Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.1e-78 296.6 149 100.0
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.3e-52 209.9 126 86.5
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 2.3e-44 182.6 127 73.2
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 1.9e-43 179.5 126 73.0
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 4.3e-43 178.3 126 72.2
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 5.6e-43 177.9 126 72.2
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 7.3e-43 177.6 127 72.4
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 7.3e-43 177.6 127 72.4
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 2.1e-42 176.0 126 72.2
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 4.7e-42 174.9 123 74.0
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 8.1e-42 174.1 126 69.8
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 1.4e-41 173.3 131 68.7
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 4.0e-41 171.8 126 69.0
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 4.0e-41 171.8 123 69.9
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 6.8e-41 171.0 126 70.6
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 8.9e-41 170.6 126 65.9
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 1.5e-40 169.9 126 69.8
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 1.5e-40 169.9 126 67.5
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 2.6e-40 169.1 126 68.3
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 4.4e-40 168.3 126 67.5
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 4.4e-40 168.3 126 67.5
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 1.3e-39 166.8 126 65.1
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 1.3e-39 166.8 116 72.4
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 1.3e-39 166.8 126 68.3
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 2.2e-39 166.0 126 66.7
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 2.2e-39 166.0 126 66.7
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 2.2e-39 166.0 126 65.1
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 2.9e-39 165.6 126 65.9
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 4.9e-39 164.9 123 66.7
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 4.9e-39 164.9 123 66.7
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 4.9e-39 164.9 123 66.7
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 6.4e-39 164.5 118 72.9
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 6.4e-39 164.5 126 65.9
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 6.4e-39 164.5 126 66.7
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 6.4e-39 164.5 126 67.5
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 6.4e-39 164.5 126 67.5
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 8.3e-39 164.1 123 66.7
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 8.3e-39 164.1 126 67.5
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 1.1e-38 163.7 113 72.6
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 1.1e-38 163.7 126 67.5
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 1.9e-38 162.9 126 68.3
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 1.9e-38 162.9 126 66.7
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.4e-38 162.5 123 67.5
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 2.4e-38 162.5 126 66.7
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 4.1e-38 161.8 126 65.9
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 5.4e-38 161.4 126 64.3
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 5.4e-38 161.4 126 67.5
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 5.4e-38 161.4 114 72.8
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 7.1e-38 161.0 126 65.1
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 9.2e-38 160.6 126 64.3
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 9.2e-38 160.6 126 64.3
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 1.2e-37 160.2 126 65.9
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 1.2e-37 160.2 126 60.3
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 1.6e-37 159.8 126 64.3
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 1.6e-37 159.8 126 64.3
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.6e-37 159.8 115 70.4
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 1.6e-37 159.8 126 65.9
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 2.7e-37 159.1 131 61.8
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 3.5e-37 158.7 126 65.1
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 4.6e-37 158.3 113 69.9
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 6.0e-37 157.9 126 62.7
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 7.8e-37 157.5 124 63.7
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 1.3e-36 156.8 126 66.7
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 1.7e-36 156.4 126 62.7
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 2.3e-36 156.0 126 61.1
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 2.3e-36 156.0 126 65.1
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.0e-36 155.6 113 64.6
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.0e-36 155.6 113 64.6
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 3.0e-36 155.6 127 66.9
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 3.0e-36 155.6 126 64.3
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 3.9e-36 155.2 126 64.3
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.5e-35 153.3 113 69.0
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 1.5e-35 153.3 126 59.5
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 2.5e-35 152.5 126 62.7
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 5.6e-35 151.4 126 65.1
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 5.6e-35 151.4 126 63.5
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 5.6e-35 151.4 126 63.5
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 5.6e-35 151.4 123 61.8
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 7.3e-35 151.0 124 62.1
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 1.2e-34 150.2 126 61.1
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 1.6e-34 149.8 127 58.3
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 2.1e-34 149.4 126 61.1
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 2.8e-34 149.1 123 62.6
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 2.8e-34 149.1 126 61.9
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 4.7e-34 148.3 126 61.9
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 8.1e-34 147.5 126 61.1
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 1.1e-33 147.1 126 60.3
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 1.1e-33 147.1 126 60.3
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 1.4e-33 146.7 123 60.2
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 1.4e-33 146.7 126 60.3
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 1.8e-33 146.4 126 60.3
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 3.1e-33 145.6 126 60.3
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 3.1e-33 145.6 154 52.6
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 4.0e-33 145.2 126 60.3
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 1.5e-32 143.3 126 59.5
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 2.0e-32 142.9 131 59.5
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 3.4e-32 142.1 82 85.4
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 9.9e-32 140.6 126 58.7
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 3.8e-31 138.7 131 53.4
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 4.9e-31 138.3 123 56.9
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 6.4e-31 137.9 113 60.2
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 2.4e-30 136.0 127 56.7
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 7.1e-30 134.4 105 64.8
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 9.2e-30 134.0 105 64.8
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.5e-29 132.1 103 60.2
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.5e-27 125.9 134 50.0
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 1.6e-26 123.2 115 53.9
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 1.9e-22 109.8 102 58.8
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 1.2e-21 107.1 126 44.4
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.2e-21 107.1 113 53.1
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 2.3e-20 102.8 76 61.8
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 6.2e-18 94.7 126 40.5
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.9e-15 85.9 63 65.1
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 2.4e-14 82.8 130 39.2
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 3.2e-14 82.4 63 63.5
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 6.0e-13 78.2 63 61.9
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.8e-12 76.6 63 60.3


User provided reference genes

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