Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01006266001 Vitis vinifera HOM05D004389 ORTHO05D005457 1.4e-96 356.3 179 100.0
Haze_04228 Corylus avellana HOM05D004389 ORTHO05D005457 1.1e-80 303.5 179 85.5
Haze_23899 Corylus avellana HOM05D004389 ORTHO05D005457 9.0e-80 300.4 178 84.3
Thecc.05G307100 Theobroma cacao HOM05D004389 ORTHO05D005457 1.5e-79 299.7 179 82.7
Dinv23968 Davidia involucrata HOM05D004389 ORTHO05D005457 2.6e-79 298.9 179 82.7
COL.COLO4_29544 Corchorus olitorius HOM05D004389 ORTHO05D005457 5.8e-79 297.7 179 81.6
Rhsim05G0143800 Rhododendron simsii HOM05D004389 ORTHO05D005457 9.9e-79 297.0 179 83.2
TAR383G0075 Trochodendron aralioides HOM05D004389 ORTHO05D005457 4.9e-78 294.7 180 81.7
CiPaw.07G015300 Carya illinoinensis HOM05D004389 ORTHO05D005457 6.4e-78 294.3 178 82.6
Cc02_g33710 Coffea canephora HOM05D004389 ORTHO05D005457 6.4e-78 294.3 179 81.6
Atru.chr2.467 Acer truncatum HOM05D004389 ORTHO05D005457 1.1e-77 293.5 179 81.6
Actinidia05713 Actinidia chinensis HOM05D004389 ORTHO05D005457 3.2e-77 292.0 179 81.0
Cfa006553 Carpinus fangiana HOM05D004389 ORTHO05D003318 4.2e-77 291.6 173 84.4
COL.COLO4_19842 Corchorus olitorius HOM05D004389 ORTHO05D005457 5.4e-77 291.2 179 80.4
vmacro19638 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 5.4e-77 291.2 180 82.8
Ciclev10018002m.g Citrus clementina HOM05D004389 ORTHO05D005457 7.1e-77 290.8 179 81.0
Duzib177G0146 Durio zibethinus HOM05D004389 ORTHO05D005457 7.1e-77 290.8 179 81.0
Eucgr.H04472 Eucalyptus grandis HOM05D004389 ORTHO05D005457 3.5e-76 288.5 179 79.9
Hma1.2p1_0666F.1_g199560 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 3.5e-76 288.5 179 80.4
Hma1.2p1_1362F.1_g278175 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 3.5e-76 288.5 179 80.4
FAN18G1342 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.3e-75 286.6 179 79.3
Aqoxy7G01925 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 2.3e-75 285.8 179 80.4
EL10Ac4g09330 Beta vulgaris HOM05D004389 ORTHO05D005457 2.3e-75 285.8 178 80.9
CSS0010710 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 3.0e-75 285.4 179 79.3
Nn8g41138 Nelumbo nucifera HOM05D004389 ORTHO05D005457 3.0e-75 285.4 179 81.6
TAR626G0408 Trochodendron aralioides HOM05D004389 ORTHO05D005457 3.0e-75 285.4 179 80.4
Medtr3g115100 Medicago truncatula HOM05D004389 ORTHO05D005457 3.9e-75 285.0 179 81.6
Gohir.A08G211800 Gossypium hirsutum HOM05D004389 ORTHO05D005457 5.1e-75 284.6 178 79.8
Gorai.004G242800 Gossypium raimondii HOM05D004389 ORTHO05D005457 5.1e-75 284.6 178 79.2
Lj7A473T46 Lonicera japonica HOM05D004389 ORTHO05D005457 5.1e-75 284.6 178 80.9
PGR031G3032 Punica granatum HOM05D004389 ORTHO05D005457 5.1e-75 284.6 173 81.5
Potri.005G036500 Populus trichocarpa HOM05D004389 ORTHO05D005457 6.6e-75 284.3 180 79.4
Gohir.D08G228501 Gossypium hirsutum HOM05D004389 ORTHO05D005457 1.1e-74 283.5 178 79.2
QL03p004595 Quercus lobata HOM05D004389 ORTHO05D005457 1.1e-74 283.5 178 80.3
PSO063G2909 Papaver somniferum HOM05D004389 ORTHO05D005457 2.5e-74 282.3 177 79.7
TWI73G0431 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 2.5e-74 282.3 179 78.8
DCAR_008416 Daucus carota HOM05D004389 ORTHO05D005457 4.3e-74 281.6 179 78.8
GSVIVG01000019001 Vitis vinifera HOM05D004389 ORTHO05D005457 4.3e-74 281.6 157 90.4
Duzib128G0997 Durio zibethinus HOM05D004389 ORTHO05D005457 5.6e-74 281.2 179 77.1
PSO782G4098 Papaver somniferum HOM05D004389 ORTHO05D005457 1.3e-73 280.0 179 78.8
AUR62006921 Chenopodium quinoa HOM05D004389 ORTHO05D005457 2.8e-73 278.9 178 79.2
MD04G1208300 Malus domestica HOM05D004389 ORTHO05D005457 2.8e-73 278.9 179 78.2
TPR.G33525 Trifolium pratense HOM05D004389 ORTHO05D005457 2.8e-73 278.9 179 80.4
AUR62005084 Chenopodium quinoa HOM05D004389 ORTHO05D005457 3.6e-73 278.5 178 78.1
Cpa.g.sc58.76 Carica papaya HOM05D004389 ORTHO05D005457 8.1e-73 277.3 179 77.1
Glyma.05G086900 Glycine max HOM05D004389 ORTHO05D005457 8.1e-73 277.3 179 78.2
FAN05G0231 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.1e-72 276.9 179 78.2
FAN05G0672 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.1e-72 276.9 179 78.2
Manes.09G078200 Manihot esculenta HOM05D004389 ORTHO05D005457 1.1e-72 276.9 179 79.9
CSS0006579 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 1.4e-72 276.6 179 78.2
AUR62000890 Chenopodium quinoa HOM05D004389 ORTHO05D005457 1.4e-72 276.6 179 78.2
CsaV3_1G039140 Cucumis sativus L. HOM05D004389 ORTHO05D005457 1.4e-72 276.6 179 79.9
MELO3C015339.2 Cucumis melo HOM05D004389 ORTHO05D005457 1.8e-72 276.2 179 79.9
Sc16g0008410 Simmondsia chinensis HOM05D004389 ORTHO05D005457 2.4e-72 275.8 179 77.7
Lj9C683G9 Lonicera japonica HOM05D004389 ORTHO05D005457 3.1e-72 275.4 178 77.0
Lj1g0012007 Lotus japonicus HOM05D004389 ORTHO05D005457 3.1e-72 275.4 179 77.7
Nitab4.5_0002329g0100 Nicotiana tabacum HOM05D004389 ORTHO05D005457 3.1e-72 275.4 179 76.0
Sabra05G0037000 Salix brachista HOM05D004389 ORTHO05D005457 3.1e-72 275.4 176 78.4
LjContig00312_ERROPOS870357g0027537 Lotus japonicus HOM05D004389 ORTHO05D005457 4.0e-72 275.0 179 77.7
FvH4_5g27531 Fragaria vesca HOM05D004389 ORTHO05D005457 5.3e-72 274.6 171 79.5
HanXRQChr14g0460141 Helianthus annuus HOM05D004389 ORTHO05D005457 6.9e-72 274.2 179 78.2
MBI16_g00840_MAGBIO Magnolia biondii HOM05D004389 ORTHO05D005457 6.9e-72 274.2 179 75.4
FAN14G5008 Fragaria x ananassa HOM05D004389 ORTHO05D005457 9.0e-72 273.9 179 77.1
FAN09G0842 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.5e-71 273.1 179 77.1
FvH4_6g05471 Fragaria vesca HOM05D004389 ORTHO05D005457 2.0e-71 272.7 179 76.5
FAN05G1752 Fragaria x ananassa HOM05D004389 ORTHO05D005457 2.6e-71 272.3 179 76.5
RcHm_v2.0_Chr3g0454251 Rosa chinensis HOM05D004389 ORTHO05D005457 2.6e-71 272.3 179 77.1
FAN05G0500 Fragaria x ananassa HOM05D004389 ORTHO05D005457 4.5e-71 271.6 179 76.5
Glyma.06G240600 Glycine max HOM05D004389 ORTHO05D005457 4.5e-71 271.6 179 77.1
Ah.04g159790 Amaranthus hybridus HOM05D004389 ORTHO05D005457 5.8e-71 271.2 179 76.5
CANSAT21G2311 Cannabis sativa HOM05D004389 ORTHO05D005457 5.8e-71 271.2 179 78.2
Ciclev10002655m.g Citrus clementina HOM05D004389 ORTHO05D005457 5.8e-71 271.2 174 77.6
Potri.013G025600 Populus trichocarpa HOM05D004389 ORTHO05D005457 5.8e-71 271.2 180 76.1
THA.LOC104805865 Tarenaya hassleriana HOM05D004389 ORTHO05D005457 5.8e-71 271.2 179 77.1
Nitab4.5_0000401g0080 Nicotiana tabacum HOM05D004389 ORTHO05D005457 1.3e-70 270.0 179 74.9
Oeu045484.1 Olea europaea HOM05D004389 ORTHO05D005457 1.3e-70 270.0 179 75.4
Prupe.6G329200 Prunus persica HOM05D004389 ORTHO05D005457 1.3e-70 270.0 179 75.4
Hund07052 Selenicereus undatus HOM05D004389 ORTHO05D005457 1.7e-70 269.6 193 71.5
Nitab4.5_0002659g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 3.8e-70 268.5 169 78.7
arahy.Tifrunner.gnm1.ann1.95MSG7 Arachis hypogaea HOM05D004389 ORTHO05D005457 6.4e-70 267.7 180 76.1
Migut.N00707 Erythranthe guttata HOM05D004389 ORTHO05D005457 1.1e-69 266.9 179 73.7
ECA236G1487 Erigeron canadensis HOM05D004389 ORTHO05D005457 1.4e-69 266.5 179 74.9
PGSC0003DMG400030976 Solanum tuberosum HOM05D004389 ORTHO05D005457 1.4e-69 266.5 179 74.9
Phvul.007G101500 Phaseolus vulgaris HOM05D004389 ORTHO05D005457 1.9e-69 266.2 179 77.1
ClCG03G016830 Citrullus lanatus HOM05D004389 ORTHO05D005457 2.4e-69 265.8 171 80.7
TWI53G0891 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 4.2e-69 265.0 177 76.3
Aa31sc17G40 Aethionema arabicum HOM05D004389 ORTHO05D005457 5.4e-69 264.6 179 76.0
SGA_v2.0_scaffold16G07733 Striga asiatica HOM05D004389 ORTHO05D005457 5.4e-69 264.6 179 73.7
vmacro08924 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 5.4e-69 264.6 221 65.6
Medtr3g096610 Medicago truncatula HOM05D004389 ORTHO05D005457 7.1e-69 264.2 173 78.0
Solyc12g009810.3 Solanum lycopersicum HOM05D004389 ORTHO05D005457 9.3e-69 263.8 178 74.7
Sopen12g004700 Solanum pennellii HOM05D004389 ORTHO05D005457 1.2e-68 263.5 179 74.9
Sabra13G0026700 Salix brachista HOM05D004389 ORTHO05D005457 1.6e-68 263.1 207 68.6
Sed0018697 Sechium edule HOM05D004389 ORTHO05D005457 2.7e-68 262.3 177 76.3
CANSAT21G1920 Cannabis sativa HOM05D004389 ORTHO05D005457 6.0e-68 261.2 179 75.4
Aa31sc17G90 Aethionema arabicum HOM05D004389 ORTHO05D005457 7.9e-68 260.8 179 74.9
Sp7g15350 Schrenkiella parvula HOM05D004389 ORTHO05D005457 1.0e-67 260.4 175 74.9
Lsat_1_v5_gn_7_96081 Lactuca sativa HOM05D004389 ORTHO05D005457 1.3e-67 260.0 176 75.6
SGA_v2.0_scaffold11G05813 Striga asiatica HOM05D004389 ORTHO05D005457 1.8e-67 259.6 173 76.3
ATR0626G001 Amborella trichopoda HOM05D004389 ORTHO05D005457 3.0e-67 258.8 179 70.9
PGSC0003DMG402007838 Solanum tuberosum HOM05D004389 ORTHO05D005457 1.5e-66 256.5 179 72.6
AUR62000567 Chenopodium quinoa HOM05D004389 ORTHO05D005457 1.9e-66 256.1 160 79.4
BcaNung00158 Brassica carinata HOM05D004389 ORTHO05D005457 7.4e-66 254.2 177 74.6
CDE02G2165 Ceratophyllum demersum HOM05D004389 ORTHO05D005457 2.1e-65 252.7 168 74.4
Zm00001eb272600 Zea mays HOM05D004389 ORTHO05D005457 2.1e-65 252.7 168 75.6
AL7G38020 Arabidopsis lyrata HOM05D004389 ORTHO05D005457 3.7e-65 251.9 175 72.6
A01p20570 Brassica napus HOM05D004389 ORTHO05D005457 3.7e-65 251.9 176 73.9
unitig_747.g21568 Utricularia gibba HOM05D004389 ORTHO05D005457 3.7e-65 251.9 182 69.8
BcaC09g50404 Brassica carinata HOM05D004389 ORTHO05D005457 8.1e-65 250.8 169 75.1
BcaB03g14176 Brassica carinata HOM05D004389 ORTHO05D005457 1.1e-64 250.4 178 72.5
C01p25870 Brassica napus HOM05D004389 ORTHO05D005457 1.4e-64 250.0 169 75.1
BolC1t02532H Brassica oleracea HOM05D004389 ORTHO05D005457 1.8e-64 249.6 169 74.6
BraA01t01985Z Brassica rapa HOM05D004389 ORTHO05D005457 2.4e-64 249.2 169 75.1
Carub.0007s2468 Capsella rubella HOM05D004389 ORTHO05D005457 3.1e-64 248.8 179 72.6
CARHR223240 Cardamine hirsuta HOM05D004389 ORTHO05D005457 4.0e-64 248.4 170 73.5
Thhalv10026361m.g Eutrema salsugineum HOM05D004389 ORTHO05D005457 6.9e-64 247.7 175 72.6
Zm00001eb264580 Zea mays HOM05D004389 ORTHO05D005457 1.2e-63 246.9 175 73.1
AT4G16710 Arabidopsis thaliana HOM05D004389 ORTHO05D005457 5.8e-63 244.6 175 71.4
HPP92_010418 Vanilla planifolia HOM05D004389 ORTHO05D005457 1.7e-62 243.0 169 74.6
Rhsim05G0010600 Rhododendron simsii HOM05D004389 ORTHO05D005457 2.9e-62 242.3 212 63.2
Peaxi162Scf00523g00530 Petunia axillaris HOM05D004389 ORTHO05D005457 2.5e-61 239.2 174 70.1
SEGI_15909 Sequoiadendron giganteum HOM05D004389 ORTHO05D005457 1.8e-59 233.0 175 67.4
HanXRQChr04g0126711 Helianthus annuus HOM05D004389 ORTHO05D005457 6.7e-59 231.1 178 69.1
RcHm_v2.0_Chr7g0218901 Rosa chinensis HOM05D004389 ORTHO05D005457 2.5e-58 229.2 147 77.6
Psat0s2070g0160 Pisum sativum HOM05D004389 ORTHO05D005457 4.3e-58 228.4 150 78.0
Psat0s1802g0120 Pisum sativum HOM05D004389 ORTHO05D005457 1.3e-57 226.9 150 77.3
Lalb_Chr05g0219701 Lupinus albus HOM05D004389 ORTHO05D005457 1.3e-54 216.9 179 65.4
Dinv40263 Davidia involucrata HOM05D004389 ORTHO05D005457 1.2e-52 210.3 120 89.2
vmacro22564 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 2.8e-49 199.1 170 64.7
Aqoxy4G02160 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 7.7e-47 191.0 129 77.5
AagrBONN_evm.TU.Sc2ySwM_117.3666 Anthoceros agrestis HOM05D004389 ORTHO05D005457 3.2e-45 185.7 172 56.4
Peaxi162Scf02135g00022 Petunia axillaris HOM05D004389 ORTHO05D005457 1.6e-44 183.3 171 60.2
AagrBONN_evm.TU.Sc2ySwM_344.4143 Anthoceros agrestis HOM05D007251 ORTHO05D009266 4.6e-44 181.8 179 53.6
Prupe.5G030200 Prunus persica HOM05D004389 ORTHO05D005457 3.0e-43 179.1 117 80.3
Mapoly0013s0083 Marchantia polymorpha HOM05D004389 ORTHO05D005457 5.1e-43 178.3 168 53.0
SMO171G0140 Selaginella moellendorffii HOM05D004389 ORTHO05D005457 5.1e-43 178.3 165 55.8
Pp3c11_4930 Physcomitrium patens HOM05D004389 ORTHO05D005457 1.5e-42 176.8 165 53.9
Os02g0467700 Oryza sativa ssp. japonica HOM05D004389 ORTHO05D005457 2.0e-42 176.4 115 77.4
vmacro15018 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 5.5e-37 158.3 164 56.7
PRCOL_00003734 Prasinoderma coloniale HOM05D004389 ORTHO05D005457 3.6e-36 155.6 162 51.9
CBR_g24390 Chara braunii HOM05D004389 ORTHO05D005457 4.7e-36 155.2 222 42.8
vmacro22211 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 6.7e-35 151.4 188 52.7
Cre13.g585850 Chlamydomonas reinhardtii HOM05D004389 ORTHO05D005457 2.0e-34 149.8 172 50.6
CAN.G551.74 Capsicum annuum HOM05D004389 ORTHO05D005457 4.4e-34 148.7 104 72.1
Ca_16978_v3 Cicer arietinum L. HOM05D004389 ORTHO05D005457 4.1e-32 142.1 86 81.4
Zm00001eb058290 Zea mays HOM05D004389 ORTHO05D005457 5.3e-32 141.7 83 80.7
MCO09G816 Micromonas commoda HOM05D004389 ORTHO05D005457 1.2e-31 140.6 162 46.3
TPR.G33563 Trifolium pratense HOM05D004389 ORTHO05D005457 1.0e-30 137.5 83 79.5
Aqoxy5G02271 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 5.0e-30 135.2 94 71.3
RhsimUnG0192500 Rhododendron simsii HOM05D004389 ORTHO05D005457 8.5e-30 134.4 106 67.0
SHI18162 Sapria himalayana HOM05D004389 ORTHO05D005457 8.5e-30 134.4 139 54.7
TPR.G30972 Trifolium pratense HOM05D004389 ORTHO05D005457 1.2e-28 130.6 88 73.9
Nitab4.5_0006964g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 1.8e-27 126.7 93 66.7
MD15G1188200 Malus domestica HOM05D004389 ORTHO05D005457 9.7e-26 120.9 117 58.1
FvH4_6g10990 Fragaria vesca HOM05D004389 ORTHO05D005457 2.2e-25 119.8 97 64.9
Actinidia39666 Actinidia chinensis HOM05D004389 ORTHO05D056204 2.6e-23 112.8 144 50.0
QL07p009462 Quercus lobata HOM05D004389 ORTHO05D005457 4.5e-23 112.1 75 77.3
Zm00001eb380920 Zea mays HOM05D004389 ORTHO05D005457 8.5e-22 107.8 85 64.7
Cfa025624 Carpinus fangiana HOM05D004389 ORTHO05D125512 4.2e-13 79.0 212 32.5
vmacro15154 Vaccinium macrocarpon HOM05D004389 ORTHO05D022937 5.5e-13 78.6 60 66.7
Medtr6g452950 Medicago truncatula HOM05D029366 ORTHO05D022937 2.3e-11 73.2 54 63.0
vmacro17239 Vaccinium macrocarpon HOM05D040504 ORTHO05D426804 1.2e-10 70.9 160 35.6
SHI18161 Sapria himalayana HOM05D004389 ORTHO05D005457 1.5e-10 70.5 50 64.0
QL07p009230 Quercus lobata HOM05D004389 ORTHO05D005457 1.3e-09 67.4 85 49.4
HPP92_010328 Vanilla planifolia HOM05D004389 ORTHO05D022937 2.2e-09 66.6 42 71.4


User provided reference genes

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