Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01006100001 Vitis vinifera HOM05D004524 ORTHO05D005477 8.5e-54 213.4 106 100.0
GSVIVG01005092001 Vitis vinifera HOM05D004524 ORTHO05D005477 4.0e-27 124.8 64 96.9
Haze_15172 Corylus avellana HOM05D004524 ORTHO05D005477 9.8e-26 120.2 64 92.2
Cfa004228 Carpinus fangiana HOM05D004524 ORTHO05D005477 1.7e-25 119.4 64 92.2
ECA246G4564 Erigeron canadensis HOM05D004524 ORTHO05D005477 8.3e-25 117.1 63 87.3
MD02G1159300 Malus domestica HOM05D004524 ORTHO05D005477 8.3e-25 117.1 64 89.1
Duzib187G1201 Durio zibethinus HOM05D004524 ORTHO05D005477 1.1e-24 116.7 63 88.9
Ciclev10024678m.g Citrus clementina HOM05D004524 ORTHO05D005477 1.4e-24 116.3 64 87.5
Nitab4.5_0000108g0200 Nicotiana tabacum HOM05D004524 ORTHO05D005477 1.4e-24 116.3 64 87.5
Prupe.7G144700 Prunus persica HOM05D004524 ORTHO05D005477 1.4e-24 116.3 64 89.1
CiPaw.01G027900 Carya illinoinensis HOM05D004524 ORTHO05D005477 1.9e-24 115.9 64 89.1
Gohir.A11G188400 Gossypium hirsutum HOM05D004524 ORTHO05D005477 1.9e-24 115.9 61 90.2
Gohir.D11G194900 Gossypium hirsutum HOM05D004524 ORTHO05D005477 1.9e-24 115.9 61 90.2
Atru.chr3.464 Acer truncatum HOM05D004524 ORTHO05D005477 2.4e-24 115.5 61 91.8
Cc07_g05430 Coffea canephora HOM05D004524 ORTHO05D005477 5.4e-24 114.4 65 83.1
Peaxi162Scf00535g00735 Petunia axillaris HOM05D004524 ORTHO05D005477 5.4e-24 114.4 61 88.5
QL06p044160 Quercus lobata HOM05D004524 ORTHO05D005477 5.4e-24 114.4 64 89.1
TAR628G0958 Trochodendron aralioides HOM05D004524 ORTHO05D005477 7.0e-24 114.0 65 84.6
CAN.G836.23 Capsicum annuum HOM05D004524 ORTHO05D005477 9.2e-24 113.6 64 85.9
RcHm_v2.0_Chr2g0103341 Rosa chinensis HOM05D004524 ORTHO05D005477 9.2e-24 113.6 64 85.9
Gorai.007G208400 Gossypium raimondii HOM05D004524 ORTHO05D005477 1.6e-23 112.8 61 88.5
HanXRQChr12g0378491 Helianthus annuus HOM05D004524 ORTHO05D005477 1.6e-23 112.8 63 82.5
FvH4_1g14580 Fragaria vesca HOM05D004524 ORTHO05D005477 2.0e-23 112.5 64 85.9
FAN28G0821 Fragaria x ananassa HOM05D004524 ORTHO05D005477 2.0e-23 112.5 64 85.9
FAN19G0876 Fragaria x ananassa HOM05D004524 ORTHO05D005477 3.5e-23 111.7 61 88.5
FAN23G1697 Fragaria x ananassa HOM05D004524 ORTHO05D005477 3.5e-23 111.7 61 88.5
FAN26G3430 Fragaria x ananassa HOM05D004524 ORTHO05D005477 3.5e-23 111.7 61 88.5
Actinidia30986 Actinidia chinensis HOM05D004524 ORTHO05D005477 6.0e-23 110.9 64 82.8
Glyma.16G144200 Glycine max HOM05D004524 ORTHO05D005477 7.8e-23 110.5 61 85.2
Thecc.01G046200 Theobroma cacao HOM05D004524 ORTHO05D005477 1.0e-22 110.2 64 82.8
MSTRG.23802 Avicennia marina HOM05D004524 ORTHO05D005477 1.3e-22 109.8 61 88.5
EL10Ac6g14835 Beta vulgaris HOM05D004524 ORTHO05D005477 1.3e-22 109.8 66 81.8
Migut.H00497 Erythranthe guttata HOM05D004524 ORTHO05D005477 1.3e-22 109.8 61 88.5
Rhsim08G0108900 Rhododendron simsii HOM05D004524 ORTHO05D005477 1.7e-22 109.4 60 88.3
Solyc02g090130.4 Solanum lycopersicum HOM05D004524 ORTHO05D005477 1.7e-22 109.4 64 82.8
Sopen02g034830 Solanum pennellii HOM05D004524 ORTHO05D005477 1.7e-22 109.4 64 82.8
CANSAT01G1357 Cannabis sativa HOM05D004524 ORTHO05D005477 2.3e-22 109.0 61 86.9
AUR62003242 Chenopodium quinoa HOM05D004524 ORTHO05D005477 2.3e-22 109.0 64 81.2
Hund14111 Selenicereus undatus HOM05D004524 ORTHO05D005477 2.3e-22 109.0 64 82.8
vmacro17888 Vaccinium macrocarpon HOM05D004524 ORTHO05D005477 2.3e-22 109.0 64 81.2
Aqoxy5G01755 Aquilegia oxysepala HOM05D004524 ORTHO05D005477 3.0e-22 108.6 61 85.2
arahy.Tifrunner.gnm1.ann1.7NUW0V Arachis hypogaea HOM05D004524 ORTHO05D005477 3.0e-22 108.6 62 82.3
arahy.Tifrunner.gnm1.ann1.S59764 Arachis hypogaea HOM05D004524 ORTHO05D005477 3.0e-22 108.6 62 82.3
Lalb_Chr05g0226951 Lupinus albus HOM05D004524 ORTHO05D005477 3.0e-22 108.6 64 79.7
VMungo0251G2856 Vigna mungo HOM05D004524 ORTHO05D005477 3.0e-22 108.6 64 79.7
AUR62027230 Chenopodium quinoa HOM05D004524 ORTHO05D005477 3.9e-22 108.2 64 81.2
Eucgr.H01945 Eucalyptus grandis HOM05D004524 ORTHO05D005477 3.9e-22 108.2 61 83.6
Sc16g0001530 Simmondsia chinensis HOM05D004524 ORTHO05D005477 6.6e-22 107.5 61 86.9
SGA_v2.0_scaffold15G07211 Striga asiatica HOM05D004524 ORTHO05D005477 8.6e-22 107.1 61 83.6
Lj4g0019712 Lotus japonicus HOM05D004524 ORTHO05D005477 1.1e-21 106.7 61 82.0
MBI16_g31332_MAGBIO Magnolia biondii HOM05D004524 ORTHO05D005477 1.1e-21 106.7 64 76.6
Phvul.003G249100 Phaseolus vulgaris HOM05D004524 ORTHO05D005477 1.1e-21 106.7 64 76.6
SalBow1G7798 Salvia bowleyana HOM05D004524 ORTHO05D005477 1.1e-21 106.7 61 80.3
Ah.02g126100 Amaranthus hybridus HOM05D004524 ORTHO05D005477 1.5e-21 106.3 64 78.1
PGR102G0585 Punica granatum HOM05D004524 ORTHO05D005477 2.5e-21 105.5 63 82.5
Lsat_1_v5_gn_3_94181 Lactuca sativa HOM05D004524 ORTHO05D005477 3.3e-21 105.1 63 79.4
Ca_22222_v3 Cicer arietinum L. HOM05D004524 ORTHO05D005477 4.3e-21 104.8 61 77.0
Manes.13G131650 Manihot esculenta HOM05D004524 ORTHO05D005477 4.3e-21 104.8 64 82.8
Sed0025355 Sechium edule HOM05D004524 ORTHO05D005477 9.5e-21 103.6 61 82.0
CDE01G0297 Ceratophyllum demersum HOM05D004524 ORTHO05D005477 1.2e-20 103.2 64 78.1
Medtr8g078970 Medicago truncatula HOM05D004524 ORTHO05D005477 1.2e-20 103.2 64 73.4
ATR0733G201 Amborella trichopoda HOM05D004524 ORTHO05D005477 1.6e-20 102.8 64 75.0
Nn5g29420 Nelumbo nucifera HOM05D004524 ORTHO05D005477 2.1e-20 102.4 64 78.1
unitig_62.g23407 Utricularia gibba HOM05D004524 ORTHO05D005477 2.1e-20 102.4 61 82.0
Psat0s4220g0040 Pisum sativum HOM05D004524 ORTHO05D005477 3.6e-20 101.7 64 71.9
TPR.G11249 Trifolium pratense HOM05D004524 ORTHO05D005477 3.6e-20 101.7 64 73.4
Sabra07G0030300 Salix brachista HOM05D004524 ORTHO05D005477 6.2e-20 100.9 60 80.0
BcaB05g23215 Brassica carinata HOM05D004524 ORTHO05D005477 1.1e-19 100.1 64 73.4
HPP92_018815 Vanilla planifolia HOM05D004524 ORTHO05D005477 1.1e-19 100.1 68 72.1
BcaC09g50025 Brassica carinata HOM05D004524 ORTHO05D005477 1.4e-19 99.8 64 73.4
A01p24160 Brassica napus HOM05D004524 ORTHO05D005477 1.4e-19 99.8 64 73.4
C01p29870 Brassica napus HOM05D004524 ORTHO05D005477 1.4e-19 99.8 64 73.4
BolC1t02927H Brassica oleracea HOM05D004524 ORTHO05D005477 1.4e-19 99.8 64 73.4
BraA01t02328Z Brassica rapa HOM05D004524 ORTHO05D005477 1.4e-19 99.8 64 73.4
Potri.007G034900 Populus trichocarpa HOM05D004524 ORTHO05D005477 1.4e-19 99.8 60 76.7
THA.LOC104827123 Tarenaya hassleriana HOM05D004524 ORTHO05D005477 1.4e-19 99.8 64 75.0
AL5G30510 Arabidopsis lyrata HOM05D004524 ORTHO05D005477 3.1e-19 98.6 64 73.4
AT3G50380 Arabidopsis thaliana HOM05D004524 ORTHO05D005477 3.1e-19 98.6 64 73.4
Carub.0005s1670 Capsella rubella HOM05D004524 ORTHO05D005477 3.1e-19 98.6 64 73.4
CARHR159880 Cardamine hirsuta HOM05D004524 ORTHO05D005477 3.1e-19 98.6 64 73.4
Aa31LG4G18620 Aethionema arabicum HOM05D004524 ORTHO05D005477 4.0e-19 98.2 64 70.3
TWI53G1766 Tripterygium wilfordii HOM05D004524 ORTHO05D005477 5.2e-19 97.8 61 77.0
PSO170G3447 Papaver somniferum HOM05D004524 ORTHO05D005477 6.8e-19 97.4 61 72.1
PSO700G0043 Papaver somniferum HOM05D004524 ORTHO05D005477 6.8e-19 97.4 61 72.1
Thhalv10027614m.g Eutrema salsugineum HOM05D004524 ORTHO05D005477 1.2e-18 96.7 64 71.9
MELO3C007516.2 Cucumis melo HOM05D004524 ORTHO05D005477 2.0e-18 95.9 61 78.7
Migut.H00499 Erythranthe guttata HOM05D004524 ORTHO05D005477 7.5e-18 94.0 48 93.8
ClCG01G016450 Citrullus lanatus HOM05D004524 ORTHO05D005477 2.2e-17 92.4 61 75.4
CsaV3_6G042750 Cucumis sativus L. HOM05D004524 ORTHO05D005477 2.9e-17 92.0 61 75.4
Zm00001eb030660 Zea mays HOM05D004524 ORTHO05D005477 3.7e-17 91.7 64 70.3
Zm00001eb383180 Zea mays HOM05D004524 ORTHO05D005477 4.9e-17 91.3 64 68.8
Zm00001eb381690 Zea mays HOM05D004524 ORTHO05D005477 8.3e-17 90.5 64 68.8
Zm00001eb381740 Zea mays HOM05D004524 ORTHO05D005477 8.3e-17 90.5 63 69.8
AagrBONN_evm.TU.Sc2ySwM_344.2829 Anthoceros agrestis HOM05D004524 ORTHO05D005477 8.6e-14 80.5 64 60.9
Pp3c8_13080 Physcomitrium patens HOM05D004524 ORTHO05D005477 7.3e-13 77.4 64 59.4
CBR_g51675 Chara braunii HOM05D004524 ORTHO05D005477 1.2e-12 76.6 62 53.2
Mapoly0053s0053 Marchantia polymorpha HOM05D004524 ORTHO05D005477 3.6e-12 75.1 64 53.1
Glyma.02G061902 Glycine max HOM05D004524 ORTHO05D005477 4.7e-12 74.7 54 68.5
SEGI_08749 Sequoiadendron giganteum HOM05D004524 ORTHO05D005477 5.8e-10 67.8 61 62.3
Dinv26770 Davidia involucrata HOM05D004524 ORTHO05D005477 9.9e-10 67.0 34 88.2


User provided reference genes

Program Settings