Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01005138001 Vitis vinifera HOM05D003761 ORTHO05D004412 1.1e-83 313.2 154 100.0
Eucgr.E03855 Eucalyptus grandis HOM05D003761 ORTHO05D004412 9.5e-46 187.2 150 60.0
CiPaw.09G108600 Carya illinoinensis HOM05D003761 ORTHO05D004412 4.0e-44 181.8 154 59.7
Sabra06G0004500 Salix brachista HOM05D003761 ORTHO05D004412 4.0e-44 181.8 155 56.8
Haze_07014 Corylus avellana HOM05D003761 ORTHO05D004412 5.2e-44 181.4 155 59.4
Prupe.4G004300 Prunus persica HOM05D003761 ORTHO05D004412 1.5e-43 179.9 156 57.1
Atru.chr1.2273 Acer truncatum HOM05D003761 ORTHO05D004412 2.0e-43 179.5 154 59.1
Cfa000041 Carpinus fangiana HOM05D003761 ORTHO05D004412 4.4e-43 178.3 155 58.1
QL05p067831 Quercus lobata HOM05D003761 ORTHO05D004412 4.4e-43 178.3 150 60.0
Potri.006G005600 Populus trichocarpa HOM05D003761 ORTHO05D004412 9.8e-43 177.2 154 55.2
Thecc.06G240300 Theobroma cacao HOM05D003761 ORTHO05D004412 1.1e-41 173.7 140 62.9
Ciclev10016770m.g Citrus clementina HOM05D003761 ORTHO05D004412 1.4e-41 173.3 155 58.1
PGR042G2523 Punica granatum HOM05D003761 ORTHO05D004412 5.4e-41 171.4 154 54.5
Duzib192G0597 Durio zibethinus HOM05D003761 ORTHO05D004412 9.2e-41 170.6 139 61.9
MD10G1338600 Malus domestica HOM05D003761 ORTHO05D004412 9.2e-41 170.6 160 53.8
Hma1.2p1_1175F.1_g263990 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 4.6e-40 168.3 153 54.9
Sabra16G0011000 Salix brachista HOM05D003761 ORTHO05D004412 7.8e-40 167.5 152 53.3
Potri.016G006200 Populus trichocarpa HOM05D003761 ORTHO05D004412 1.3e-39 166.8 155 52.9
CANSAT56G1869 Cannabis sativa HOM05D003761 ORTHO05D004412 1.7e-39 166.4 127 59.8
CSS0009294 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 3.0e-39 165.6 135 57.8
CSS0045719 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 3.0e-39 165.6 135 57.8
FAN25G2178 Fragaria x ananassa HOM05D003761 ORTHO05D004412 3.0e-39 165.6 161 51.6
MD05G1360900 Malus domestica HOM05D003761 ORTHO05D004412 3.9e-39 165.2 166 51.8
TAR626G0912 Trochodendron aralioides HOM05D003761 ORTHO05D004412 3.9e-39 165.2 155 56.8
Cpa.g.sc27.232 Carica papaya HOM05D003761 ORTHO05D004412 1.1e-38 163.7 147 55.8
Sc24g0000400 Simmondsia chinensis HOM05D003761 ORTHO05D004412 1.9e-38 162.9 156 55.8
FAN21G2431 Fragaria x ananassa HOM05D003761 ORTHO05D004412 2.5e-38 162.5 161 50.3
FvH4_3g00370 Fragaria vesca HOM05D003761 ORTHO05D004412 4.3e-38 161.8 159 50.9
COL.COLO4_31936 Corchorus olitorius HOM05D003761 ORTHO05D004412 5.6e-38 161.4 144 55.6
Lj2C256G8 Lonicera japonica HOM05D003761 ORTHO05D004412 9.5e-38 160.6 135 59.3
Gorai.010G248800 Gossypium raimondii HOM05D003761 ORTHO05D004412 2.8e-37 159.1 149 55.7
Dinv15342 Davidia involucrata HOM05D003761 ORTHO05D004412 1.1e-36 157.1 131 60.3
Gohir.D06G217400 Gossypium hirsutum HOM05D003761 ORTHO05D004412 1.1e-36 157.1 149 55.0
Gohir.A06G204100 Gossypium hirsutum HOM05D003761 ORTHO05D004412 1.4e-36 156.8 143 58.0
Nn1g07502 Nelumbo nucifera HOM05D003761 ORTHO05D004412 1.8e-36 156.4 155 54.8
DCAR_030834 Daucus carota HOM05D003761 ORTHO05D004412 6.8e-36 154.5 146 53.4
Actinidia39257 Actinidia chinensis HOM05D003761 ORTHO05D004412 2.0e-35 152.9 137 51.8
MBI18_g42884_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 2.6e-35 152.5 155 51.0
PSO675G1588 Papaver somniferum HOM05D003761 ORTHO05D004412 3.4e-35 152.1 147 54.4
Lalb_Chr13g0304361 Lupinus albus HOM05D003761 ORTHO05D004412 4.4e-35 151.8 127 55.9
Lj4g0001357 Lotus japonicus HOM05D003761 ORTHO05D004412 5.8e-35 151.4 134 56.0
PSO541G3650 Papaver somniferum HOM05D003761 ORTHO05D004412 5.8e-35 151.4 147 55.1
Rhsim13G0141000 Rhododendron simsii HOM05D003761 ORTHO05D004412 5.8e-35 151.4 149 51.0
Manes.09G083000 Manihot esculenta HOM05D003761 ORTHO05D004412 7.6e-35 151.0 152 48.0
TWI38G2030 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 9.9e-35 150.6 150 54.0
Sopen11g006960 Solanum pennellii HOM05D003761 ORTHO05D004412 1.3e-34 150.2 138 54.3
ECA248G3040 Erigeron canadensis HOM05D003761 ORTHO05D004412 1.7e-34 149.8 132 54.5
AUR62021816 Chenopodium quinoa HOM05D003761 ORTHO05D004412 2.2e-34 149.4 160 50.0
Lalb_Chr15g0088211 Lupinus albus HOM05D003761 ORTHO05D004412 2.2e-34 149.4 136 55.1
vmacro03612 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 2.2e-34 149.4 137 51.8
Glyma.17G005900 Glycine max HOM05D003761 ORTHO05D004412 2.9e-34 149.1 134 56.7
Psat4g002880 Pisum sativum HOM05D003761 ORTHO05D004412 3.7e-34 148.7 152 51.3
Solyc11g012170.1 Solanum lycopersicum HOM05D003761 ORTHO05D004412 4.9e-34 148.3 135 55.6
Peaxi162Scf00558g00515 Petunia axillaris HOM05D003761 ORTHO05D004412 6.4e-34 147.9 140 52.9
MBI18_g27019_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 1.4e-33 146.7 150 50.0
PGSC0003DMG400013274 Solanum tuberosum HOM05D003761 ORTHO05D004412 1.4e-33 146.7 135 55.6
CAN.G1186.30 Capsicum annuum HOM05D003761 ORTHO05D004412 3.2e-33 145.6 153 49.7
MSTRG.14590 Avicennia marina HOM05D003761 ORTHO05D004412 7.1e-33 144.4 151 52.3
HanXRQChr01g0003591 Helianthus annuus HOM05D003761 ORTHO05D004412 9.2e-33 144.1 135 51.9
Oeu057021.1 Olea europaea HOM05D003761 ORTHO05D004412 1.2e-32 143.7 130 52.3
TPR.G5987 Trifolium pratense HOM05D003761 ORTHO05D004412 1.2e-32 143.7 152 49.3
vmacro03611 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 1.2e-32 143.7 144 50.0
vmacro23224 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 1.2e-32 143.7 144 50.0
Lj6g0023004 Lotus japonicus HOM05D003761 ORTHO05D004412 1.6e-32 143.3 140 50.7
Actinidia11903 Actinidia chinensis HOM05D003761 ORTHO05D004412 2.7e-32 142.5 138 50.7
CDE10G1059 Ceratophyllum demersum HOM05D003761 ORTHO05D004412 2.7e-32 142.5 157 49.0
Medtr4g133932 Medicago truncatula HOM05D003761 ORTHO05D004412 2.7e-32 142.5 152 50.7
Ca_20995_v3 Cicer arietinum L. HOM05D003761 ORTHO05D004412 4.6e-32 141.7 142 52.1
HPP92_024936 Vanilla planifolia HOM05D003761 ORTHO05D004412 4.6e-32 141.7 131 53.4
CsaV3_1G015780 Cucumis sativus L. HOM05D003761 ORTHO05D004412 6.0e-32 141.4 154 46.1
CsaV3_UNG065500 Cucumis sativus L. HOM05D003761 ORTHO05D004412 6.0e-32 141.4 154 46.1
HPP92_024932 Vanilla planifolia HOM05D003761 ORTHO05D004412 7.8e-32 141.0 131 52.7
AUR62012843 Chenopodium quinoa HOM05D003761 ORTHO05D004412 1.0e-31 140.6 159 49.1
Cc09_g00350 Coffea canephora HOM05D003761 ORTHO05D004412 1.0e-31 140.6 144 50.7
MELO3C025526.2 Cucumis melo HOM05D003761 ORTHO05D004412 2.3e-31 139.4 154 45.5
MBI19_g14888_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 2.3e-31 139.4 123 57.7
VMungo1215G0779 Vigna mungo HOM05D003761 ORTHO05D004412 3.9e-31 138.7 131 51.9
TWI38G1412 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 6.6e-31 137.9 152 50.0
Oeu002779.1 Olea europaea HOM05D003761 ORTHO05D004412 1.5e-30 136.7 146 47.9
PGR004G2813 Punica granatum HOM05D003761 ORTHO05D004412 1.9e-30 136.3 153 46.4
arahy.Tifrunner.gnm1.ann1.UZ71G8 Arachis hypogaea HOM05D003761 ORTHO05D004412 2.5e-30 136.0 133 50.4
ClCG01G010750 Citrullus lanatus HOM05D003761 ORTHO05D004412 2.5e-30 136.0 156 47.4
arahy.Tifrunner.gnm1.ann1.YY2BB8 Arachis hypogaea HOM05D003761 ORTHO05D004412 3.3e-30 135.6 134 50.7
Sed0021615 Sechium edule HOM05D003761 ORTHO05D004412 3.3e-30 135.6 152 43.4
Phvul.003G086700 Phaseolus vulgaris HOM05D003761 ORTHO05D004412 9.6e-30 134.0 131 51.1
Lsat_1_v5_gn_1_130120 Lactuca sativa HOM05D003761 ORTHO05D004412 3.6e-29 132.1 130 52.3
Eucgr.L00155 Eucalyptus grandis HOM05D003761 ORTHO05D004412 4.7e-29 131.7 130 50.0
Sed0014180 Sechium edule HOM05D003761 ORTHO05D004412 8.1e-29 131.0 140 48.6
EL10Ac8g20260 Beta vulgaris HOM05D003761 ORTHO05D004412 3.1e-28 129.0 160 50.0
Aqoxy4G01086 Aquilegia oxysepala HOM05D003761 ORTHO05D004412 5.2e-28 128.3 155 43.9
Lsat_1_v5_gn_7_13080 Lactuca sativa HOM05D003761 ORTHO05D004412 8.9e-28 127.5 147 46.3
MSTRG.13107 Avicennia marina HOM05D003761 ORTHO05D004412 1.2e-27 127.1 139 47.5
Migut.H01629 Erythranthe guttata HOM05D003761 ORTHO05D004412 2.6e-27 125.9 154 45.5
Actinidia02285 Actinidia chinensis HOM05D000829 ORTHO05D000690 3.4e-27 125.6 129 51.9
SalBow8G1906 Salvia bowleyana HOM05D003761 ORTHO05D004412 7.6e-27 124.4 129 53.5
SGA_v2.0_scaffold7G03701 Striga asiatica HOM05D003761 ORTHO05D004412 7.6e-27 124.4 134 51.5
Nitab4.5_0000143g0280 Nicotiana tabacum HOM05D003761 ORTHO05D004412 9.9e-27 124.0 128 46.9
SGA_v2.0_scaffold186G40120 Striga asiatica HOM05D003761 ORTHO05D004412 1.3e-26 123.6 128 48.4
Hma1.2p1_1175F.1_g263980 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 3.8e-26 122.1 109 54.1
Aa31LG2G12410 Aethionema arabicum HOM05D003761 ORTHO05D004412 6.4e-26 121.3 125 50.4
Oeu025960.1 Olea europaea HOM05D003761 ORTHO05D004412 6.4e-26 121.3 131 48.1
Ah.09g233900 Amaranthus hybridus HOM05D003761 ORTHO05D004412 1.4e-25 120.2 161 45.3
THA.LOC104806736 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 2.4e-25 119.4 131 47.3
AT5G47635 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 4.2e-25 118.6 136 45.6
BcaC06g31357 Brassica carinata HOM05D003761 ORTHO05D004412 4.2e-25 118.6 136 44.1
Migut.M01442 Erythranthe guttata HOM05D003761 ORTHO05D004412 9.3e-25 117.5 140 47.9
SGA_v2.0_scaffold49G18223 Striga asiatica HOM05D003761 ORTHO05D004412 9.3e-25 117.5 135 48.9
Eucgr.L00154 Eucalyptus grandis HOM05D003761 ORTHO05D004412 1.6e-24 116.7 130 46.2
Aa31LG9G5380 Aethionema arabicum HOM05D003761 ORTHO05D004412 2.1e-24 116.3 139 45.3
Carub.0004s2229 Capsella rubella HOM05D003761 ORTHO05D004412 2.1e-24 116.3 141 45.4
Oeu025400.1 Olea europaea HOM05D003761 ORTHO05D004412 2.1e-24 116.3 131 46.6
Peaxi162Scf00442g00073 Petunia axillaris HOM05D003761 ORTHO05D004412 4.6e-24 115.2 152 45.4
Nitab4.5_0001198g0070 Nicotiana tabacum HOM05D003761 ORTHO05D004412 6.0e-24 114.8 128 46.1
A06p44900 Brassica napus HOM05D003761 ORTHO05D004412 7.8e-24 114.4 136 43.4
BraA06t27361Z Brassica rapa HOM05D003761 ORTHO05D004412 7.8e-24 114.4 136 43.4
Sp2g12340 Schrenkiella parvula HOM05D003761 ORTHO05D004412 1.0e-23 114.0 136 44.9
Os10g0208600 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 1.7e-23 113.2 138 46.4
Aa31LG5G19480 Aethionema arabicum HOM05D003761 ORTHO05D004412 3.0e-23 112.5 139 44.6
AL8G10320 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 3.0e-23 112.5 136 43.4
Carub.0008s0015 Capsella rubella HOM05D003761 ORTHO05D004412 3.9e-23 112.1 136 41.9
unitig_52.g17560 Utricularia gibba HOM05D003761 ORTHO05D004412 3.9e-23 112.1 150 39.3
BcaC04g21612 Brassica carinata HOM05D003761 ORTHO05D004412 5.1e-23 111.7 128 43.8
C09p29870 Brassica napus HOM05D003761 ORTHO05D004412 5.1e-23 111.7 128 43.8
BcaB07g30768 Brassica carinata HOM05D003761 ORTHO05D004412 6.6e-23 111.3 137 43.8
A05p06360 Brassica napus HOM05D003761 ORTHO05D004412 6.6e-23 111.3 141 43.3
BraA05t19604Z Brassica rapa HOM05D003761 ORTHO05D004412 6.6e-23 111.3 141 43.3
BcaB02g09050 Brassica carinata HOM05D003761 ORTHO05D004412 1.9e-22 109.8 141 42.6
A03p50350 Brassica napus HOM05D003761 ORTHO05D004412 1.9e-22 109.8 129 45.0
A09p23140 Brassica napus HOM05D003761 ORTHO05D004412 1.9e-22 109.8 129 44.2
BolC4t22355H Brassica oleracea HOM05D003761 ORTHO05D004412 1.9e-22 109.8 141 42.6
BraA03t14124Z Brassica rapa HOM05D003761 ORTHO05D004412 1.9e-22 109.8 129 45.0
BraA09t37917Z Brassica rapa HOM05D003761 ORTHO05D004412 1.9e-22 109.8 129 44.2
BcaC06g33549 Brassica carinata HOM05D003761 ORTHO05D004412 2.5e-22 109.4 129 45.0
C07p48660 Brassica napus HOM05D003761 ORTHO05D004412 2.5e-22 109.4 129 45.0
BolC7t45373H Brassica oleracea HOM05D003761 ORTHO05D004412 2.5e-22 109.4 129 45.0
BcaB06g29129 Brassica carinata HOM05D003761 ORTHO05D004412 3.3e-22 109.0 148 41.9
BcaNung03472 Brassica carinata HOM05D003761 ORTHO05D004412 3.3e-22 109.0 129 45.0
Thhalv10017342m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 3.3e-22 109.0 148 39.9
CARHR173680 Cardamine hirsuta HOM05D003761 ORTHO05D004412 4.3e-22 108.6 128 43.8
AL4G37770 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 5.6e-22 108.2 131 44.3
C07p31280 Brassica napus HOM05D003761 ORTHO05D004412 5.6e-22 108.2 142 41.5
Thhalv10001056m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 5.6e-22 108.2 139 40.3
BcaB02g09051 Brassica carinata HOM05D003761 ORTHO05D004412 7.3e-22 107.8 148 40.5
BolC4t28284H Brassica oleracea HOM05D003761 ORTHO05D004412 7.3e-22 107.8 148 40.5
AT4G17215 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 9.6e-22 107.5 132 43.2
MSTRG.7132 Avicennia marina HOM05D003761 ORTHO05D004412 9.6e-22 107.5 131 44.3
CARHR223820 Cardamine hirsuta HOM05D003761 ORTHO05D004412 9.6e-22 107.5 129 45.0
HanXRQChr15g0470241 Helianthus annuus HOM05D003761 ORTHO05D004412 9.6e-22 107.5 130 48.5
Sc05g0009870 Simmondsia chinensis HOM05D003761 ORTHO05D004412 1.3e-21 107.1 101 53.5
BcaC09g50449 Brassica carinata HOM05D003761 ORTHO05D004412 1.6e-21 106.7 129 45.0
C01p25300 Brassica napus HOM05D003761 ORTHO05D004412 1.6e-21 106.7 129 45.0
BolC1t02480H Brassica oleracea HOM05D003761 ORTHO05D004412 1.6e-21 106.7 129 45.0
BcaNung03474 Brassica carinata HOM05D003761 ORTHO05D004412 2.1e-21 106.3 129 44.2
BcaC02g07354 Brassica carinata HOM05D003761 ORTHO05D004412 2.8e-21 105.9 148 39.2
Carub.0007s2420 Capsella rubella HOM05D003761 ORTHO05D004412 2.8e-21 105.9 129 45.0
BolC7t43669H Brassica oleracea HOM05D003761 ORTHO05D004412 3.6e-21 105.5 136 41.2
Sp4g22430 Schrenkiella parvula HOM05D003761 ORTHO05D004412 3.6e-21 105.5 148 39.9
Thhalv10026465m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 4.8e-21 105.1 129 41.9
AT2G40113 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 6.2e-21 104.8 149 40.9
CARHR135090 Cardamine hirsuta HOM05D003761 ORTHO05D004412 6.2e-21 104.8 148 39.2
ATR0827G170 Amborella trichopoda HOM05D003761 ORTHO05D004412 8.1e-21 104.4 140 45.0
AL7G37500 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 8.1e-21 104.4 132 42.4
BraA01t01941Z Brassica rapa HOM05D003761 ORTHO05D004412 1.1e-20 104.0 138 43.5
A04p30050 Brassica napus HOM05D003761 ORTHO05D004412 1.8e-20 103.2 148 39.2
BraA04t18501Z Brassica rapa HOM05D003761 ORTHO05D004412 3.1e-20 102.4 148 39.2
Sp7g16980 Schrenkiella parvula HOM05D003761 ORTHO05D004412 5.3e-20 101.7 129 43.4
THA.LOC104798379 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 1.2e-19 100.5 132 43.9
BcaNung00112 Brassica carinata HOM05D003761 ORTHO05D004412 1.5e-19 100.1 120 44.2
Sopen11g007440 Solanum pennellii HOM05D003761 ORTHO05D004412 9.9e-19 97.4 139 43.2
PGSC0003DMG400013298 Solanum tuberosum HOM05D003761 ORTHO05D004412 9.9e-19 97.4 139 41.7
Zm00001eb050510 Zea mays HOM05D003761 ORTHO05D004412 9.9e-19 97.4 145 40.7
Solyc11g012705.2 Solanum lycopersicum HOM05D003761 ORTHO05D004412 1.3e-18 97.1 139 43.2
Os10g0206500 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 1.7e-18 96.7 133 40.6
Cpa.g.sc27.234 Carica papaya HOM05D003761 ORTHO05D004412 3.8e-18 95.5 101 46.5
BcaC06g34236 Brassica carinata HOM05D003761 ORTHO05D004412 1.1e-17 94.0 128 40.6
CAN.G1156.14 Capsicum annuum HOM05D003761 ORTHO05D004412 2.7e-16 89.4 141 38.3
BolC9t55850H Brassica oleracea HOM05D003761 ORTHO05D004412 2.8e-13 79.3 90 43.3
SEGI_00399 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 3.6e-13 79.0 138 36.2
C04p67800 Brassica napus HOM05D003761 ORTHO05D004412 1.9e-09 66.6 95 38.9
SEGI_28043 Sequoiadendron giganteum HOM05D003761 ORTHO05D004412 3.0e-07 59.3 119 33.6
SMO358G0492 Selaginella moellendorffii HOM05D003328 ORTHO05D003722 6.7e-07 58.2 84 38.1
SEGI_39801 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 8.7e-07 57.8 140 32.1
Migut.K00883 Erythranthe guttata HOM05D003328 ORTHO05D003722 2.5e-06 56.2 144 31.9
COL.COLO4_19736 Corchorus olitorius HOM05D003328 ORTHO05D003722 3.3e-06 55.8 133 30.8
SEGI_30342 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 4.3e-06 55.5 140 32.9
Gohir.A07G179500 Gossypium hirsutum HOM05D003328 ORTHO05D003722 9.6e-06 54.3 151 30.5
Oeu062183.1 Olea europaea HOM05D003328 ORTHO05D003722 9.6e-06 54.3 136 30.1


User provided reference genes

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