Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01006138001 Vitis vinifera HOM05D006242 ORTHO05D007936 2.4e-47 191.8 95 100.0
GSVIVG01012122001 Vitis vinifera HOM05D006242 ORTHO05D007936 2.4e-47 191.8 95 100.0
Dinv10532 Davidia involucrata HOM05D006242 ORTHO05D007936 1.5e-41 172.6 95 89.5
Prupe.4G115300 Prunus persica HOM05D006242 ORTHO05D007936 9.7e-41 169.9 92 89.1
Actinidia22421 Actinidia chinensis HOM05D006242 ORTHO05D007936 1.7e-40 169.1 95 89.5
TWI38G1455 Tripterygium wilfordii HOM05D006242 ORTHO05D007936 3.7e-40 167.9 95 86.3
Nn7g38280 Nelumbo nucifera HOM05D006242 ORTHO05D007936 8.2e-40 166.8 95 86.3
Rhsim06G0063600 Rhododendron simsii HOM05D006242 ORTHO05D007936 8.2e-40 166.8 95 87.4
Nitab4.5_0008021g0020 Nicotiana tabacum HOM05D006242 ORTHO05D007936 2.4e-39 165.2 95 84.2
MD10G1229500 Malus domestica HOM05D006242 ORTHO05D007936 3.1e-39 164.9 92 88.0
Sc17g0004220 Simmondsia chinensis HOM05D006242 ORTHO05D007936 6.9e-39 163.7 95 84.2
Atru.chr10.429 Acer truncatum HOM05D006242 ORTHO05D007936 9.1e-39 163.3 94 83.0
QL11p013482 Quercus lobata HOM05D006242 ORTHO05D007936 9.1e-39 163.3 92 87.0
Cfa000677 Carpinus fangiana HOM05D006242 ORTHO05D007936 1.2e-38 162.9 92 85.9
Haze_06141 Corylus avellana HOM05D006242 ORTHO05D007936 1.2e-38 162.9 92 85.9
Manes.03G074100 Manihot esculenta HOM05D006242 ORTHO05D007936 1.2e-38 162.9 95 84.2
Gohir.A12G048500 Gossypium hirsutum HOM05D006242 ORTHO05D007936 1.5e-38 162.5 95 86.3
Hma1.2p1_1700F.1_g298200 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 2.6e-38 161.8 95 83.2
Hma1.2p1_1700F.1_g298210 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 2.6e-38 161.8 95 83.2
FvH4_3g12650 Fragaria vesca HOM05D006242 ORTHO05D007936 3.4e-38 161.4 92 83.7
RcHm_v2.0_Chr5g0020621 Rosa chinensis HOM05D006242 ORTHO05D007936 4.5e-38 161.0 92 82.6
Gohir.D12G047300 Gossypium hirsutum HOM05D006242 ORTHO05D007936 5.9e-38 160.6 95 85.3
DCAR_007782 Daucus carota HOM05D006242 ORTHO05D007936 7.7e-38 160.2 95 81.1
Thecc.02G006000 Theobroma cacao HOM05D006242 ORTHO05D007936 7.7e-38 160.2 95 85.3
FAN25G2599 Fragaria x ananassa HOM05D006242 ORTHO05D007936 1.0e-37 159.8 92 82.6
Hma1.2p1_1499F.1_g287250 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.3e-37 159.5 95 82.1
Hma1.2p1_1499F.1_g287260 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.3e-37 159.5 95 82.1
Oeu058943.1 Olea europaea HOM05D006242 ORTHO05D007936 1.3e-37 159.5 95 81.1
FAN21G1956 Fragaria x ananassa HOM05D006242 ORTHO05D007936 1.7e-37 159.1 92 82.6
Gorai.008G050000 Gossypium raimondii HOM05D006242 ORTHO05D007936 1.7e-37 159.1 95 84.2
Cc09_g05740 Coffea canephora HOM05D006242 ORTHO05D007936 3.8e-37 157.9 95 77.9
Glyma.20G074000 Glycine max HOM05D006242 ORTHO05D007936 6.5e-37 157.1 95 76.8
Potri.001G159600 Populus trichocarpa HOM05D006242 ORTHO05D007936 6.5e-37 157.1 93 81.7
CAN.G79.44 Capsicum annuum HOM05D006242 ORTHO05D007936 8.5e-37 156.8 95 81.1
Duzib248G1438 Durio zibethinus HOM05D006242 ORTHO05D007936 8.5e-37 156.8 95 84.2
SpUn0157_0010 Schrenkiella parvula HOM05D006242 ORTHO05D007936 8.5e-37 156.8 95 78.9
Lj6g0025800 Lotus japonicus HOM05D006242 ORTHO05D007936 1.1e-36 156.4 94 77.7
Sp2g07040 Schrenkiella parvula HOM05D006242 ORTHO05D007936 2.5e-36 155.2 95 80.0
Ciclev10016161m.g Citrus clementina HOM05D006242 ORTHO05D007936 3.2e-36 154.8 93 79.6
FAN16G0457 Fragaria x ananassa HOM05D006242 ORTHO05D007936 3.2e-36 154.8 89 83.1
CANSAT35G0032 Cannabis sativa HOM05D006242 ORTHO05D007936 4.2e-36 154.5 95 80.0
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 9.4e-36 153.3 95 78.9
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 9.4e-36 153.3 95 78.9
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 9.4e-36 153.3 95 78.9
PSO675G0930 Papaver somniferum HOM05D006242 ORTHO05D007936 9.4e-36 153.3 95 74.7
Sabra01G0132400 Salix brachista HOM05D006242 ORTHO05D007936 9.4e-36 153.3 93 81.7
Aqoxy1G01391 Aquilegia oxysepala HOM05D006242 ORTHO05D007936 1.2e-35 152.9 94 78.7
Carub.0004s1673 Capsella rubella HOM05D006242 ORTHO05D007936 1.6e-35 152.5 95 74.7
Thhalv10017018m.g Eutrema salsugineum HOM05D006242 ORTHO05D007936 1.6e-35 152.5 95 75.8
PSO541G0450 Papaver somniferum HOM05D006242 ORTHO05D007936 1.6e-35 152.5 95 74.7
AL4G31060 Arabidopsis lyrata HOM05D006242 ORTHO05D007936 2.7e-35 151.8 95 74.7
Cc00_g22870 Coffea canephora HOM05D006242 ORTHO05D007936 2.7e-35 151.8 95 75.8
Lj6g0012918 Lotus japonicus HOM05D006242 ORTHO05D007936 2.7e-35 151.8 94 75.5
Phvul.007G242500 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 2.7e-35 151.8 94 75.5
Solyc02g031980.3 Solanum lycopersicum HOM05D006242 ORTHO05D007936 4.7e-35 151.0 95 76.8
Sopen02g010240 Solanum pennellii HOM05D006242 ORTHO05D007936 7.9e-35 150.2 95 76.8
PGSC0003DMG400014939 Solanum tuberosum HOM05D006242 ORTHO05D007936 7.9e-35 150.2 95 74.7
EL10Ac7g16757 Beta vulgaris HOM05D006242 ORTHO05D007936 1.4e-34 149.4 95 74.7
Cpa.g.sc30.139 Carica papaya HOM05D006242 ORTHO05D007936 1.8e-34 149.1 95 76.8
MBI02_g26996_MAGBIO Magnolia biondii HOM05D006242 ORTHO05D007936 1.8e-34 149.1 92 76.1
arahy.Tifrunner.gnm1.ann1.PA3R73 Arachis hypogaea HOM05D006242 ORTHO05D007936 2.3e-34 148.7 95 72.6
PGR004G2427 Punica granatum HOM05D006242 ORTHO05D007936 2.3e-34 148.7 94 76.6
Hund15670 Selenicereus undatus HOM05D006242 ORTHO05D007936 3.0e-34 148.3 95 74.7
Eucgr.B01565 Eucalyptus grandis HOM05D006242 ORTHO05D007936 3.9e-34 147.9 95 75.8
MSTRG.20044 Avicennia marina HOM05D006242 ORTHO05D007936 6.7e-34 147.1 95 74.7
Lalb_Chr19g0129141 Lupinus albus HOM05D006242 ORTHO05D007936 6.7e-34 147.1 95 73.7
SGA_v2.0_scaffold4G02502 Striga asiatica HOM05D006242 ORTHO05D007936 6.7e-34 147.1 96 76.0
SGA_v2.0_scaffold51G18672 Striga asiatica HOM05D006242 ORTHO05D007936 6.7e-34 147.1 96 76.0
SalBow7G3063 Salvia bowleyana HOM05D006242 ORTHO05D007936 1.1e-33 146.4 95 72.6
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 2.6e-33 145.2 95 74.7
HPP92_011011 Vanilla planifolia HOM05D006242 ORTHO05D007936 2.6e-33 145.2 94 75.5
Sed0024740 Sechium edule HOM05D006242 ORTHO05D007936 7.4e-33 143.7 92 75.0
HanXRQChr12g0381511 Helianthus annuus HOM05D006242 ORTHO05D007936 9.7e-33 143.3 95 72.6
Medtr1g050428 Medicago truncatula HOM05D006242 ORTHO05D007936 1.3e-32 142.9 90 74.4
Ca_19722_v3 Cicer arietinum L. HOM05D006242 ORTHO05D007936 1.7e-32 142.5 90 73.3
ClCG01G025640 Citrullus lanatus HOM05D006242 ORTHO05D007936 1.7e-32 142.5 92 77.2
CDE05G0364 Ceratophyllum demersum HOM05D006242 ORTHO05D007936 3.7e-32 141.4 95 69.5
Psat6g094920 Pisum sativum HOM05D006242 ORTHO05D007936 6.3e-32 140.6 90 72.2
Migut.K01175 Erythranthe guttata HOM05D006242 ORTHO05D007936 1.8e-31 139.0 96 69.8
Zm00001eb233240 Zea mays HOM05D006242 ORTHO05D007936 1.8e-31 139.0 92 68.5
CsaV3_6G052870 Cucumis sativus L. HOM05D006242 ORTHO05D007936 2.4e-31 138.7 92 73.9
ECA232G2813 Erigeron canadensis HOM05D006242 ORTHO05D007936 9.1e-31 136.7 92 71.7
AUR62037908 Chenopodium quinoa HOM05D006242 ORTHO05D007936 3.5e-30 134.8 90 70.0
Glyma.02G163900 Glycine max HOM05D006242 ORTHO05D007936 5.0e-29 131.0 80 76.2
SEGI_06259 Sequoiadendron giganteum HOM05D006242 ORTHO05D007936 5.0e-29 131.0 93 67.7
AT2G35035 Arabidopsis thaliana HOM05D006242 ORTHO05D007936 1.9e-28 129.0 80 75.0
Cc09_g05610 Coffea canephora HOM05D006242 ORTHO05D007936 7.2e-28 127.1 76 80.3
THA.LOC104798560 Tarenaya hassleriana HOM05D006242 ORTHO05D007936 2.1e-27 125.6 160 47.5
Cc09_g05660 Coffea canephora HOM05D006242 ORTHO05D007936 1.4e-26 122.9 95 67.4
MELO3C007020.2 Cucumis melo HOM05D006242 ORTHO05D007936 6.7e-26 120.6 127 53.5
ATR1094G019 Amborella trichopoda HOM05D006242 ORTHO05D007936 2.6e-25 118.6 81 64.2
TPR.G22035 Trifolium pratense HOM05D006242 ORTHO05D007936 2.2e-24 115.5 76 69.7
Pp3c12_18460 Physcomitrium patens HOM05D006242 ORTHO05D007936 6.3e-24 114.0 93 57.0
SMO203G0088 Selaginella moellendorffii HOM05D006242 ORTHO05D007936 6.3e-24 114.0 93 58.1
COL.COLO4_17635 Corchorus olitorius HOM05D006242 ORTHO05D007936 1.1e-23 113.2 67 83.6
AUR62040160 Chenopodium quinoa HOM05D006242 ORTHO05D007936 1.8e-23 112.5 95 62.1
Lj1A1147G28 Lonicera japonica HOM05D006242 ORTHO05D007936 9.1e-23 110.2 63 87.3
BcaC02g11584 Brassica carinata HOM05D006242 ORTHO05D007936 1.2e-22 109.8 95 62.1
Nitab4.5_0000138g0120 Nicotiana tabacum HOM05D006242 ORTHO05D007936 1.6e-22 109.4 95 62.1
Cc09_g05720 Coffea canephora HOM05D006242 ORTHO05D007936 2.0e-22 109.0 67 77.6
Cc09_g05640 Coffea canephora HOM05D006242 ORTHO05D007936 1.0e-21 106.7 68 70.6
AagrBONN_evm.TU.Sc2ySwM_228.1028 Anthoceros agrestis HOM05D006242 ORTHO05D007936 2.2e-21 105.5 92 53.3
arahy.Tifrunner.gnm1.ann1.VZGM4G Arachis hypogaea HOM05D006242 ORTHO05D007936 3.8e-21 104.8 95 55.8
Cc09_g05680 Coffea canephora HOM05D006242 ORTHO05D007936 1.6e-19 99.4 65 67.7
Peaxi162Scf00198g01026 Petunia axillaris HOM05D006242 ORTHO05D007936 1.6e-19 99.4 93 58.1
TPR.G10622 Trifolium pratense HOM05D006242 ORTHO05D007936 2.6e-17 92.0 90 53.3
VMungo0720G1734 Vigna mungo HOM05D006242 ORTHO05D007936 2.6e-17 92.0 105 49.5
CBR_g46754 Chara braunii HOM05D006242 ORTHO05D007936 2.2e-16 89.0 85 51.8
Mapoly0026s0041 Marchantia polymorpha HOM05D006242 ORTHO05D007936 1.1e-15 86.7 92 47.8
SHI14613 Sapria himalayana HOM05D000105 ORTHO05D000023 2.4e-15 85.5 55 72.7
MCO04G402 Micromonas commoda HOM05D006242 ORTHO05D007936 2.0e-14 82.4 82 45.1
Os02g0173000 Oryza sativa ssp. japonica HOM05D006242 ORTHO05D007936 6.5e-13 77.4 53 64.2
CSS0025117 Camellia sinensis var. sinensis HOM05D006242 ORTHO05D007936 1.2e-11 73.2 40 92.5
unitig_37.g12020 Utricularia gibba HOM05D006242 ORTHO05D007936 9.8e-09 63.5 42 69.0
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 1.7e-08 62.8 84 39.3
HanXRQChr12g0369481 Helianthus annuus HOM05D006242 ORTHO05D007936 1.2e-06 56.6 43 65.1


User provided reference genes

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