Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 9.5e-125 450.3 243 100.0
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 9.0e-91 337.4 243 74.9
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 1.2e-90 337.0 244 76.2
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 2.0e-90 336.3 239 74.9
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 2.0e-90 336.3 238 74.4
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 3.4e-90 335.5 243 73.7
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 4.5e-90 335.1 243 74.1
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 2.2e-89 332.8 241 75.1
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 8.4e-89 330.9 236 75.4
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 1.9e-88 329.7 243 74.9
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 2.4e-88 329.3 245 74.3
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 7.1e-88 327.8 243 73.3
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 1.6e-87 326.6 245 73.9
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 1.6e-87 326.6 242 72.7
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.6e-87 326.6 244 72.5
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 2.1e-87 326.2 244 73.8
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 2.3e-86 322.8 244 72.5
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 2.3e-86 322.8 244 72.5
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 3.0e-86 322.4 243 72.0
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 4.3e-85 318.5 244 73.0
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 7.4e-85 317.8 244 71.7
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 7.4e-85 317.8 244 71.7
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 2.1e-84 316.2 245 71.4
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 2.1e-84 316.2 243 72.8
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 2.8e-84 315.8 243 70.0
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 2.8e-84 315.8 242 69.0
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 4.8e-84 315.1 225 75.6
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 4.8e-84 315.1 243 68.7
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 6.2e-84 314.7 243 71.2
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 1.4e-83 313.5 246 72.4
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.4e-83 313.5 253 70.0
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 1.8e-83 313.2 225 73.3
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 1.8e-83 313.2 246 70.7
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 1.8e-83 313.2 235 73.2
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 2.4e-83 312.8 239 73.2
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 2.0e-82 309.7 244 71.3
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 5.8e-82 308.1 240 69.6
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 3.8e-81 305.4 245 68.6
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 3.8e-81 305.4 227 69.6
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 6.4e-81 304.7 245 68.6
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 3.2e-80 302.4 219 71.7
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 4.2e-80 302.0 252 66.7
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 2.7e-79 299.3 217 71.4
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 2.7e-79 299.3 245 67.3
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 4.6e-79 298.5 208 75.5
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 4.6e-79 298.5 208 76.4
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 6.0e-79 298.1 243 65.4
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 1.0e-78 297.4 222 73.4
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 1.8e-78 296.6 243 64.2
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 3.0e-78 295.8 245 66.5
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 6.7e-78 294.7 237 67.5
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 8.7e-78 294.3 243 65.4
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 8.7e-78 294.3 216 74.1
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 1.5e-77 293.5 245 69.0
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 1.9e-77 293.1 241 67.2
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 1.9e-77 293.1 228 68.4
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 4.3e-77 292.0 216 74.1
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 4.3e-77 292.0 228 67.5
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 1.3e-76 290.4 238 66.0
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 1.3e-76 290.4 219 68.0
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 2.1e-76 289.7 243 65.0
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 3.7e-76 288.9 210 71.9
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 4.8e-76 288.5 244 63.5
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 6.2e-76 288.1 238 66.4
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 8.2e-76 287.7 241 66.8
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 1.1e-75 287.3 204 76.0
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 1.8e-75 286.6 239 65.7
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 1.8e-75 286.6 241 66.4
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 2.4e-75 286.2 227 66.5
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 2.4e-75 286.2 243 64.6
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 4.0e-75 285.4 248 63.3
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 5.3e-75 285.0 241 64.3
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 6.9e-75 284.6 244 66.0
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 1.5e-74 283.5 238 65.1
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 1.5e-74 283.5 245 63.7
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 2.0e-74 283.1 222 69.4
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 2.6e-74 282.7 238 65.1
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 3.4e-74 282.3 238 65.1
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 3.4e-74 282.3 248 62.5
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 4.5e-74 282.0 238 65.1
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 4.5e-74 282.0 238 65.1
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 1.3e-73 280.4 224 64.3
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 1.7e-73 280.0 215 69.3
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 2.2e-73 279.6 238 64.7
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 8.4e-73 277.7 238 66.4
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 3.2e-72 275.8 236 63.1
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 4.6e-71 271.9 218 63.8
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 1.3e-70 270.4 237 62.4
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 5.1e-70 268.5 242 61.2
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.5e-69 266.9 233 64.8
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 3.3e-69 265.8 253 60.9
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 1.6e-68 263.5 191 73.3
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 1.1e-67 260.8 244 59.4
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 5.0e-65 251.9 226 61.1
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 1.4e-59 233.8 243 58.0
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 3.4e-58 229.2 212 59.0
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 1.0e-57 227.6 223 54.3
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 2.2e-57 226.5 174 69.5
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 1.0e-54 217.6 206 55.8
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 1.5e-48 197.2 227 48.9
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 4.5e-42 175.6 163 63.2
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 5.5e-40 168.7 157 65.6
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 1.5e-37 160.6 117 69.2
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 2.0e-37 160.2 244 44.7
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.5e-32 144.1 99 80.8
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 4.4e-29 132.5 216 42.1
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 9.8e-29 131.3 120 61.7
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 2.3e-25 120.2 79 83.5
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 2.0e-18 97.1 207 34.8
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 1.8e-14 84.0 210 30.5
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 1.6e-10 70.9 52 71.2
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 4.6e-10 69.3 66 60.6
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 4.3e-08 62.8 54 64.8


User provided reference genes

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