Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 2.5e-164 582.0 294 100.0
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.7e-139 498.4 303 83.8
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 9.1e-138 493.8 291 84.5
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 4.2e-135 485.0 296 82.4
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 9.4e-135 483.8 290 83.8
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 2.7e-134 482.3 278 86.7
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 3.6e-134 481.9 291 82.8
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 1.0e-133 480.3 285 84.9
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 1.4e-133 479.9 295 82.0
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 1.1e-132 476.9 292 82.2
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 1.1e-132 476.9 290 82.8
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 1.1e-132 476.9 283 82.7
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 2.0e-132 476.1 281 84.0
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 2.0e-132 476.1 294 82.3
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 2.0e-132 476.1 283 84.1
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 2.6e-132 475.7 295 81.4
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 4.4e-132 474.9 290 82.4
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 4.4e-132 474.9 282 83.7
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 7.4e-132 474.2 277 84.1
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 9.7e-132 473.8 289 81.7
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.3e-131 473.4 295 80.3
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 1.7e-131 473.0 290 81.7
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 2.8e-131 472.2 290 81.4
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 2.8e-131 472.2 301 79.4
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 6.3e-131 471.1 287 81.2
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 1.4e-130 469.9 285 81.4
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 1.4e-130 469.9 285 81.4
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 1.4e-130 469.9 285 81.4
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 1.4e-130 469.9 288 80.6
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 1.4e-130 469.9 282 82.6
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 1.4e-130 469.9 283 82.7
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.8e-130 469.5 291 80.8
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 1.8e-130 469.5 290 80.7
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 2.4e-130 469.2 287 80.8
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 2.4e-130 469.2 285 81.8
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 2.4e-130 469.2 285 81.8
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 2.4e-130 469.2 279 83.9
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 3.1e-130 468.8 279 82.8
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 4.1e-130 468.4 281 83.3
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 5.3e-130 468.0 286 81.5
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 5.3e-130 468.0 289 81.0
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 7.0e-130 467.6 286 80.4
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 7.0e-130 467.6 279 84.6
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 7.0e-130 467.6 282 83.0
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 7.0e-130 467.6 281 82.9
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 7.0e-130 467.6 280 83.6
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 7.0e-130 467.6 289 81.3
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 9.1e-130 467.2 282 82.3
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 9.1e-130 467.2 281 82.2
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 9.1e-130 467.2 279 83.2
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 9.1e-130 467.2 282 82.6
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 1.2e-129 466.8 288 81.2
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.2e-129 466.8 282 83.0
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 1.2e-129 466.8 279 83.2
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 1.6e-129 466.5 291 79.4
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 1.6e-129 466.5 279 82.8
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 1.6e-129 466.5 283 83.0
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.6e-129 466.5 287 81.5
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 2.0e-129 466.1 280 83.6
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 2.0e-129 466.1 280 82.5
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 2.6e-129 465.7 282 83.7
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 4.5e-129 464.9 290 80.7
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 5.9e-129 464.5 289 80.6
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 1.0e-128 463.8 292 78.8
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 1.0e-128 463.8 291 80.8
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 1.0e-128 463.8 302 77.8
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 1.7e-128 463.0 281 83.6
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 2.2e-128 462.6 280 82.9
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 2.9e-128 462.2 278 82.7
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 2.9e-128 462.2 282 81.9
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 3.8e-128 461.8 287 79.8
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 3.8e-128 461.8 279 81.7
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 6.5e-128 461.1 284 81.0
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 6.5e-128 461.1 291 80.1
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 6.5e-128 461.1 279 81.7
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 6.5e-128 461.1 290 79.3
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 8.5e-128 460.7 290 80.0
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 8.5e-128 460.7 289 79.9
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.1e-127 460.3 282 80.9
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 1.1e-127 460.3 292 79.5
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 1.5e-127 459.9 270 85.2
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 1.5e-127 459.9 281 81.1
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 1.5e-127 459.9 284 80.3
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 3.2e-127 458.8 290 79.7
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 3.2e-127 458.8 287 79.1
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 3.2e-127 458.8 290 80.0
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 7.2e-127 457.6 291 79.0
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 7.2e-127 457.6 282 81.6
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 9.4e-127 457.2 256 86.7
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 1.2e-126 456.8 296 76.4
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 1.6e-126 456.4 273 82.1
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 2.7e-126 455.7 279 81.7
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 3.6e-126 455.3 278 81.7
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 3.6e-126 455.3 287 78.4
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 6.1e-126 454.5 287 80.5
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 8.0e-126 454.1 291 77.0
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 1.4e-125 453.4 298 77.9
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.4e-125 453.4 283 79.5
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 1.4e-125 453.4 283 80.6
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.8e-125 453.0 291 78.0
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 1.8e-125 453.0 290 79.3
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 5.2e-125 451.4 281 79.4
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 1.1e-124 450.3 281 79.7
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.1e-124 450.3 283 78.8
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 1.1e-124 450.3 281 79.4
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 1.5e-124 449.9 298 76.5
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 3.1e-122 442.2 285 76.5
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 4.1e-122 441.8 278 79.5
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 2.7e-121 439.1 290 77.2
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 3.5e-121 438.7 293 75.8
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 1.3e-120 436.8 293 74.1
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 2.9e-120 435.6 261 83.9
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 5.0e-120 434.9 295 72.9
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 3.6e-118 428.7 280 77.9
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 1.4e-117 426.8 282 78.4
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 2.3e-117 426.0 278 77.3
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 2.3e-117 426.0 311 72.0
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 4.0e-117 425.2 293 74.1
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 6.8e-117 424.5 308 71.4
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.5e-116 423.3 263 80.2
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 1.5e-116 423.3 273 78.4
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 2.7e-113 412.5 361 63.7
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 5.0e-112 408.3 221 88.7
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 1.5e-111 406.8 221 89.1
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 1.0e-109 400.6 254 78.0
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 6.8e-109 397.9 254 78.0
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 6.8e-109 397.9 278 69.1
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 1.2e-108 397.1 270 75.2
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 9.8e-108 394.0 218 88.1
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 9.8e-108 394.0 218 88.1
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 1.7e-107 393.3 250 75.2
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 1.4e-106 390.2 251 75.3
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 9.2e-106 387.5 200 94.5
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 1.3e-104 383.6 252 72.2
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 1.3e-99 367.1 252 70.2
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 4.3e-95 352.1 298 65.1
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 6.8e-93 344.7 215 80.9
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 1.9e-90 336.7 221 75.6
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 6.0e-89 331.6 182 88.5
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 5.0e-88 328.6 182 87.9
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 1.7e-83 313.5 206 76.7
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 4.3e-79 298.9 174 83.3
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 9.9e-76 287.7 221 71.9
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 9.9e-76 287.7 190 75.8
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 2.1e-70 270.0 152 85.5
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 9.3e-66 254.6 194 66.5
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 6.2e-62 241.9 146 81.5
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 1.7e-59 233.8 209 62.2
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 6.7e-48 195.3 158 65.8
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 1.1e-47 194.5 119 74.8
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 2.5e-47 193.4 136 74.3
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 7.4e-47 191.8 209 51.7
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 1.8e-40 170.6 105 75.2
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 8.7e-40 168.3 177 54.8
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 1.8e-37 160.6 86 88.4
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 8.5e-35 151.8 96 72.9
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.6e-33 146.4 105 71.4
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 2.5e-31 140.2 305 33.8
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 1.9e-26 124.0 170 44.7
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 1.6e-25 120.9 196 41.8
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 1.0e-24 118.2 66 87.9
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 1.0e-24 118.2 66 87.9
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 2.6e-20 103.6 78 70.5
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 5.2e-16 89.4 45 91.1
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 7.4e-15 85.5 158 38.6
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 1.7e-14 84.3 79 54.4
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-13 80.1 85 50.6
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 9.1e-13 78.6 92 51.1
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 5.0e-11 72.8 61 70.5
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 5.0e-11 72.8 61 70.5
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 1.1e-10 71.6 110 40.0
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 9.4e-10 68.6 103 41.7
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 6.1e-09 65.9 60 58.3
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 3.0e-08 63.5 57 56.1
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.0e-08 63.5 76 50.0
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 5.2e-08 62.8 42 73.8
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 1.2e-07 61.6 57 49.1
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 5.7e-07 59.3 37 78.4
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 2.2e-06 57.4 56 58.9
Lj2g0024488 Lotus japonicus HOM05D003815 ORTHO05D004580 4.8e-06 56.2 38 71.1
Solyc04g079010.1 Solanum lycopersicum HOM05D003815 ORTHO05D004580 4.8e-06 56.2 40 62.5
Actinidia37470 Actinidia chinensis HOM05D003815 ORTHO05D004218 6.3e-06 55.8 35 74.3


User provided reference genes

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