Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 0.0e+00 1179.5 697 100.0
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 2.9e-203 712.6 704 60.8
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 1.1e-202 710.7 659 63.1
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 3.4e-183 646.0 699 59.4
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 5.1e-179 632.1 626 58.1
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 2.7e-172 609.8 578 61.1
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 1.5e-170 604.0 598 57.0
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 2.4e-168 596.7 568 61.6
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 4.0e-168 595.9 574 57.5
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 4.0e-168 595.9 575 59.5
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 6.9e-168 595.1 574 57.3
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 6.9e-168 595.1 682 56.3
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 1.2e-167 594.3 573 59.0
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 2.0e-167 593.6 574 57.1
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 1.5e-162 577.4 566 58.8
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 6.2e-161 572.0 571 57.1
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 1.1e-160 571.2 562 59.3
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 1.2e-159 567.8 704 51.6
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 2.2e-158 563.5 570 56.3
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 4.3e-154 549.3 614 52.6
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 5.6e-154 548.9 571 57.6
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 2.1e-153 547.0 582 56.0
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 1.4e-152 544.3 558 57.7
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 5.3e-144 515.8 708 50.0
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 5.8e-143 512.3 693 49.9
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 2.9e-142 510.0 563 54.2
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 4.9e-142 509.2 554 55.4
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 4.2e-141 506.1 569 54.5
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 3.3e-138 496.5 568 54.9
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 9.7e-138 495.0 563 53.5
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 1.3e-137 494.6 702 47.7
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 3.7e-137 493.0 585 52.5
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 3.1e-136 490.0 682 47.5
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 1.9e-133 480.7 558 53.8
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 1.9e-130 470.7 562 52.5
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 2.5e-130 470.3 701 49.2
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 2.2e-129 467.2 574 51.7
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 4.8e-129 466.1 560 52.7
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 6.3e-129 465.7 558 52.7
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 6.3e-129 465.7 594 48.7
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 8.2e-129 465.3 690 50.0
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 1.4e-128 464.5 545 52.3
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 3.1e-128 463.4 546 53.5
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 2.0e-127 460.7 547 51.2
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 3.4e-127 459.9 548 54.6
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 4.5e-127 459.5 563 51.0
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 8.5e-126 455.3 565 50.4
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 7.2e-125 452.2 699 50.4
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 1.0e-123 448.4 644 50.5
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 1.0e-123 448.4 579 48.9
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 1.4e-123 448.0 610 49.0
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 5.1e-123 446.0 563 51.2
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 2.8e-121 440.3 560 50.4
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 2.4e-120 437.2 694 48.3
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 4.1e-120 436.4 534 51.3
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 5.3e-120 436.0 695 49.4
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 6.9e-120 435.6 541 49.9
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 5.9e-119 432.6 697 45.5
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 2.9e-118 430.3 647 50.2
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 3.8e-118 429.9 708 49.0
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 1.0e-115 421.8 632 47.0
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 8.8e-115 418.7 585 49.2
TAR622G0079 Trochodendron aralioides HOM05D002002 ORTHO05D008797 5.7e-114 416.0 494 50.4
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 5.3e-112 409.5 583 48.4
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 1.0e-110 405.2 577 46.8
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 8.5e-110 402.1 374 61.2
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 5.5e-109 399.4 686 44.5
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 2.7e-108 397.1 567 46.9
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 2.7e-108 397.1 555 47.2
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 2.3e-107 394.0 556 47.1
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 4.0e-107 393.3 491 51.3
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 4.5e-103 379.8 558 47.3
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 1.8e-99 367.9 394 55.8
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 2.4e-96 357.5 505 46.7
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 7.7e-95 352.4 574 45.6
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 1.1e-93 348.6 376 55.9
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 2.1e-92 344.4 591 43.5
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 3.7e-89 333.6 373 53.9
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 5.4e-88 329.7 564 42.7
Aa31LG4G10340 Aethionema arabicum HOM05D002002 ORTHO05D008711 4.7e-76 290.0 561 40.3
SGA_v2.0_scaffold98G29360 Striga asiatica HOM05D002002 ORTHO05D008797 1.1e-72 278.9 460 44.1
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 5.4e-72 276.6 697 41.5
Lj6A812T43 Lonicera japonica HOM05D002002 ORTHO05D008797 5.4e-72 276.6 370 47.0
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 1.2e-68 265.4 585 38.5
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 2.1e-68 264.6 564 39.9
HPP92_005414 Vanilla planifolia HOM05D002002 ORTHO05D008797 2.6e-66 257.7 598 36.1
Sp5g25780 Schrenkiella parvula HOM05D002002 ORTHO05D008797 1.7e-65 255.0 592 37.2
CARHR063850 Cardamine hirsuta HOM05D002002 ORTHO05D008797 1.2e-63 248.8 550 38.9
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 7.8e-63 246.1 571 38.7
Os04g0661700 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D008797 9.5e-61 239.2 543 36.8
SEGI_37990 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 1.5e-58 231.9 581 36.5
TPR.G3029 Trifolium pratense HOM05D002002 ORTHO05D008797 3.5e-55 220.7 418 39.0
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 3.3e-53 214.2 586 35.2
unitig_26.g10348 Utricularia gibba HOM05D002002 ORTHO05D008797 3.2e-48 197.6 559 34.2
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 1.3e-44 185.7 598 32.9
AT1G70620 Arabidopsis thaliana HOM05D002002 ORTHO05D008797 1.2e-42 179.1 296 43.6
TPR.G3025 Trifolium pratense HOM05D002002 ORTHO05D008797 1.3e-41 175.6 269 44.2
BcaC03g15213 Brassica carinata HOM05D002002 ORTHO05D008797 1.9e-40 171.8 574 31.4
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 1.9e-40 171.8 574 31.4
Sed0026296 Sechium edule HOM05D002002 ORTHO05D008797 1.9e-40 171.8 578 37.2
A02p16740 Brassica napus HOM05D002002 ORTHO05D008797 9.3e-40 169.5 574 32.1
BolC2t08843H Brassica oleracea HOM05D002002 ORTHO05D008797 3.5e-39 167.5 586 31.9
Solyc05g013490.4 Solanum lycopersicum HOM05D002002 ORTHO05D008797 8.7e-38 162.9 261 41.0
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 1.1e-37 162.5 327 39.1
BcaB05g24599 Brassica carinata HOM05D002002 ORTHO05D008797 1.3e-33 149.1 577 29.5
TPR.G2569 Trifolium pratense HOM05D002002 ORTHO05D008797 6.9e-27 126.7 141 52.5
Zm00001eb067460 Zea mays HOM05D002002 ORTHO05D008797 2.7e-23 114.8 181 45.9
Pp3c22_14720 Physcomitrium patens HOM05D002002 ORTHO05D008797 3.5e-23 114.4 641 27.5
unitig_26.g10410 Utricularia gibba HOM05D002002 ORTHO05D008797 1.1e-19 102.8 198 42.9
TPR.G1066 Trifolium pratense HOM05D002002 ORTHO05D008797 4.5e-18 97.4 113 51.3
Mapoly0026s0020 Marchantia polymorpha HOM05D002002 ORTHO05D008797 1.3e-17 95.9 251 34.3
Lsat_1_v5_gn_0_41981 Lactuca sativa HOM05D002002 ORTHO05D008797 1.5e-13 82.4 186 34.4
TPR.G3084 Trifolium pratense HOM05D002002 ORTHO05D012248 3.2e-08 64.7 119 37.0


User provided reference genes

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