Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01005388001 Vitis vinifera HOM05D004723 ORTHO05D006176 9.5e-70 266.9 155 100.0
GSVIVG01007226001 Vitis vinifera HOM05D004723 ORTHO05D006176 2.9e-42 175.6 119 93.3
GSVIVG01005594001 Vitis vinifera HOM05D004723 ORTHO05D006176 7.1e-41 171.0 95 98.9
TWI09G0244 Tripterygium wilfordii HOM05D004723 ORTHO05D006176 2.5e-25 119.4 103 60.2
Gorai.012G044400 Gossypium raimondii HOM05D004723 ORTHO05D006176 3.2e-25 119.0 103 59.2
Lj4A224T28 Lonicera japonica HOM05D004723 ORTHO05D006176 5.5e-25 118.2 74 73.0
Gohir.D04G039432 Gossypium hirsutum HOM05D004723 ORTHO05D006176 7.1e-25 117.9 81 70.4
TAR628G1348 Trochodendron aralioides HOM05D004723 ORTHO05D006176 7.1e-25 117.9 76 75.0
Sed0008382 Sechium edule HOM05D004723 ORTHO05D006176 1.6e-24 116.7 101 59.4
Gohir.A05G376600 Gossypium hirsutum HOM05D004723 ORTHO05D006176 1.0e-23 114.0 99 59.6
QL06p051414 Quercus lobata HOM05D004723 ORTHO05D006176 1.0e-23 114.0 102 59.8
MD15G1238700 Malus domestica HOM05D004723 ORTHO05D006176 1.1e-22 110.5 70 75.7
Nn5g30820 Nelumbo nucifera HOM05D004723 ORTHO05D006176 1.1e-22 110.5 81 66.7
Prupe.7G173800 Prunus persica HOM05D004723 ORTHO05D006176 1.9e-22 109.8 70 72.9
PGR119G2074 Punica granatum HOM05D004723 ORTHO05D006176 1.9e-22 109.8 103 52.4
MD02G1124600 Malus domestica HOM05D004723 ORTHO05D006176 3.3e-22 109.0 70 74.3
Thecc.01G154900 Theobroma cacao HOM05D004723 ORTHO05D006176 4.3e-22 108.6 76 72.4
Manes.10G142700 Manihot esculenta HOM05D004723 ORTHO05D006176 5.7e-22 108.2 73 71.2
CANSAT25G3056 Cannabis sativa HOM05D004723 ORTHO05D006176 7.4e-22 107.8 71 70.4
Cc07_g11220 Coffea canephora HOM05D004723 ORTHO05D006176 1.6e-21 106.7 76 68.4
Hund14070 Selenicereus undatus HOM05D004723 ORTHO05D006176 1.6e-21 106.7 103 57.3
Potri.005G108800 Populus trichocarpa HOM05D004723 ORTHO05D006176 8.2e-21 104.4 78 57.7
Ciclev10025027m.g Citrus clementina HOM05D004723 ORTHO05D006176 1.1e-20 104.0 73 68.5
Eucgr.I02314 Eucalyptus grandis HOM05D004723 ORTHO05D006176 1.8e-20 103.2 64 73.4
CiPaw.07G062200 Carya illinoinensis HOM05D004723 ORTHO05D006176 5.3e-20 101.7 71 71.8
Atru.chr3.886 Acer truncatum HOM05D004723 ORTHO05D006176 9.0e-20 100.9 105 53.3
Atru.chr3.897 Acer truncatum HOM05D004723 ORTHO05D006176 9.0e-20 100.9 105 53.3
vmacro18436 Vaccinium macrocarpon HOM05D004723 ORTHO05D006176 9.0e-20 100.9 78 66.7
Rhsim08G0030800 Rhododendron simsii HOM05D004723 ORTHO05D006176 1.2e-19 100.5 77 64.9
Oeu005338.2 Olea europaea HOM05D004723 ORTHO05D006176 2.0e-19 99.8 74 66.2
Sabra05G0089200 Salix brachista HOM05D004723 ORTHO05D006176 1.7e-18 96.7 76 55.3
TPR.G29970 Trifolium pratense HOM05D004723 ORTHO05D006176 2.2e-18 96.3 78 57.7
Lalb_Chr16g0391491 Lupinus albus HOM05D004723 ORTHO05D006176 2.9e-18 95.9 76 60.5
Peaxi162Scf00198g00136 Petunia axillaris HOM05D004723 ORTHO05D006176 3.8e-18 95.5 77 57.1
Solyc02g083470.3 Solanum lycopersicum HOM05D004723 ORTHO05D006176 6.5e-18 94.7 70 60.0
PGSC0003DMG400003588 Solanum tuberosum HOM05D004723 ORTHO05D006176 6.5e-18 94.7 70 60.0
CDE05G0976 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 8.4e-18 94.4 69 65.2
Sopen02g028260 Solanum pennellii HOM05D004723 ORTHO05D006176 8.4e-18 94.4 83 54.2
Aqoxy6G02087 Aquilegia oxysepala HOM05D004723 ORTHO05D006176 1.1e-17 94.0 74 62.2
Psat7g090000 Pisum sativum HOM05D004723 ORTHO05D006176 1.1e-17 94.0 82 56.1
DCAR_024713 Daucus carota HOM05D004723 ORTHO05D006176 1.4e-17 93.6 74 62.2
Phvul.003G266400 Phaseolus vulgaris HOM05D004723 ORTHO05D006176 1.9e-17 93.2 105 43.8
SHI00027 Sapria himalayana HOM05D004723 ORTHO05D006176 1.9e-17 93.2 71 66.2
VMungo0251G3240 Vigna mungo HOM05D004723 ORTHO05D006176 1.9e-17 93.2 105 43.8
ECA232G2222 Erigeron canadensis HOM05D004723 ORTHO05D006176 2.5e-17 92.8 90 53.3
COL.COLO4_33622 Corchorus olitorius HOM05D004723 ORTHO05D006176 5.5e-17 91.7 79 57.0
Nitab4.5_0001789g0050 Nicotiana tabacum HOM05D004723 ORTHO05D006176 5.5e-17 91.7 74 60.8
Lsat_1_v5_gn_4_144101 Lactuca sativa HOM05D004723 ORTHO05D006176 7.1e-17 91.3 108 48.1
Medtr4g096820 Medicago truncatula HOM05D004723 ORTHO05D006176 1.2e-16 90.5 120 49.2
arahy.Tifrunner.gnm1.ann1.7VD04T Arachis hypogaea HOM05D004723 ORTHO05D006176 2.1e-16 89.7 73 61.6
arahy.Tifrunner.gnm1.ann1.DG5MW5 Arachis hypogaea HOM05D004723 ORTHO05D006176 2.1e-16 89.7 73 61.6
Nitab4.5_0006899g0060 Nicotiana tabacum HOM05D004723 ORTHO05D006176 2.1e-16 89.7 74 59.5
Sc07g0001170 Simmondsia chinensis HOM05D004723 ORTHO05D006176 3.5e-16 89.0 70 58.6
FvH4_1g11200 Fragaria vesca HOM05D004723 ORTHO05D006176 4.6e-16 88.6 80 55.0
FAN19G1371 Fragaria x ananassa HOM05D004723 ORTHO05D006176 6.1e-16 88.2 78 56.4
Glyma.02G045200 Glycine max HOM05D004723 ORTHO05D006176 1.0e-15 87.4 107 43.0
HanXRQChr09g0257321 Helianthus annuus HOM05D004723 ORTHO05D006176 1.3e-15 87.0 75 58.7
Glyma.16G122800 Glycine max HOM05D004723 ORTHO05D006176 5.1e-15 85.1 108 45.4
Aa31LG5G12460 Aethionema arabicum HOM05D004723 ORTHO05D006176 6.7e-15 84.7 76 51.3
Duzib147G1420 Durio zibethinus HOM05D004723 ORTHO05D006176 6.7e-15 84.7 75 53.3
Gohir.1Z049326 Gossypium hirsutum HOM05D004723 ORTHO05D006176 8.7e-15 84.3 80 55.0
Thecc.08G139800 Theobroma cacao HOM05D004723 ORTHO05D006176 3.3e-14 82.4 71 62.0
AL3G11100 Arabidopsis lyrata HOM05D004723 ORTHO05D006176 4.3e-14 82.0 103 41.7
CSS0012813 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 4.3e-14 82.0 104 45.2
CSS0036730 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 4.3e-14 82.0 104 45.2
Cfa007019 Carpinus fangiana HOM05D004723 ORTHO05D006176 4.3e-14 82.0 74 59.5
Lj4g0028127 Lotus japonicus HOM05D004723 ORTHO05D006176 5.7e-14 81.6 61 60.7
CARHR075890 Cardamine hirsuta HOM05D004723 ORTHO05D006176 7.4e-14 81.3 80 51.2
RcHm_v2.0_Chr2g0098611 Rosa chinensis HOM05D004723 ORTHO05D006176 1.3e-13 80.5 119 40.3
SMO232G0062 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 1.6e-13 80.1 80 48.8
Ca_18264_v3 Cicer arietinum L. HOM05D004723 ORTHO05D006176 2.2e-13 79.7 63 58.7
FAN26G3228 Fragaria x ananassa HOM05D004723 ORTHO05D006176 2.2e-13 79.7 78 52.6
PSO675G8954 Papaver somniferum HOM05D004723 ORTHO05D006176 2.2e-13 79.7 101 45.5
ClCG05G000690 Citrullus lanatus HOM05D004723 ORTHO05D006176 2.8e-13 79.3 101 45.5
Lsat_1_v5_gn_5_164041 Lactuca sativa HOM05D004723 ORTHO05D006176 2.8e-13 79.3 72 51.4
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 2.8e-13 79.3 94 46.8
EL10Ac6g15170 Beta vulgaris HOM05D004723 ORTHO05D006176 4.8e-13 78.6 81 55.6
Haze_03712 Corylus avellana HOM05D004723 ORTHO05D006176 4.8e-13 78.6 71 59.2
PSO541G1155 Papaver somniferum HOM05D004723 ORTHO05D006176 6.3e-13 78.2 101 44.6
SEGI_25425 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 6.3e-13 78.2 61 62.3
MSTRG.10980 Avicennia marina HOM05D004723 ORTHO05D006176 1.8e-12 76.6 95 43.2
AT3G01160 Arabidopsis thaliana HOM05D004723 ORTHO05D006176 4.1e-12 75.5 77 45.5
Sp3g00960 Schrenkiella parvula HOM05D004723 ORTHO05D006176 5.3e-12 75.1 102 43.1
Mapoly0061s0018 Marchantia polymorpha HOM05D004723 ORTHO05D006176 9.0e-12 74.3 72 51.4
Carub.0003s0100 Capsella rubella HOM05D004723 ORTHO05D006176 1.2e-11 73.9 77 45.5
Medtr4g073330 Medicago truncatula HOM05D004723 ORTHO05D006176 1.2e-11 73.9 83 44.6
BcaC05g30387 Brassica carinata HOM05D004723 ORTHO05D006176 2.6e-11 72.8 78 46.2
C09p75390 Brassica napus HOM05D004723 ORTHO05D006176 2.6e-11 72.8 78 46.2
BolC5t35121H Brassica oleracea HOM05D004723 ORTHO05D006176 2.6e-11 72.8 78 46.2
AagrBONN_evm.TU.Sc2ySwM_117.2822 Anthoceros agrestis HOM05D004723 ORTHO05D006176 1.0e-10 70.9 80 47.5
AagrBONN_evm.TU.Sc2ySwM_368.2747 Anthoceros agrestis HOM05D004723 ORTHO05D006176 1.0e-10 70.9 80 47.5
A05p44800 Brassica napus HOM05D004723 ORTHO05D006176 1.0e-10 70.9 80 45.0
BraA05t23177Z Brassica rapa HOM05D004723 ORTHO05D006176 1.0e-10 70.9 80 45.0
MELO3C006009.2 Cucumis melo HOM05D004723 ORTHO05D006176 1.3e-10 70.5 101 40.6
SMO239G0207 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 1.3e-10 70.5 71 49.3
BcaC05g30489 Brassica carinata HOM05D004723 ORTHO05D006176 6.5e-10 68.2 72 47.2
CsaV3_3G007910 Cucumis sativus L. HOM05D004723 ORTHO05D006176 1.4e-09 67.0 101 38.6
Actinidia35669 Actinidia chinensis HOM05D004723 ORTHO05D006176 1.6e-08 63.5 123 37.4
Thhalv10020182m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 3.6e-08 62.4 105 38.1
Cpa.g.sc6.304 Carica papaya HOM05D004723 ORTHO05D006176 1.4e-07 60.5 109 36.7
ATR0665G361 Amborella trichopoda HOM05D004723 ORTHO05D006176 5.7e-06 55.1 82 40.2
BcaC01g04506 Brassica carinata HOM05D004723 ORTHO05D006176 7.4e-06 54.7 78 41.0


User provided reference genes

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