Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 4.2e-300 1033.9 505 100.0
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 6.4e-107 392.1 252 75.0
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 2.7e-105 386.7 252 73.0
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 3.1e-101 373.2 254 68.9
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 1.1e-98 364.8 264 66.7
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 8.6e-96 355.1 245 69.8
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 9.6e-95 351.7 255 65.9
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 8.1e-94 348.6 247 68.0
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 1.1e-93 348.2 251 66.9
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 1.4e-93 347.8 262 65.3
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 2.4e-93 347.1 257 65.4
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 3.1e-93 346.7 246 67.9
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 3.1e-93 346.7 256 64.1
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 5.2e-93 345.9 258 65.5
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 6.9e-93 345.5 255 63.9
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 8.9e-93 345.1 255 65.1
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 1.5e-92 344.4 261 64.8
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 5.8e-92 342.4 256 66.0
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 7.6e-92 342.0 262 65.3
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 7.6e-92 342.0 267 62.2
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 9.9e-92 341.7 253 64.8
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 2.2e-91 340.5 267 61.4
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 3.2e-90 336.7 256 65.6
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 3.2e-90 336.7 254 61.8
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 4.2e-90 336.3 262 64.9
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 1.2e-89 334.7 254 63.8
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 1.6e-89 334.3 262 63.7
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 4.6e-89 332.8 248 65.7
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 7.8e-89 332.0 256 62.1
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 1.3e-88 331.3 248 65.3
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 6.6e-88 328.9 254 60.2
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 6.6e-88 328.9 252 63.9
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 6.6e-88 328.9 247 65.2
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 8.7e-88 328.6 256 62.5
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 1.9e-87 327.4 260 61.9
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 4.3e-87 326.2 260 63.1
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 4.3e-87 326.2 259 61.0
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 5.6e-87 325.9 260 63.1
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 7.3e-87 325.5 260 63.1
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 2.8e-86 323.6 256 61.7
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 4.8e-86 322.8 259 61.4
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 8.1e-86 322.0 259 61.4
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 1.1e-85 321.6 257 63.0
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 1.1e-85 321.6 257 63.0
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 2.4e-85 320.5 247 63.6
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 3.1e-85 320.1 258 59.7
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 4.0e-85 319.7 259 61.0
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 4.0e-85 319.7 259 61.0
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 6.9e-85 318.9 259 60.6
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 9.0e-85 318.5 256 61.7
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 1.2e-84 318.2 252 62.3
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 1.5e-84 317.8 249 62.7
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 2.0e-84 317.4 258 59.7
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 3.4e-84 316.6 265 59.6
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 4.5e-84 316.2 257 59.9
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 2.2e-83 313.9 259 59.5
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 2.2e-83 313.9 257 61.1
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 2.2e-83 313.9 257 58.4
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 2.9e-83 313.5 257 60.7
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 6.4e-83 312.4 256 60.2
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 1.9e-82 310.8 254 60.2
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 5.4e-82 309.3 256 62.1
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 5.4e-82 309.3 260 59.2
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 1.2e-81 308.1 258 61.2
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 3.9e-80 303.1 259 58.7
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 5.1e-80 302.8 259 59.5
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 6.7e-80 302.4 259 58.7
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.9e-79 300.8 260 57.7
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 5.6e-79 299.3 266 59.0
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 5.6e-79 299.3 257 58.4
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 9.6e-79 298.5 266 59.0
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 1.3e-78 298.1 259 58.3
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 3.1e-77 293.5 253 58.9
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 6.9e-77 292.4 253 56.9
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 1.7e-75 287.7 255 57.6
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 2.9e-75 287.0 256 58.6
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 4.6e-73 279.6 253 54.9
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 8.7e-72 275.4 253 55.3
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 5.6e-71 272.7 237 56.5
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 5.6e-71 272.7 264 56.4
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 5.6e-71 272.7 262 54.2
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 3.4e-68 263.5 251 54.6
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 1.6e-65 254.6 254 54.7
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 3.5e-65 253.4 257 52.9
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 5.3e-61 239.6 252 52.0
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 3.2e-58 230.3 258 53.1
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 1.5e-55 221.5 248 46.4
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 1.9e-55 221.1 238 47.5
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 1.9e-55 221.1 257 48.6
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 5.9e-52 209.5 139 66.2
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 2.9e-51 207.2 260 48.5
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 1.1e-50 205.3 259 48.6
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 2.1e-49 201.1 161 65.8
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 1.7e-46 191.4 259 48.6
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 1.8e-45 188.0 246 45.9
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 2.0e-44 184.5 229 47.6
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 6.1e-41 172.9 148 58.1
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.1e-37 160.6 245 41.6
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 3.5e-36 157.1 252 36.9
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 1.2e-33 148.7 267 35.6
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 1.4e-32 145.2 238 39.1
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 8.0e-25 119.4 190 35.3
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 7.2e-18 96.3 77 59.7
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 8.0e-17 92.8 167 34.7
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 6.3e-14 83.2 60 65.0
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 5.4e-13 80.1 147 31.3
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 3.0e-08 64.3 48 64.6
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 3.0e-08 64.3 109 35.8


User provided reference genes

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