Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01006163001 Vitis vinifera HOM05D000499 ORTHO05D036950 6.9e-42 173.7 98 100.0
GSVIVG01005212001 Vitis vinifera HOM05D000499 ORTHO05D002036 5.0e-40 167.5 103 95.1
Dinv07563 Davidia involucrata HOM05D000499 ORTHO05D002036 2.0e-20 102.4 100 59.0
Actinidia39463 Actinidia chinensis HOM05D000499 ORTHO05D002036 1.7e-16 89.4 100 51.0
TAR625G0107 Trochodendron aralioides HOM05D000499 ORTHO05D002036 6.5e-16 87.4 96 46.9
TAR627G0888 Trochodendron aralioides HOM05D000499 ORTHO05D002036 1.5e-15 86.3 90 48.9
TAR629G2874 Trochodendron aralioides HOM05D000499 ORTHO05D002036 1.5e-15 86.3 96 49.0
Manes.16G028300 Manihot esculenta HOM05D000499 ORTHO05D002036 7.2e-15 84.0 102 53.9
Potri.004G044100 Populus trichocarpa HOM05D000499 ORTHO05D002036 1.2e-14 83.2 107 53.3
vmacro23041 Vaccinium macrocarpon HOM05D000499 ORTHO05D002036 3.6e-14 81.6 100 50.0
PSO675G0580 Papaver somniferum HOM05D000499 ORTHO05D002036 4.7e-14 81.3 96 53.1
DCAR_028066 Daucus carota HOM05D000499 ORTHO05D002036 8.0e-14 80.5 95 49.5
Ca_18546_v3 Cicer arietinum L. HOM05D000499 ORTHO05D002036 1.0e-13 80.1 98 49.0
Ca_29972_v3 Cicer arietinum L. HOM05D000499 ORTHO05D002036 1.0e-13 80.1 98 49.0
DCAR_004075 Daucus carota HOM05D000499 ORTHO05D002036 1.0e-13 80.1 94 50.0
TAR633G1432 Trochodendron aralioides HOM05D000499 ORTHO05D002036 1.0e-13 80.1 96 46.9
PGSC0003DMG400029726 Solanum tuberosum HOM05D000499 ORTHO05D002036 1.4e-13 79.7 93 50.5
Peaxi162Scf00461g00310 Petunia axillaris HOM05D000499 ORTHO05D002036 1.8e-13 79.3 92 52.2
QL05p040593 Quercus lobata HOM05D000499 ORTHO05D002036 2.3e-13 79.0 111 45.9
MD10G1293800 Malus domestica HOM05D000499 ORTHO05D002036 3.0e-13 78.6 109 51.4
Prupe.4G048000 Prunus persica HOM05D000499 ORTHO05D002036 4.0e-13 78.2 111 49.5
MD05G1338900 Malus domestica HOM05D000499 ORTHO05D002036 5.2e-13 77.8 105 50.5
TAR626G1356 Trochodendron aralioides HOM05D000499 ORTHO05D002036 5.2e-13 77.8 121 41.3
Nn1g06530 Nelumbo nucifera HOM05D000499 ORTHO05D002036 6.8e-13 77.4 85 54.1
PSO541G4012 Papaver somniferum HOM05D000499 ORTHO05D002036 6.8e-13 77.4 96 51.0
Oeu050849.2 Olea europaea HOM05D000499 ORTHO05D002036 8.8e-13 77.0 111 46.8
TWI38G1982 Tripterygium wilfordii HOM05D000499 ORTHO05D002036 8.8e-13 77.0 105 51.4
TAR624G0906 Trochodendron aralioides HOM05D000499 ORTHO05D002036 8.8e-13 77.0 97 46.4
Glyma.15G074500 Glycine max HOM05D000499 ORTHO05D002036 1.2e-12 76.6 95 47.4
Oeu016092.1 Olea europaea HOM05D000499 ORTHO05D002036 1.2e-12 76.6 100 47.0
TWI63G0171 Tripterygium wilfordii HOM05D000499 ORTHO05D002036 1.2e-12 76.6 99 49.5
Ca_00338_v3 Cicer arietinum L. HOM05D000499 ORTHO05D002036 1.5e-12 76.3 98 45.9
Cpa.g.sc27.31 Carica papaya HOM05D000499 ORTHO05D002036 2.0e-12 75.9 98 49.0
CsaV3_1G012320 Cucumis sativus L. HOM05D000499 ORTHO05D002036 2.6e-12 75.5 98 50.0
Medtr4g088785 Medicago truncatula HOM05D000499 ORTHO05D002036 2.6e-12 75.5 98 48.0
Solyc03g006430.3 Solanum lycopersicum HOM05D000499 ORTHO05D002036 2.6e-12 75.5 90 47.8
MSTRG.14701 Avicennia marina HOM05D000499 ORTHO05D002036 3.4e-12 75.1 94 51.1
Eucgr.D00618 Eucalyptus grandis HOM05D000499 ORTHO05D002036 3.4e-12 75.1 99 48.5
TWI38G1287 Tripterygium wilfordii HOM05D000499 ORTHO05D002036 3.4e-12 75.1 91 49.5
arahy.Tifrunner.gnm1.ann1.1B8730 Arachis hypogaea HOM05D000499 ORTHO05D002036 4.4e-12 74.7 97 45.4
Potri.011G053000 Populus trichocarpa HOM05D000499 ORTHO05D002036 4.4e-12 74.7 110 46.4
Sopen03g002440 Solanum pennellii HOM05D000499 ORTHO05D002036 4.4e-12 74.7 90 46.7
Thecc.06G186600 Theobroma cacao HOM05D000499 ORTHO05D002036 4.4e-12 74.7 103 47.6
Lsat_1_v5_gn_7_21361 Lactuca sativa HOM05D000499 ORTHO05D002036 5.7e-12 74.3 100 47.0
Sed0021467 Sechium edule HOM05D000499 ORTHO05D002036 5.7e-12 74.3 98 53.1
vmacro11865 Vaccinium macrocarpon HOM05D000499 ORTHO05D002036 5.7e-12 74.3 92 46.7
MELO3C002605.2 Cucumis melo HOM05D000499 ORTHO05D002036 7.5e-12 73.9 98 50.0
Glyma.13G238800 Glycine max HOM05D000499 ORTHO05D002036 7.5e-12 73.9 95 44.2
ClCG03G006070 Citrullus lanatus HOM05D000499 ORTHO05D002036 9.8e-12 73.6 98 51.0
Cc02_g13410 Coffea canephora HOM05D000499 ORTHO05D002036 9.8e-12 73.6 98 44.9
Peaxi162Scf00661g00017 Petunia axillaris HOM05D000499 ORTHO05D002036 1.3e-11 73.2 97 45.4
Phvul.002G228900 Phaseolus vulgaris HOM05D000499 ORTHO05D002036 1.3e-11 73.2 98 45.9
Phvul.006G185100 Phaseolus vulgaris HOM05D000499 ORTHO05D002036 1.7e-11 72.8 94 47.9
PGSC0003DMG400012823 Solanum tuberosum HOM05D000499 ORTHO05D002036 1.7e-11 72.8 92 46.7
EL10Ac4g08176 Beta vulgaris HOM05D000499 ORTHO05D002036 2.2e-11 72.4 96 44.8
HanXRQChr17g0560211 Helianthus annuus HOM05D000499 ORTHO05D002036 2.2e-11 72.4 96 50.0
arahy.Tifrunner.gnm1.ann1.TCFV76 Arachis hypogaea HOM05D000499 ORTHO05D002036 2.8e-11 72.0 97 44.3
Solyc02g078180.3 Solanum lycopersicum HOM05D000499 ORTHO05D002036 2.8e-11 72.0 94 47.9
Sopen02g023040 Solanum pennellii HOM05D000499 ORTHO05D002036 2.8e-11 72.0 94 47.9
TPR.G16504 Trifolium pratense HOM05D000499 ORTHO05D036950 2.8e-11 72.0 98 44.9
CSS0010201 Camellia sinensis var. sinensis HOM05D000499 ORTHO05D002036 3.7e-11 71.6 99 45.5
CSS0041261 Camellia sinensis var. sinensis HOM05D000499 ORTHO05D002036 3.7e-11 71.6 103 44.7
Medtr2g013690 Medicago truncatula HOM05D000499 ORTHO05D002036 3.7e-11 71.6 99 46.5
PGR004G2336 Punica granatum HOM05D000499 ORTHO05D002036 3.7e-11 71.6 100 49.0
Sed0016796 Sechium edule HOM05D000499 ORTHO05D002036 3.7e-11 71.6 92 51.1
CAN.G289.49 Capsicum annuum HOM05D000499 ORTHO05D002036 4.8e-11 71.2 93 48.4
CAN.G1164.39 Capsicum annuum HOM05D000499 ORTHO05D002036 8.3e-11 70.5 91 47.3
Lalb_Chr16g0383781 Lupinus albus HOM05D000499 ORTHO05D002036 8.3e-11 70.5 95 48.4
Psat1g204760 Pisum sativum HOM05D000499 ORTHO05D002036 8.3e-11 70.5 98 44.9
DCAR_019553 Daucus carota HOM05D000499 ORTHO05D002036 1.1e-10 70.1 99 49.5
Manes.17G046100 Manihot esculenta HOM05D000499 ORTHO05D002036 1.1e-10 70.1 98 49.0
Atru.chr2.2609 Acer truncatum HOM05D000499 ORTHO05D002036 2.4e-10 68.9 93 47.3
Ciclev10014620m.g Citrus clementina HOM05D000499 ORTHO05D002036 2.4e-10 68.9 104 48.1
COL.COLO4_31465 Corchorus olitorius HOM05D000499 ORTHO05D002036 2.4e-10 68.9 86 46.5
Lalb_Chr09g0327651 Lupinus albus HOM05D000499 ORTHO05D002036 2.4e-10 68.9 102 46.1
CSS0046246 Camellia sinensis var. sinensis HOM05D000499 ORTHO05D002036 3.1e-10 68.6 100 49.0
CiPaw.09G060500 Carya illinoinensis HOM05D000499 ORTHO05D002036 3.1e-10 68.6 108 45.4
Sabra11G0036800 Salix brachista HOM05D000499 ORTHO05D002036 3.1e-10 68.6 104 48.1
VMungo0540G0864 Vigna mungo HOM05D000499 ORTHO05D002036 3.1e-10 68.6 90 47.8
Glyma.13G179300 Glycine max HOM05D000499 ORTHO05D002036 4.1e-10 68.2 98 43.9
SGA_v2.0_scaffold100G29687 Striga asiatica HOM05D000499 ORTHO05D002036 4.1e-10 68.2 98 43.9
CDE08G1161 Ceratophyllum demersum HOM05D000499 ORTHO05D002036 5.4e-10 67.8 97 45.4
Migut.M01139 Erythranthe guttata HOM05D000499 ORTHO05D002036 5.4e-10 67.8 94 47.9
MELO3C016700.2 Cucumis melo HOM05D000499 ORTHO05D002036 7.0e-10 67.4 93 48.4
SGA_v2.0_scaffold22G09714 Striga asiatica HOM05D000499 ORTHO05D002036 9.1e-10 67.0 92 42.4
GSVIVG01014338001 Vitis vinifera HOM05D000499 ORTHO05D002036 9.1e-10 67.0 97 49.5
Lj4g0005805 Lotus japonicus HOM05D000499 ORTHO05D002036 1.2e-09 66.6 102 48.0
MBI07_g30179_MAGBIO Magnolia biondii HOM05D000499 ORTHO05D002036 1.2e-09 66.6 85 44.7
Rhsim06G0199100 Rhododendron simsii HOM05D000499 ORTHO05D002036 1.2e-09 66.6 92 43.5
VMungo0251G2639 Vigna mungo HOM05D000499 ORTHO05D002036 1.2e-09 66.6 98 40.8
Hma1.2p1_0885F.1_g232570 Hydrangea macrophylla HOM05D000499 ORTHO05D002036 2.0e-09 65.9 93 47.3
CiPaw.12G118300 Carya illinoinensis HOM05D000499 ORTHO05D002036 2.7e-09 65.5 94 45.7
Gohir.A06G127100 Gossypium hirsutum HOM05D000499 ORTHO05D002036 2.7e-09 65.5 88 46.6
CsaV3_4G033710 Cucumis sativus L. HOM05D000499 ORTHO05D002036 3.5e-09 65.1 91 46.2
Duzib160G0480 Durio zibethinus HOM05D000499 ORTHO05D002036 4.5e-09 64.7 93 43.0
Nitab4.5_0001336g0020 Nicotiana tabacum HOM05D000499 ORTHO05D002036 4.5e-09 64.7 93 41.9
PGSC0003DMG400022812 Solanum tuberosum HOM05D000499 ORTHO05D002036 4.5e-09 64.7 88 44.3
Nitab4.5_0001796g0030 Nicotiana tabacum HOM05D000499 ORTHO05D002036 5.9e-09 64.3 93 41.9
Thecc.07G089600 Theobroma cacao HOM05D000499 ORTHO05D002036 5.9e-09 64.3 96 40.6
Aqoxy4G00785 Aquilegia oxysepala HOM05D000499 ORTHO05D002036 7.7e-09 63.9 85 43.5
Gohir.A13G145700 Gossypium hirsutum HOM05D000499 ORTHO05D002036 7.7e-09 63.9 90 43.3
CiPaw.11G169700 Carya illinoinensis HOM05D000499 ORTHO05D002036 1.0e-08 63.5 100 40.0
Glyma.07G197000 Glycine max HOM05D000499 ORTHO05D002036 1.0e-08 63.5 98 42.9
Lj1C843T11 Lonicera japonica HOM05D000499 ORTHO05D002036 1.0e-08 63.5 91 48.4
TPR.G39015 Trifolium pratense HOM05D000499 ORTHO05D002036 1.0e-08 63.5 88 46.6
Aqoxy1G02409 Aquilegia oxysepala HOM05D000499 ORTHO05D002036 1.7e-08 62.8 99 44.4
Haze_09427 Corylus avellana HOM05D000499 ORTHO05D002036 1.7e-08 62.8 96 41.7
Dinv20172 Davidia involucrata HOM05D000499 ORTHO05D002036 1.7e-08 62.8 89 46.1
Peaxi162Scf00069g01425 Petunia axillaris HOM05D000499 ORTHO05D002036 1.7e-08 62.8 93 40.9
Cfa000467 Carpinus fangiana HOM05D000499 ORTHO05D002036 2.2e-08 62.4 93 44.1
Gohir.A01G063600 Gossypium hirsutum HOM05D000499 ORTHO05D002036 2.2e-08 62.4 89 46.1
Gohir.D06G132000 Gossypium hirsutum HOM05D000499 ORTHO05D002036 2.2e-08 62.4 89 48.3
Gorai.010G153800 Gossypium raimondii HOM05D000499 ORTHO05D002036 2.2e-08 62.4 89 48.3
Sabra04G0027300 Salix brachista HOM05D000499 ORTHO05D002036 2.2e-08 62.4 95 47.4
CAN.G162.61 Capsicum annuum HOM05D000499 ORTHO05D002036 2.9e-08 62.0 93 43.0
HanXRQChr10g0279241 Helianthus annuus HOM05D000499 ORTHO05D002036 2.9e-08 62.0 91 45.1
Solyc10g009050.3 Solanum lycopersicum HOM05D000499 ORTHO05D002036 2.9e-08 62.0 88 44.3
Gorai.002G069900 Gossypium raimondii HOM05D000499 ORTHO05D002036 3.8e-08 61.6 89 46.1
PSO832G1660 Papaver somniferum HOM05D000499 ORTHO05D002036 3.8e-08 61.6 93 50.5
Solyc07g063150.3 Solanum lycopersicum HOM05D000499 ORTHO05D002036 3.8e-08 61.6 93 40.9
PGSC0003DMG400012417 Solanum tuberosum HOM05D000499 ORTHO05D002036 3.8e-08 61.6 96 42.7
Gohir.D13G150600 Gossypium hirsutum HOM05D000499 ORTHO05D002036 5.0e-08 61.2 90 41.1
PSO210G6392 Papaver somniferum HOM05D000499 ORTHO05D002036 5.0e-08 61.2 93 41.9
unitig_21.g20219 Utricularia gibba HOM05D000499 ORTHO05D002036 5.0e-08 61.2 100 41.0
arahy.Tifrunner.gnm1.ann1.3F75VG Arachis hypogaea HOM05D000499 ORTHO05D002036 6.5e-08 60.8 97 39.2
THA.LOC104810473 Tarenaya hassleriana HOM05D000499 ORTHO05D002036 6.5e-08 60.8 93 43.0
AUR62019422 Chenopodium quinoa HOM05D000499 ORTHO05D002036 1.1e-07 60.1 90 41.1
Lalb_Chr18g0059611 Lupinus albus HOM05D000499 ORTHO05D002036 1.1e-07 60.1 102 45.1
Ciclev10007828m.g Citrus clementina HOM05D000499 ORTHO05D002036 1.5e-07 59.7 97 44.3
Duzib192G0883 Durio zibethinus HOM05D000499 ORTHO05D002036 1.5e-07 59.7 86 41.9
Oeu050846.1 Olea europaea HOM05D000499 ORTHO05D036950 1.5e-07 59.7 88 45.5
Potri.011G119300 Populus trichocarpa HOM05D000499 ORTHO05D002036 1.5e-07 59.7 92 39.1
Sopen10g004830 Solanum pennellii HOM05D000499 ORTHO05D002036 1.5e-07 59.7 88 44.3
Lalb_Chr25g0286371 Lupinus albus HOM05D000499 ORTHO05D002036 1.9e-07 59.3 88 40.9
RcHm_v2.0_Chr5g0008541 Rosa chinensis HOM05D000499 ORTHO05D002036 1.9e-07 59.3 37 75.7
Ca_01844_v3 Cicer arietinum L. HOM05D000499 ORTHO05D002036 2.5e-07 58.9 88 42.0
Medtr2g085170 Medicago truncatula HOM05D000499 ORTHO05D002036 2.5e-07 58.9 88 43.2
Duzib170G0661 Durio zibethinus HOM05D000499 ORTHO05D002036 3.2e-07 58.5 96 37.5
PGR083G1364 Punica granatum HOM05D000499 ORTHO05D002036 3.2e-07 58.5 98 41.8
Duzib213G0506 Durio zibethinus HOM05D000499 ORTHO05D002036 4.2e-07 58.2 90 36.7
FvH4_3g09110 Fragaria vesca HOM05D000499 ORTHO05D002036 4.2e-07 58.2 36 77.8
FAN11G1170 Fragaria x ananassa HOM05D000499 ORTHO05D002036 4.2e-07 58.2 36 77.8
FAN16G3077 Fragaria x ananassa HOM05D000499 ORTHO05D002036 4.2e-07 58.2 36 77.8
Gohir.D01G050000 Gossypium hirsutum HOM05D000499 ORTHO05D002036 4.2e-07 58.2 89 44.9
Sabra16G0262300 Salix brachista HOM05D000499 ORTHO05D002036 4.2e-07 58.2 89 41.6
Psat5g244240 Pisum sativum HOM05D000499 ORTHO05D002036 5.5e-07 57.8 89 42.7
CANSAT35G1760 Cannabis sativa HOM05D000499 ORTHO05D002036 9.4e-07 57.0 100 40.0
AUR62034296 Chenopodium quinoa HOM05D000499 ORTHO05D002036 9.4e-07 57.0 99 37.4
Gorai.013G168400 Gossypium raimondii HOM05D000499 ORTHO05D002036 9.4e-07 57.0 90 40.0
Peaxi162Scf00530g00118 Petunia axillaris HOM05D000499 ORTHO05D002036 9.4e-07 57.0 88 40.9
Cpa.g.sc80.64 Carica papaya HOM05D000499 ORTHO05D002036 1.2e-06 56.6 86 39.5
Nitab4.5_0003348g0060 Nicotiana tabacum HOM05D000499 ORTHO05D002036 1.2e-06 56.6 88 42.0
Eucgr.F01129 Eucalyptus grandis HOM05D000499 ORTHO05D002036 1.6e-06 56.2 95 38.9
Lj3g0024276 Lotus japonicus HOM05D000499 ORTHO05D002036 1.6e-06 56.2 89 41.6
Prupe.4G181200 Prunus persica HOM05D000499 ORTHO05D002036 1.6e-06 56.2 87 43.7
THA.LOC104815554 Tarenaya hassleriana HOM05D000499 ORTHO05D002036 1.6e-06 56.2 90 43.3
FAN25G2885 Fragaria x ananassa HOM05D000499 ORTHO05D002036 2.1e-06 55.8 45 66.7
Manes.03G110100 Manihot esculenta HOM05D000499 ORTHO05D002036 2.1e-06 55.8 93 39.8
SEGI_34771 Sequoiadendron giganteum HOM05D000499 ORTHO05D002036 2.1e-06 55.8 110 42.7
unitig_744.g24535 Utricularia gibba HOM05D000499 ORTHO05D002036 2.7e-06 55.5 96 35.4
EL10Ac8g20386 Beta vulgaris HOM05D000499 ORTHO05D002036 3.6e-06 55.1 91 49.5
FAN16G3624 Fragaria x ananassa HOM05D000499 ORTHO05D002036 3.6e-06 55.1 89 41.6
Atru.chr10.1874 Acer truncatum HOM05D000499 ORTHO05D002036 4.7e-06 54.7 93 44.1
BcaB03g12120 Brassica carinata HOM05D000499 ORTHO05D002036 4.7e-06 54.7 100 42.0
CSS0049256 Camellia sinensis var. sinensis HOM05D000499 ORTHO05D002036 4.7e-06 54.7 94 37.2
CANSAT56G3971 Cannabis sativa HOM05D000499 ORTHO05D002036 4.7e-06 54.7 92 39.1
Cc05_g12030 Coffea canephora HOM05D000499 ORTHO05D002036 4.7e-06 54.7 91 45.1
Os05g0531500 Oryza sativa ssp. japonica HOM05D000499 ORTHO05D002036 4.7e-06 54.7 32 71.9
Zm00001eb353780 Zea mays HOM05D000499 ORTHO05D002036 4.7e-06 54.7 100 43.0
MSTRG.15884 Avicennia marina HOM05D000499 ORTHO05D002036 6.1e-06 54.3 98 39.8
Sp1g24450 Schrenkiella parvula HOM05D000499 ORTHO05D002036 6.1e-06 54.3 86 44.2
SGA_v2.0_scaffold49G18294 Striga asiatica HOM05D000499 ORTHO05D002036 6.1e-06 54.3 86 41.9


User provided reference genes

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