAR_024080 Daucus carota HOM05D000121 ORTHO05D000102 7.5e-08 60.1 53 58.5
Medtr8g080050 Medicago truncatula HOM05D000121 ORTHO05D000102 7.5e-08 60.1 51 60.8
Eucgr.H04675 Eucalyptus grandis HOM05D000121 ORTHO05D000102 9.8e-08 59.7 51 56.9
Glyma.08G101500 Glycine max HOM05D000121 ORTHO05D000102 9.8e-08 59.7 61 54.1
Nn3g16552 Nelumbo nucifera HOM05D000121 ORTHO05D000102 9.8e-08 59.7 51 62.7
Ca_18067_v3 Cicer arietinum L. HOM05D000121 ORTHO05D000102 1.3e-07 59.3 48 62.5
Glyma.05G145000 Glycine max HOM05D000121 ORTHO05D000102 1.3e-07 59.3 61 54.1
Lj4g0014238 Lotus japonicus HOM05D000121 ORTHO05D000102 1.3e-07 59.3 51 60.8
RcHm_v2.0_Chr4g0431711 Rosa chinensis HOM05D000121 ORTHO05D000102 1.3e-07 59.3 51 58.8
PGSC0003DMG400017432 Solanum tuberosum HOM05D000121 ORTHO05D000102 1.3e-07 59.3 52 55.8
Aqoxy5G03531 Aquilegia oxysepala HOM05D000121 ORTHO05D000102 1.7e-07 58.9 54 57.4
CANSAT01G3062 Cannabis sativa HOM05D000121 ORTHO05D000102 1.7e-07 58.9 51 56.9
FAN07G2186 Fragaria x ananassa HOM05D000121 ORTHO05D000102 1.7e-07 58.9 51 54.9
FAN17G1934 Fragaria x ananassa HOM05D000121 ORTHO05D000102 1.7e-07 58.9 51 54.9
MD13G1109600 Malus domestica HOM05D000121 ORTHO05D000102 1.7e-07 58.9 51 56.9
MD16G1109500 Malus domestica HOM05D000121 ORTHO05D000102 1.7e-07 58.9 51 56.9
Nitab4.5_0000581g0170 Nicotiana tabacum HOM05D000121 ORTHO05D000102 1.7e-07 58.9 52 53.8
Peaxi162Scf00128g00825 Petunia axillaris HOM05D000121 ORTHO05D000102 1.7e-07 58.9 52 53.8
TPR.G17103 Trifolium pratense HOM05D000121 ORTHO05D000102 1.7e-07 58.9 51 56.9
Nn4g22426 Nelumbo nucifera HOM05D000121 ORTHO05D000102 2.2e-07 58.5 62 54.8
Sopen05g009510 Solanum pennellii HOM05D000121 ORTHO05D000102 2.2e-07 58.5 52 55.8
Thecc.02G273200 Theobroma cacao HOM05D000121 ORTHO05D000102 2.2e-07 58.5 51 60.8
Lsat_1_v5_gn_8_151721 Lactuca sativa HOM05D000121 ORTHO05D000102 2.9e-07 58.2 48 54.2
Phvul.002G176600 Phaseolus vulgaris HOM05D000121 ORTHO05D000102 2.9e-07 58.2 51 58.8
Psat7g079320 Pisum sativum HOM05D000121 ORTHO05D000102 2.9e-07 58.2 51 56.9
Nitab4.5_0001898g0080 Nicotiana tabacum HOM05D000121 ORTHO05D000102 3.7e-07 57.8 52 53.8
Oeu032635.1 Olea europaea HOM05D000121 ORTHO05D000102 3.7e-07 57.8 48 60.4
Prupe.1G235800 Prunus persica HOM05D000121 ORTHO05D000102 3.7e-07 57.8 51 56.9
FAN12G3499 Fragaria x ananassa HOM05D000121 ORTHO05D000102 6.4e-07 57.0 51 52.9
Cc10_g12380 Coffea canephora HOM05D000121 ORTHO05D000102 8.3e-07 56.6 51 54.9
Hma1.2p1_1557F.1_g290590 Hydrangea macrophylla HOM05D000121 ORTHO05D000102 8.3e-07 56.6 43 65.1
PGSC0003DMG400017456 Solanum tuberosum HOM05D000121 ORTHO05D000102 1.1e-06 56.2 52 51.9
Ciclev10030504m.g Citrus clementina HOM05D000121 ORTHO05D000102 1.4e-06 55.8 51 56.9
Cc11_g16490 Coffea canephora HOM05D000121 ORTHO05D000102 1.4e-06 55.8 60 50.0
COL.COLO4_23609 Corchorus olitorius HOM05D000121 ORTHO05D000102 1.4e-06 55.8 51 56.9
Sed0023218 Sechium edule HOM05D000121 ORTHO05D000102 1.4e-06 55.8 53 50.9
Sc04g0009920 Simmondsia chinensis HOM05D000121 ORTHO05D000102 1.4e-06 55.8 51 54.9
vmacro16142 Vaccinium macrocarpon HOM05D000121 ORTHO05D000102 1.4e-06 55.8 53 54.7
Duzib248G0990 Durio zibethinus HOM05D000121 ORTHO05D000102 1.9e-06 55.5 51 56.9
Prupe.1G236100 Prunus persica HOM05D000121 ORTHO05D000102 1.9e-06 55.5 48 58.3
QL03p055135 Quercus lobata HOM05D000121 ORTHO05D000102 2.4e-06 55.1 43 60.5
CDE07G1416 Ceratophyllum demersum HOM05D000121 ORTHO05D000791 3.2e-06 54.7 49 53.1
Eucgr.H04676 Eucalyptus grandis HOM05D000121 ORTHO05D000102 3.2e-06 54.7 53 50.9
Gohir.D04G181300 Gossypium hirsutum HOM05D000121 ORTHO05D000102 3.2e-06 54.7 51 56.9
Gorai.012G174600 Gossypium raimondii HOM05D000121 ORTHO05D000102 3.2e-06 54.7 51 56.9
arahy.Tifrunner.gnm1.ann1.JN5IRZ Arachis hypogaea HOM05D000121 ORTHO05D000102 5.4e-06 53.9 51 56.9
ClCG05G026280 Citrullus lanatus HOM05D000121 ORTHO05D000102 5.4e-06 53.9 51 51.0
Eucgr.H04677 Eucalyptus grandis HOM05D000121 ORTHO05D000102 5.4e-06 53.9 53 47.2
Os01g0902100 Oryza sativa ssp. japonica HOM05D000121 ORTHO05D000102 7.0e-06 53.5 51 49.0
Aqoxy5G03562 Aquilegia oxysepala HOM05D000121 ORTHO05D000102 9.2e-06 53.1 52 55.8
Hma1.2p1_0856F.1_g229120 Hydrangea macrophylla HOM05D000121 ORTHO05D000102 9.2e-06 53.1 48 58.3
Lalb_Chr07g0187281 Lupinus albus HOM05D000121 ORTHO05D000102 9.2e-06 53.1 56 48.2


User provided reference genes

Program Settings