Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01006123001 Vitis vinifera HOM05D006593 ORTHO05D008512 4.3e-68 261.2 129 100.0
GSVIVG01006735001 Vitis vinifera HOM05D006593 ORTHO05D008512 8.2e-67 256.9 129 98.4
Dinv01622 Davidia involucrata HOM05D006593 ORTHO05D008512 2.3e-45 185.7 130 72.3
CSS0021282 Camellia sinensis var. sinensis HOM05D006593 ORTHO05D008512 1.8e-42 176.0 132 68.2
Actinidia06518 Actinidia chinensis HOM05D006593 ORTHO05D008512 5.9e-41 171.0 132 65.2
MBI06_g07364_MAGBIO Magnolia biondii HOM05D006593 ORTHO05D008512 1.7e-40 169.5 131 66.4
Prupe.6G198700 Prunus persica HOM05D006593 ORTHO05D008512 1.7e-40 169.5 127 70.1
TWI53G0534 Tripterygium wilfordii HOM05D006593 ORTHO05D008512 2.2e-40 169.1 130 65.4
CANSAT01G0713 Cannabis sativa HOM05D006593 ORTHO05D008512 6.5e-40 167.5 130 65.4
FvH4_1g19740 Fragaria vesca HOM05D006593 ORTHO05D008512 8.5e-40 167.2 130 66.2
PGR031G1437 Punica granatum HOM05D006593 ORTHO05D008512 8.5e-40 167.2 127 63.8
Lsat_1_v5_gn_3_61401 Lactuca sativa HOM05D006593 ORTHO05D008512 1.1e-39 166.8 130 65.4
Lj2g0020402 Lotus japonicus HOM05D006593 ORTHO05D008512 1.1e-39 166.8 134 64.2
COL.COLO4_27348 Corchorus olitorius HOM05D006593 ORTHO05D008512 3.2e-39 165.2 130 65.4
FAN19G1905 Fragaria x ananassa HOM05D006593 ORTHO05D008512 3.2e-39 165.2 130 66.2
Ah.02g123650 Amaranthus hybridus HOM05D006593 ORTHO05D008512 4.2e-39 164.9 129 65.1
RcHm_v2.0_Chr2g0111321 Rosa chinensis HOM05D006593 ORTHO05D008512 4.2e-39 164.9 130 66.2
vmacro13002 Vaccinium macrocarpon HOM05D006593 ORTHO05D008512 4.2e-39 164.9 140 62.9
Ca_04534_v3 Cicer arietinum L. HOM05D006593 ORTHO05D008512 9.4e-39 163.7 132 63.6
MD15G1313700 Malus domestica HOM05D006593 ORTHO05D008512 1.2e-38 163.3 130 66.9
Rhsim10G0172300 Rhododendron simsii HOM05D006593 ORTHO05D008512 1.2e-38 163.3 135 61.5
TAR628G0061 Trochodendron aralioides HOM05D006593 ORTHO05D008512 1.2e-38 163.3 132 65.9
FAN26G1425 Fragaria x ananassa HOM05D006593 ORTHO05D008512 1.6e-38 162.9 130 63.1
Nn5g29896 Nelumbo nucifera HOM05D006593 ORTHO05D008512 1.6e-38 162.9 130 63.8
QL06p035616 Quercus lobata HOM05D006593 ORTHO05D008512 1.6e-38 162.9 127 69.3
Cfa006891 Carpinus fangiana HOM05D006593 ORTHO05D008512 2.1e-38 162.5 127 68.5
Aqoxy5G01304_Aqoxy5G01305 Aquilegia oxysepala HOM05D006593 ORTHO05D008512 2.7e-38 162.2 128 63.3
SalBow5G0109 Salvia bowleyana HOM05D006593 ORTHO05D008512 3.6e-38 161.8 128 62.5
FAN28G2735 Fragaria x ananassa HOM05D006593 ORTHO05D008512 6.1e-38 161.0 130 63.1
CiPaw.07G048200 Carya illinoinensis HOM05D006593 ORTHO05D008512 8.0e-38 160.6 130 66.9
Lalb_Chr05g0216291 Lupinus albus HOM05D006593 ORTHO05D008512 2.3e-37 159.1 132 61.4
Oeu012466.1 Olea europaea HOM05D006593 ORTHO05D008512 2.3e-37 159.1 128 62.5
Phvul.002G147900 Phaseolus vulgaris HOM05D006593 ORTHO05D008512 2.3e-37 159.1 131 61.8
HanXRQChr17g0550591 Helianthus annuus HOM05D006593 ORTHO05D008512 3.0e-37 158.7 129 64.3
Manes.13G098700 Manihot esculenta HOM05D006593 ORTHO05D008512 3.0e-37 158.7 132 67.4
VMungo1215G1341 Vigna mungo HOM05D006593 ORTHO05D008512 3.0e-37 158.7 132 61.4
Haze_03860 Corylus avellana HOM05D006593 ORTHO05D008512 4.0e-37 158.3 127 67.7
ClCG01G018400 Citrullus lanatus HOM05D006593 ORTHO05D008512 5.2e-37 157.9 127 66.9
Cc07_g14190 Coffea canephora HOM05D006593 ORTHO05D008512 8.8e-37 157.1 129 65.1
Duzib147G0804 Durio zibethinus HOM05D006593 ORTHO05D008512 8.8e-37 157.1 130 62.3
Gorai.003G043400 Gossypium raimondii HOM05D006593 ORTHO05D008512 8.8e-37 157.1 130 62.3
Sopen11g005350 Solanum pennellii HOM05D006593 ORTHO05D008512 1.2e-36 156.8 128 64.8
Solyc11g010550.2 Solanum lycopersicum HOM05D006593 ORTHO05D008512 2.0e-36 156.0 128 64.8
AUR62003656 Chenopodium quinoa HOM05D006593 ORTHO05D008512 2.6e-36 155.6 130 59.2
Gohir.D03G042700 Gossypium hirsutum HOM05D006593 ORTHO05D008512 2.6e-36 155.6 130 61.5
Thecc.01G091500 Theobroma cacao HOM05D006593 ORTHO05D008512 2.6e-36 155.6 130 60.8
PGSC0003DMG400016138 Solanum tuberosum HOM05D006593 ORTHO05D008512 3.4e-36 155.2 128 64.1
SGA_v2.0_scaffold45G17238 Striga asiatica HOM05D006593 ORTHO05D008512 3.4e-36 155.2 128 60.9
CsaV3_6G045050 Cucumis sativus L. HOM05D006593 ORTHO05D008512 4.4e-36 154.8 127 64.6
MELO3C007718.2 Cucumis melo HOM05D006593 ORTHO05D008512 5.7e-36 154.5 127 64.6
Gohir.A02G131300 Gossypium hirsutum HOM05D006593 ORTHO05D008512 7.5e-36 154.1 130 61.5
arahy.Tifrunner.gnm1.ann1.67PG0W Arachis hypogaea HOM05D006593 ORTHO05D008512 9.8e-36 153.7 132 60.6
arahy.Tifrunner.gnm1.ann1.ZAKH7Z Arachis hypogaea HOM05D006593 ORTHO05D008512 9.8e-36 153.7 132 60.6
Sed0000560 Sechium edule HOM05D006593 ORTHO05D008512 9.8e-36 153.7 127 65.4
Potri.007G010600 Populus trichocarpa HOM05D006593 ORTHO05D008512 1.3e-35 153.3 125 66.4
ATR0665G270 Amborella trichopoda HOM05D006593 ORTHO05D008512 2.2e-35 152.5 129 60.5
Eucgr.I00480 Eucalyptus grandis HOM05D006593 ORTHO05D008512 2.2e-35 152.5 127 62.2
AT2G22530 Arabidopsis thaliana HOM05D006593 ORTHO05D008512 2.8e-35 152.1 128 60.2
Glyma.01G023700 Glycine max HOM05D006593 ORTHO05D008512 2.8e-35 152.1 132 60.6
Eucgr.I00482 Eucalyptus grandis HOM05D006593 ORTHO05D008512 3.7e-35 151.8 127 61.4
Psat2g085480 Pisum sativum HOM05D006593 ORTHO05D008512 6.3e-35 151.0 132 59.1
Medtr5g032210 Medicago truncatula HOM05D006593 ORTHO05D008512 1.8e-34 149.4 131 58.0
EL10Ac6g15212 Beta vulgaris HOM05D006593 ORTHO05D008512 3.1e-34 148.7 130 56.9
Nitab4.5_0004153g0020 Nicotiana tabacum HOM05D006593 ORTHO05D008512 5.4e-34 147.9 135 60.7
PSO170G1479 Papaver somniferum HOM05D006593 ORTHO05D008512 7.0e-34 147.5 129 60.5
PSO017G0451 Papaver somniferum HOM05D006593 ORTHO05D008512 1.2e-33 146.7 133 57.1
THA.LOC104824911 Tarenaya hassleriana HOM05D006593 ORTHO05D008512 2.7e-33 145.6 129 58.9
Thhalv10000032m.g Eutrema salsugineum HOM05D006593 ORTHO05D008512 3.5e-33 145.2 128 60.2
A09p57440 Brassica napus HOM05D006593 ORTHO05D008512 2.3e-32 142.5 133 57.9
BraA09t41136Z Brassica rapa HOM05D006593 ORTHO05D008512 2.3e-32 142.5 133 57.9
unitig_748.g8644 Utricularia gibba HOM05D006593 ORTHO05D008512 2.3e-32 142.5 134 55.2
ECA246G1560 Erigeron canadensis HOM05D006593 ORTHO05D004993 3.8e-32 141.7 116 62.1
Os02g0781600 Oryza sativa ssp. japonica HOM05D006593 ORTHO05D008512 8.6e-32 140.6 126 55.6
BcaC07g41050 Brassica carinata HOM05D006593 ORTHO05D008512 1.1e-31 140.2 133 57.1
C08p40530 Brassica napus HOM05D006593 ORTHO05D008512 1.1e-31 140.2 133 57.1
BcaB08g35096 Brassica carinata HOM05D006593 ORTHO05D008512 2.5e-31 139.0 126 57.9
Lju188A1G72 Lonicera japonica HOM05D006593 ORTHO05D008512 3.2e-31 138.7 126 57.9
BolC8t51623H Brassica oleracea HOM05D006593 ORTHO05D008512 4.2e-31 138.3 133 56.4
Zm00001eb257050 Zea mays HOM05D006593 ORTHO05D008512 1.2e-30 136.7 119 58.8
Carub.0004s0170 Capsella rubella HOM05D006593 ORTHO05D008512 4.7e-30 134.8 128 57.0
Cpa.g.sc55.33 Carica papaya HOM05D006593 ORTHO05D008512 1.8e-29 132.9 130 55.4
HPP92_005968 Vanilla planifolia HOM05D006593 ORTHO05D008512 2.8e-27 125.6 128 49.2
HPP92_005975 Vanilla planifolia HOM05D006593 ORTHO05D008512 2.8e-27 125.6 128 49.2
AUR62017964 Chenopodium quinoa HOM05D006593 ORTHO05D008512 1.1e-26 123.6 132 52.3
SEGI_03063 Sequoiadendron giganteum HOM05D006593 ORTHO05D008512 1.1e-26 123.6 129 51.9
Nitab4.5_0001468g0100 Nicotiana tabacum HOM05D006593 ORTHO05D008512 4.1e-26 121.7 128 54.7
AL4G12066 Arabidopsis lyrata HOM05D006593 ORTHO05D008512 7.0e-26 120.9 128 52.3
Sabra07G0008000 Salix brachista HOM05D006593 ORTHO05D008512 9.2e-26 120.6 145 53.1
Mapoly0005s0227 Marchantia polymorpha HOM05D006593 ORTHO05D008512 4.5e-25 118.2 123 48.0
Hund16537 Selenicereus undatus HOM05D006593 ORTHO05D008512 1.3e-24 116.7 91 64.8
Eucgr.I00548 Eucalyptus grandis HOM05D006593 ORTHO05D008512 1.7e-24 116.3 127 50.4
Sc16g0000540 Simmondsia chinensis HOM05D006593 ORTHO05D004993 3.6e-22 108.6 90 64.4
CAN.G1724.3 Capsicum annuum HOM05D006593 ORTHO05D008512 8.0e-22 107.5 117 54.7
Pp3c8_800 Physcomitrium patens HOM05D006593 ORTHO05D008512 8.9e-21 104.0 128 43.8
Peaxi162Scf00778g00014 Petunia axillaris HOM05D006593 ORTHO05D008512 4.9e-19 98.2 63 74.6
TPR.G29973 Trifolium pratense HOM05D006593 ORTHO05D008512 2.4e-18 95.9 53 83.0
DCAR_014189 Daucus carota HOM05D006593 ORTHO05D008512 3.6e-14 82.0 58 65.5
SGA_v2.0_scaffold238G43950 Striga asiatica HOM05D006593 ORTHO05D008512 3.7e-11 72.0 116 40.5
TPR.G40431 Trifolium pratense HOM05D006593 ORTHO05D008512 1.9e-07 59.7 75 46.7


User provided reference genes

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