Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 3.2e-72 275.0 140 100.0
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 7.3e-45 184.1 140 67.1
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 4.6e-39 164.9 141 65.2
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 1.5e-37 159.8 138 60.1
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 1.9e-37 159.5 140 62.9
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 4.8e-36 154.8 140 57.9
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 4.0e-35 151.8 139 57.6
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 6.9e-35 151.0 139 59.7
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 3.4e-34 148.7 138 61.6
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 4.5e-34 148.3 138 58.0
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 4.5e-34 148.3 139 58.3
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 9.9e-34 147.1 139 59.7
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 1.3e-33 146.7 142 59.2
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 1.3e-33 146.7 140 56.4
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 1.3e-33 146.7 99 72.7
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 1.7e-33 146.4 131 58.8
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 2.9e-33 145.6 134 59.7
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 3.8e-33 145.2 130 60.0
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 4.9e-33 144.8 138 59.4
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 4.9e-33 144.8 139 57.6
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 8.4e-33 144.1 136 55.9
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 1.1e-32 143.7 138 58.7
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 1.4e-32 143.3 141 59.6
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 2.4e-32 142.5 139 55.4
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 2.4e-32 142.5 137 59.9
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.4e-32 142.5 137 59.9
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 4.2e-32 141.7 130 59.2
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 7.1e-32 141.0 99 71.7
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 9.3e-32 140.6 99 71.7
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 1.2e-31 140.2 139 56.8
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 1.2e-31 140.2 139 56.8
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 1.2e-31 140.2 139 56.8
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 1.6e-31 139.8 138 59.4
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 2.1e-31 139.4 134 59.0
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 3.5e-31 138.7 130 57.7
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 6.0e-31 137.9 144 55.6
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 6.0e-31 137.9 139 58.3
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 6.0e-31 137.9 129 60.5
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 1.3e-30 136.7 130 56.9
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 6.7e-30 134.4 119 62.2
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 6.7e-30 134.4 98 69.4
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 6.7e-30 134.4 116 66.4
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.1e-29 133.7 116 65.5
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.1e-29 133.7 137 57.7
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 1.5e-29 133.3 138 52.9
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 4.3e-29 131.7 138 51.4
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 5.6e-29 131.3 133 55.6
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 5.6e-29 131.3 130 56.9
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 6.2e-28 127.9 139 48.9
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 1.1e-27 127.1 101 65.3
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 3.1e-27 125.6 133 54.9
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 4.0e-27 125.2 109 56.0
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 4.0e-27 125.2 136 52.2
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 6.9e-27 124.4 130 53.1
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 6.9e-27 124.4 137 54.0
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 9.0e-27 124.0 130 52.3
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 7.6e-26 120.9 109 55.0
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 2.9e-25 119.0 95 65.3
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 8.4e-25 117.5 138 50.0
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 8.4e-25 117.5 127 52.0
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 1.4e-24 116.7 131 52.7
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 2.4e-24 115.9 118 56.8
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 4.2e-24 115.2 130 50.0
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 5.5e-24 114.8 139 48.2
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 1.2e-23 113.6 114 56.1
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 6.0e-23 111.3 72 75.0
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 1.0e-22 110.5 66 83.3
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 1.8e-22 109.8 131 50.4
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 3.9e-22 108.6 134 47.8
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 3.9e-22 108.6 95 58.9
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 5.1e-22 108.2 63 81.0
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 5.1e-22 108.2 70 74.3
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 6.7e-22 107.8 103 59.2
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 1.1e-21 107.1 63 81.0
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 1.1e-21 107.1 82 65.9
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 1.1e-21 107.1 63 81.0
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 1.5e-21 106.7 93 60.2
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.5e-21 106.7 126 46.8
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 1.9e-21 106.3 105 54.3
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 2.5e-21 105.9 126 47.6
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 3.3e-21 105.5 89 61.8
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 4.3e-21 105.1 61 80.3
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 5.6e-21 104.8 126 46.0
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 7.4e-21 104.4 124 50.8
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 7.4e-21 104.4 105 55.2
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 9.6e-21 104.0 97 57.7
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 1.3e-20 103.6 140 45.7
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 1.3e-20 103.6 63 77.8
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 1.3e-20 103.6 91 57.1
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 1.6e-20 103.2 102 54.9
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 2.1e-20 102.8 91 57.1
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 2.8e-20 102.4 86 60.5
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 2.8e-20 102.4 69 68.1
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 4.8e-20 101.7 98 58.2
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 1.8e-19 99.8 75 66.7
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 3.1e-19 99.0 87 58.6
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 3.4e-18 95.5 127 48.0
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 3.8e-17 92.0 99 48.5
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 1.1e-16 90.5 92 55.4
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 2.5e-16 89.4 73 63.0
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 5.5e-16 88.2 83 59.0
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 5.5e-16 88.2 83 59.0
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 2.1e-15 86.3 64 65.6
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 7.9e-15 84.3 55 78.2
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 5.1e-14 81.6 69 63.8
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 5.1e-14 81.6 100 44.0
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 2.1e-12 76.3 53 66.0
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 4.1e-11 72.0 96 50.0
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.5e-10 70.1 90 48.9


User provided reference genes

Program Settings