Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01005579001 Vitis vinifera HOM05D064100 ORTHO05D441086 1.1e-40 169.5 82 100.0
GSVIVG01005612001 Vitis vinifera HOM05D064100 ORTHO05D441245 1.1e-40 169.5 82 100.0
Ciclev10018793m.g Citrus clementina HOM05D000141 ORTHO05D001311 5.5e-08 60.8 48 64.6
vmacro12029 Vaccinium macrocarpon HOM05D000141 ORTHO05D001311 1.2e-07 59.7 48 64.6
arahy.Tifrunner.gnm1.ann1.36GBYI Arachis hypogaea HOM05D000141 ORTHO05D001311 1.6e-07 59.3 48 62.5
MD05G1213600 Malus domestica HOM05D000141 ORTHO05D001311 3.5e-07 58.2 48 62.5
MD10G1197400 Malus domestica HOM05D000141 ORTHO05D001311 3.5e-07 58.2 48 60.4
Phvul.005G054500 Phaseolus vulgaris HOM05D000141 ORTHO05D001311 3.5e-07 58.2 48 62.5
GSVIVG01020503001 Vitis vinifera HOM05D000141 ORTHO05D001311 3.5e-07 58.2 48 62.5
arahy.Tifrunner.gnm1.ann1.RXP99Y Arachis hypogaea HOM05D000141 ORTHO05D001311 4.6e-07 57.8 48 60.4
Cfa019444 Carpinus fangiana HOM05D000141 ORTHO05D001311 4.6e-07 57.8 48 62.5
FvH4_3g16110 Fragaria vesca HOM05D000141 ORTHO05D001311 4.6e-07 57.8 48 62.5
FAN11G1205 Fragaria x ananassa HOM05D000141 ORTHO05D001311 4.6e-07 57.8 48 62.5
FAN16G3344 Fragaria x ananassa HOM05D000141 ORTHO05D001311 4.6e-07 57.8 48 62.5
FAN21G3407 Fragaria x ananassa HOM05D000141 ORTHO05D001311 4.6e-07 57.8 48 62.5
Glyma.08G174300 Glycine max HOM05D000141 ORTHO05D001311 4.6e-07 57.8 48 60.4
Lj3g0018650 Lotus japonicus HOM05D000141 ORTHO05D001311 4.6e-07 57.8 48 60.4
Sabra16G0290400 Salix brachista HOM05D000141 ORTHO05D001311 4.6e-07 57.8 48 58.3
CiPaw.12G006000 Carya illinoinensis HOM05D000141 ORTHO05D001311 7.9e-07 57.0 48 60.4
COL.COLO4_07051 Corchorus olitorius HOM05D000141 ORTHO05D001311 7.9e-07 57.0 48 60.4
Glyma.15G252800 Glycine max HOM05D000141 ORTHO05D001311 7.9e-07 57.0 48 60.4
Sabra11G0126100 Salix brachista HOM05D000141 ORTHO05D001311 7.9e-07 57.0 48 60.4
DCAR_019643 Daucus carota HOM05D000141 ORTHO05D001311 1.0e-06 56.6 48 60.4
Nitab4.5_0000505g0070 Nicotiana tabacum HOM05D000141 ORTHO05D001311 1.0e-06 56.6 82 40.2
Potri.001G436200 Populus trichocarpa HOM05D000141 ORTHO05D001311 1.0e-06 56.6 48 58.3
CSS0044535 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001311 1.3e-06 56.2 48 60.4
Lalb_Chr20g0108861 Lupinus albus HOM05D000141 ORTHO05D001311 1.3e-06 56.2 48 58.3
Gohir.A01G036700 Gossypium hirsutum HOM05D000141 ORTHO05D001311 1.8e-06 55.8 48 58.3
Gohir.D01G024000 Gossypium hirsutum HOM05D000141 ORTHO05D001311 1.8e-06 55.8 48 58.3
Gorai.002G032500 Gossypium raimondii HOM05D000141 ORTHO05D001311 1.8e-06 55.8 48 58.3
Prupe.4G144400 Prunus persica HOM05D000141 ORTHO05D001311 1.8e-06 55.8 48 60.4
Thecc.07G157900 Theobroma cacao HOM05D000141 ORTHO05D001311 1.8e-06 55.8 48 58.3
Atru.chr13.980 Acer truncatum HOM05D000141 ORTHO05D001311 2.3e-06 55.5 49 55.1
VMungo1080G0426 Vigna mungo HOM05D000141 ORTHO05D001311 2.3e-06 55.5 48 58.3
Dinv42594 Davidia involucrata HOM05D000141 ORTHO05D001311 3.0e-06 55.1 49 57.1
Lj1C805T5 Lonicera japonica HOM05D000141 ORTHO05D001311 3.0e-06 55.1 48 58.3
EL10Ac4g08530 Beta vulgaris HOM05D000141 ORTHO05D001311 3.9e-06 54.7 48 60.4
CANSAT56G1181 Cannabis sativa HOM05D000141 ORTHO05D001311 3.9e-06 54.7 48 58.3
Lalb_Chr25g0285251 Lupinus albus HOM05D000141 ORTHO05D001311 3.9e-06 54.7 48 56.2
QL04p072968 Quercus lobata HOM05D000141 ORTHO05D001311 3.9e-06 54.7 48 56.2
Actinidia12332 Actinidia chinensis HOM05D000141 ORTHO05D001311 5.1e-06 54.3 53 54.7
ATR0767G147 Amborella trichopoda HOM05D000141 ORTHO05D001311 5.1e-06 54.3 49 57.1
RcHm_v2.0_Chr5g0027091 Rosa chinensis HOM05D000141 ORTHO05D001311 5.1e-06 54.3 48 58.3
Sabra16G0291500 Salix brachista HOM05D000141 ORTHO05D001311 5.1e-06 54.3 48 56.2
Duzib213G0002 Durio zibethinus HOM05D000141 ORTHO05D001311 6.7e-06 53.9 48 56.2
MBI16_g27901_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D001311 6.7e-06 53.9 49 57.1
PSO541G4774 Papaver somniferum HOM05D000141 ORTHO05D001311 6.7e-06 53.9 49 55.1
PSO675G0929 Papaver somniferum HOM05D000141 ORTHO05D001311 6.7e-06 53.9 49 55.1
Rhsim06G0183600 Rhododendron simsii HOM05D000141 ORTHO05D001311 6.7e-06 53.9 48 54.2
TAR625G0953 Trochodendron aralioides HOM05D000141 ORTHO05D001311 6.7e-06 53.9 49 55.1
CANSAT56G4238 Cannabis sativa HOM05D000141 ORTHO05D001311 8.7e-06 53.5 48 56.2
Cpa.g.sc229.5 Carica papaya HOM05D000141 ORTHO05D001311 8.7e-06 53.5 48 58.3
Manes.03G090900 Manihot esculenta HOM05D000141 ORTHO05D001311 8.7e-06 53.5 47 59.6


User provided reference genes

Program Settings