Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01005094001 Vitis vinifera HOM05D004524 ORTHO05D005477 3.1e-75 285.0 141 100.0
GSVIVG01005092001 Vitis vinifera HOM05D004524 ORTHO05D005477 5.6e-53 211.1 105 100.0
Dinv26771 Davidia involucrata HOM05D004524 ORTHO05D005477 6.9e-51 204.1 105 93.3
vmacro17888 Vaccinium macrocarpon HOM05D004524 ORTHO05D005477 2.2e-49 199.1 105 91.4
Actinidia30986 Actinidia chinensis HOM05D004524 ORTHO05D005477 2.9e-49 198.7 105 90.5
Rhsim08G0108900 Rhododendron simsii HOM05D004524 ORTHO05D005477 1.2e-47 193.4 105 87.6
Prupe.7G144700 Prunus persica HOM05D004524 ORTHO05D005477 1.6e-47 193.0 105 89.5
Aqoxy5G01755 Aquilegia oxysepala HOM05D004524 ORTHO05D005477 2.7e-47 192.2 105 88.6
QL06p044160 Quercus lobata HOM05D004524 ORTHO05D005477 4.6e-47 191.4 104 89.4
Ah.02g126100 Amaranthus hybridus HOM05D004524 ORTHO05D005477 1.3e-46 189.9 105 85.7
Sabra07G0030300 Salix brachista HOM05D004524 ORTHO05D005477 1.3e-46 189.9 105 83.8
Cfa004228 Carpinus fangiana HOM05D004524 ORTHO05D005477 1.8e-46 189.5 104 88.5
Eucgr.H01945 Eucalyptus grandis HOM05D004524 ORTHO05D005477 1.8e-46 189.5 105 85.7
EL10Ac6g14835 Beta vulgaris HOM05D004524 ORTHO05D005477 2.3e-46 189.1 105 84.8
MD02G1159300 Malus domestica HOM05D004524 ORTHO05D005477 3.0e-46 188.7 105 87.6
FAN19G0876 Fragaria x ananassa HOM05D004524 ORTHO05D005477 3.9e-46 188.3 104 87.5
FAN23G1697 Fragaria x ananassa HOM05D004524 ORTHO05D005477 3.9e-46 188.3 104 87.5
FAN26G3430 Fragaria x ananassa HOM05D004524 ORTHO05D005477 3.9e-46 188.3 104 87.5
FAN28G0821 Fragaria x ananassa HOM05D004524 ORTHO05D005477 3.9e-46 188.3 104 87.5
RcHm_v2.0_Chr2g0103341 Rosa chinensis HOM05D004524 ORTHO05D005477 3.9e-46 188.3 104 87.5
CiPaw.01G027900 Carya illinoinensis HOM05D004524 ORTHO05D005477 6.7e-46 187.6 104 87.5
Nn5g29420 Nelumbo nucifera HOM05D004524 ORTHO05D005477 6.7e-46 187.6 105 85.7
Solyc02g090130.4 Solanum lycopersicum HOM05D004524 ORTHO05D005477 6.7e-46 187.6 104 85.6
Sopen02g034830 Solanum pennellii HOM05D004524 ORTHO05D005477 6.7e-46 187.6 104 85.6
TAR628G0958 Trochodendron aralioides HOM05D004524 ORTHO05D005477 6.7e-46 187.6 105 88.6
AUR62027230 Chenopodium quinoa HOM05D004524 ORTHO05D005477 8.7e-46 187.2 105 84.8
Sc16g0001530 Simmondsia chinensis HOM05D004524 ORTHO05D005477 8.7e-46 187.2 104 87.5
TWI53G1766 Tripterygium wilfordii HOM05D004524 ORTHO05D005477 8.7e-46 187.2 105 87.6
Atru.chr3.464 Acer truncatum HOM05D004524 ORTHO05D005477 1.9e-45 186.0 105 85.7
AUR62003242 Chenopodium quinoa HOM05D004524 ORTHO05D005477 1.9e-45 186.0 105 83.8
Haze_15172 Corylus avellana HOM05D004524 ORTHO05D005477 1.9e-45 186.0 104 86.5
CANSAT01G1357 Cannabis sativa HOM05D004524 ORTHO05D005477 4.3e-45 184.9 105 85.7
Peaxi162Scf00535g00735 Petunia axillaris HOM05D004524 ORTHO05D005477 4.3e-45 184.9 104 86.5
Cc07_g05430 Coffea canephora HOM05D004524 ORTHO05D005477 7.4e-45 184.1 105 83.8
Potri.007G034900 Populus trichocarpa HOM05D004524 ORTHO05D005477 7.4e-45 184.1 105 82.9
Nitab4.5_0000108g0200 Nicotiana tabacum HOM05D004524 ORTHO05D005477 1.3e-44 183.3 110 80.0
PGR102G0585 Punica granatum HOM05D004524 ORTHO05D005477 1.3e-44 183.3 105 83.8
Hund14111 Selenicereus undatus HOM05D004524 ORTHO05D005477 2.1e-44 182.6 105 85.7
CAN.G836.23 Capsicum annuum HOM05D004524 ORTHO05D005477 3.7e-44 181.8 104 82.7
Medtr8g078970 Medicago truncatula HOM05D004524 ORTHO05D005477 6.2e-44 181.0 105 83.8
Lalb_Chr05g0226951 Lupinus albus HOM05D004524 ORTHO05D005477 8.1e-44 180.6 105 83.8
Glyma.16G144200 Glycine max HOM05D004524 ORTHO05D005477 1.4e-43 179.9 105 84.8
Gohir.D11G194900 Gossypium hirsutum HOM05D004524 ORTHO05D005477 1.8e-43 179.5 105 82.9
Gorai.007G208400 Gossypium raimondii HOM05D004524 ORTHO05D005477 1.8e-43 179.5 105 82.9
PSO170G3447 Papaver somniferum HOM05D004524 ORTHO05D005477 1.8e-43 179.5 105 82.9
Lj4g0019712 Lotus japonicus HOM05D004524 ORTHO05D005477 2.4e-43 179.1 105 83.8
Duzib187G1201 Durio zibethinus HOM05D004524 ORTHO05D005477 3.1e-43 178.7 104 80.8
Gohir.A11G188400 Gossypium hirsutum HOM05D004524 ORTHO05D005477 3.1e-43 178.7 105 82.9
TPR.G11249 Trifolium pratense HOM05D004524 ORTHO05D005477 4.0e-43 178.3 105 82.9
VMungo0251G2856 Vigna mungo HOM05D004524 ORTHO05D005477 9.0e-43 177.2 105 82.9
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 1.5e-42 176.4 104 81.7
Lsat_1_v5_gn_3_94181 Lactuca sativa HOM05D004524 ORTHO05D005477 1.5e-42 176.4 105 82.9
PSO700G0043 Papaver somniferum HOM05D004524 ORTHO05D005477 1.5e-42 176.4 105 81.9
COL.COLO4_22187 Corchorus olitorius HOM05D004524 ORTHO05D005477 2.0e-42 176.0 105 81.0
Ca_22222_v3 Cicer arietinum L. HOM05D004524 ORTHO05D005477 2.6e-42 175.6 105 81.0
Ciclev10024678m.g Citrus clementina HOM05D004524 ORTHO05D005477 3.4e-42 175.3 105 80.0
arahy.Tifrunner.gnm1.ann1.7NUW0V Arachis hypogaea HOM05D004524 ORTHO05D005477 7.6e-42 174.1 105 81.9
arahy.Tifrunner.gnm1.ann1.S59764 Arachis hypogaea HOM05D004524 ORTHO05D005477 7.6e-42 174.1 105 81.9
ECA246G4564 Erigeron canadensis HOM05D004524 ORTHO05D005477 1.0e-41 173.7 105 80.0
Psat0s4220g0040 Pisum sativum HOM05D004524 ORTHO05D005477 1.0e-41 173.7 105 81.0
Thecc.01G046200 Theobroma cacao HOM05D004524 ORTHO05D005477 1.0e-41 173.7 105 79.0
Manes.13G131650 Manihot esculenta HOM05D004524 ORTHO05D005477 3.8e-41 171.8 105 78.1
Zm00001eb030660 Zea mays HOM05D004524 ORTHO05D005477 3.8e-41 171.8 104 80.8
SGA_v2.0_scaffold15G07211 Striga asiatica HOM05D004524 ORTHO05D005477 6.5e-41 171.0 104 80.8
HPP92_018815 Vanilla planifolia HOM05D004524 ORTHO05D005477 8.4e-41 170.6 104 78.8
Sed0025355 Sechium edule HOM05D004524 ORTHO05D005477 1.9e-40 169.5 105 75.2
Migut.H00497 Erythranthe guttata HOM05D004524 ORTHO05D005477 2.5e-40 169.1 104 80.8
THA.LOC104827123 Tarenaya hassleriana HOM05D004524 ORTHO05D005477 2.5e-40 169.1 104 80.8
SalBow1G7798 Salvia bowleyana HOM05D004524 ORTHO05D005477 5.5e-40 167.9 104 79.8
Aa31LG4G18620 Aethionema arabicum HOM05D004524 ORTHO05D005477 2.7e-39 165.6 104 76.9
ATR0733G201 Amborella trichopoda HOM05D004524 ORTHO05D005477 3.5e-39 165.2 106 78.3
CARHR159880 Cardamine hirsuta HOM05D004524 ORTHO05D005477 4.6e-39 164.9 104 76.0
Thhalv10027614m.g Eutrema salsugineum HOM05D004524 ORTHO05D005477 4.6e-39 164.9 104 76.0
MSTRG.23802 Avicennia marina HOM05D004524 ORTHO05D005477 6.0e-39 164.5 104 79.8
Migut.H00499 Erythranthe guttata HOM05D004524 ORTHO05D005477 6.0e-39 164.5 104 77.9
HanXRQChr12g0378491 Helianthus annuus HOM05D004524 ORTHO05D005477 6.0e-39 164.5 102 79.4
AL5G30510 Arabidopsis lyrata HOM05D004524 ORTHO05D005477 5.1e-38 161.4 104 74.0
AT3G50380 Arabidopsis thaliana HOM05D004524 ORTHO05D005477 5.1e-38 161.4 104 74.0
BcaB05g23215 Brassica carinata HOM05D004524 ORTHO05D005477 5.1e-38 161.4 104 74.0
Carub.0005s1670 Capsella rubella HOM05D004524 ORTHO05D005477 5.1e-38 161.4 104 74.0
FvH4_5g25081 Fragaria vesca HOM05D004524 ORTHO05D005477 6.7e-38 161.0 94 83.0
CDE01G0297 Ceratophyllum demersum HOM05D004524 ORTHO05D005477 1.5e-37 159.8 105 74.3
BcaC09g50025 Brassica carinata HOM05D004524 ORTHO05D005477 3.3e-37 158.7 104 74.0
A01p24160 Brassica napus HOM05D004524 ORTHO05D005477 3.3e-37 158.7 104 74.0
C01p29870 Brassica napus HOM05D004524 ORTHO05D005477 3.3e-37 158.7 104 74.0
BolC1t02927H Brassica oleracea HOM05D004524 ORTHO05D005477 3.3e-37 158.7 104 74.0
BraA01t02328Z Brassica rapa HOM05D004524 ORTHO05D005477 3.3e-37 158.7 104 74.0
MELO3C007516.2 Cucumis melo HOM05D004524 ORTHO05D005477 4.3e-37 158.3 105 72.4
CsaV3_6G042750 Cucumis sativus L. HOM05D004524 ORTHO05D005477 1.4e-35 153.3 105 69.5
unitig_62.g23407 Utricularia gibba HOM05D004524 ORTHO05D005477 4.1e-35 151.8 104 72.1
Mapoly0053s0053 Marchantia polymorpha HOM05D004524 ORTHO05D005477 4.3e-29 131.7 106 62.3
Pp3c8_13080 Physcomitrium patens HOM05D004524 ORTHO05D005477 4.3e-29 131.7 106 57.5
AagrBONN_evm.TU.Sc2ySwM_344.2829 Anthoceros agrestis HOM05D004524 ORTHO05D005477 9.7e-29 130.6 134 51.5
FvH4_1g14580 Fragaria vesca HOM05D004524 ORTHO05D005477 5.3e-27 124.8 104 64.4
ClCG01G016440 Citrullus lanatus HOM05D004524 ORTHO05D005477 1.5e-26 123.2 96 65.6
SEGI_08749 Sequoiadendron giganteum HOM05D004524 ORTHO05D005477 1.9e-24 116.3 102 54.9
CBR_g51675 Chara braunii HOM05D004524 ORTHO05D005477 7.2e-24 114.4 106 51.9
MBI16_g31332_MAGBIO Magnolia biondii HOM05D004524 ORTHO05D005477 3.3e-21 105.5 57 87.7
FAN18G1633 Fragaria x ananassa HOM05D004524 ORTHO05D005477 2.4e-19 99.4 94 58.5
Sc03g0009100 Simmondsia chinensis HOM05D004524 ORTHO05D005477 1.1e-16 90.5 102 45.1
Lsat_1_v5_gn_8_103301 Lactuca sativa HOM05D004524 ORTHO05D005477 6.7e-14 81.3 139 38.1
Phvul.003G249100 Phaseolus vulgaris HOM05D004524 ORTHO05D005477 1.0e-06 57.4 30 83.3
FvH4_5g34340 Fragaria vesca HOM05D004524 ORTHO05D005477 2.3e-06 56.2 30 80.0


User provided reference genes

Program Settings