Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 8.0e-236 820.1 425 100.0
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 2.4e-147 526.2 499 56.1
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 2.6e-146 522.7 494 57.1
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 6.5e-145 518.1 467 57.6
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 3.6e-143 512.3 498 58.0
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.5e-141 506.9 475 56.6
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.4e-139 500.4 505 53.5
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 7.7e-138 494.6 498 53.8
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 3.2e-136 489.2 437 59.3
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 3.2e-136 489.2 494 53.8
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 4.2e-136 488.8 492 53.5
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 2.1e-135 486.5 490 53.3
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 3.6e-135 485.7 503 59.0
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 1.8e-134 483.4 490 52.9
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 3.0e-134 482.6 483 54.0
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 1.5e-133 480.3 451 55.7
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 3.3e-133 479.2 440 59.1
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 3.3e-133 479.2 440 59.1
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 7.4e-133 478.0 502 55.4
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.3e-132 477.2 495 54.9
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 6.3e-132 474.9 492 52.8
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.4e-131 473.8 466 53.2
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 1.4e-131 473.8 487 54.6
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 5.3e-131 471.9 500 50.8
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 7.0e-131 471.5 487 52.4
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.2e-130 470.7 484 54.3
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 4.5e-130 468.8 485 52.6
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 2.9e-129 466.1 378 60.8
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 6.5e-129 464.9 488 52.3
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 6.5e-129 464.9 501 51.9
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 8.5e-129 464.5 372 60.2
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 1.2e-127 460.7 372 60.8
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 1.2e-127 460.7 373 60.6
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 1.6e-127 460.3 485 50.3
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 2.1e-127 459.9 465 52.5
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 4.7e-127 458.8 469 56.5
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 6.1e-127 458.4 373 60.9
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 1.0e-126 457.6 439 54.7
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 2.3e-126 456.4 506 52.0
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 3.0e-126 456.1 500 49.8
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 1.5e-125 453.8 371 60.1
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 2.0e-125 453.4 507 48.9
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 3.3e-125 452.6 494 51.6
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 2.2e-124 449.9 466 50.6
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 2.8e-124 449.5 494 50.8
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.1e-123 447.6 479 50.9
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 2.4e-123 446.4 469 50.5
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 2.0e-122 443.4 458 50.9
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 2.7e-122 443.0 465 51.0
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 2.9e-121 439.5 465 50.8
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 3.8e-121 439.1 480 48.8
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 5.0e-121 438.7 372 58.1
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.1e-120 437.6 365 59.5
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 1.5e-120 437.2 461 50.8
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 3.2e-120 436.0 462 51.5
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 3.6e-119 432.6 454 55.1
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.3e-118 429.9 491 48.5
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 6.8e-118 428.3 471 49.0
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 1.5e-117 427.2 478 50.2
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 2.0e-117 426.8 479 49.9
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 4.4e-117 425.6 373 58.7
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 2.8e-116 422.9 484 47.9
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 6.3e-116 421.8 477 48.2
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 8.3e-116 421.4 444 51.6
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.4e-115 418.7 449 51.9
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 9.1e-115 417.9 479 47.6
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 1.6e-114 417.2 444 51.8
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.6e-114 417.2 444 51.8
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 1.6e-114 417.2 451 50.8
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 1.6e-114 417.2 465 47.5
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 1.0e-113 414.5 380 55.3
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 1.3e-113 414.1 381 55.4
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 3.8e-113 412.5 483 49.5
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 8.6e-113 411.4 370 55.4
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 9.5e-112 407.9 503 46.3
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 1.6e-111 407.1 370 53.8
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 2.1e-111 406.8 370 55.1
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 2.1e-111 406.8 365 54.8
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 8.0e-111 404.8 380 54.7
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 1.0e-110 404.4 380 55.0
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 1.8e-110 403.7 354 55.6
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 2.3e-110 403.3 382 54.2
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 2.0e-109 400.2 388 55.4
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 2.0e-109 400.2 371 55.0
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 2.0e-109 400.2 362 55.2
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 2.6e-109 399.8 356 54.5
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 2.6e-109 399.8 362 55.2
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 2.2e-108 396.7 436 50.0
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 1.4e-107 394.0 499 44.9
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 3.1e-107 392.9 441 48.5
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 9.2e-107 391.3 344 55.8
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 2.7e-106 389.8 368 54.3
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 2.7e-106 389.8 368 54.3
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 2.7e-106 389.8 368 54.3
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 5.9e-106 388.7 374 53.7
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.9e-105 386.3 424 49.5
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 1.5e-104 384.0 475 46.3
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 3.2e-99 366.3 368 48.1
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.3e-88 329.3 442 45.9
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 1.8e-86 323.9 425 47.5
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.8e-86 323.9 362 43.9
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 4.4e-77 292.7 297 50.5
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 5.6e-72 275.8 283 50.5
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 1.9e-64 250.8 348 41.7
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 7.3e-64 248.8 224 55.8
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 9.0e-62 241.9 335 42.1
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 4.9e-60 236.1 205 55.6
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 2.4e-54 217.2 387 35.1
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 1.3e-49 201.4 275 41.5
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 5.3e-46 189.5 392 32.4
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 1.0e-44 185.3 216 49.1
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.0e-24 117.9 359 28.1
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 5.0e-20 103.2 361 26.9
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 1.5e-19 101.7 120 48.3
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 2.7e-18 97.4 111 45.9
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 1.0e-17 95.5 47 83.0
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 6.7e-17 92.8 316 29.7
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 7.4e-16 89.4 130 43.1
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.3e-15 88.6 354 26.3
AagrBONN_evm.TU.Sc2ySwM_362.1561 Anthoceros agrestis HOM05D006399 ORTHO05D007988 1.3e-12 78.6 254 30.3
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.2e-12 77.8 201 30.3
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 5.7e-08 63.2 38 65.8


User provided reference genes

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