Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01004916001 Vitis vinifera HOM05D005292 ORTHO05D006473 2.9e-232 808.1 398 100.0
QL12p014915 Quercus lobata HOM05D005292 ORTHO05D006473 1.8e-176 622.9 356 86.0
Cpa.g.sc29.95 Carica papaya HOM05D005292 ORTHO05D006473 5.1e-176 621.3 370 83.0
Cfa012803 Carpinus fangiana HOM05D005292 ORTHO05D006473 3.3e-175 618.6 362 84.3
COL.COLO4_31983 Corchorus olitorius HOM05D005292 ORTHO05D006473 7.4e-175 617.5 346 87.0
CiPaw.11G147800 Carya illinoinensis HOM05D005292 ORTHO05D006473 9.6e-175 617.1 345 88.1
Duzib084G0213 Durio zibethinus HOM05D005292 ORTHO05D006473 9.6e-175 617.1 381 80.3
Thecc.03G261400 Theobroma cacao HOM05D005292 ORTHO05D006473 4.0e-173 611.7 372 81.2
Ciclev10020454m.g Citrus clementina HOM05D005292 ORTHO05D006473 1.2e-172 610.1 347 85.9
Atru.chr9.1428 Acer truncatum HOM05D005292 ORTHO05D006473 4.5e-172 608.2 371 81.4
CANSAT80G2034 Cannabis sativa HOM05D005292 ORTHO05D006473 4.2e-170 601.7 346 85.8
Nn1g01261 Nelumbo nucifera HOM05D005292 ORTHO05D006473 3.5e-169 598.6 374 78.6
Prupe.5G079200 Prunus persica HOM05D005292 ORTHO05D006473 6.0e-169 597.8 374 80.2
CiPaw.12G105300 Carya illinoinensis HOM05D005292 ORTHO05D006473 1.0e-168 597.0 346 85.5
MD04G1079900 Malus domestica HOM05D005292 ORTHO05D006473 1.5e-167 593.2 372 78.5
Ca_12278_v3 Cicer arietinum L. HOM05D005292 ORTHO05D006473 4.3e-167 591.7 376 79.0
Gohir.D12G223000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 7.4e-167 590.9 346 83.5
Glyma.17G134700 Glycine max HOM05D005292 ORTHO05D006473 1.3e-166 590.1 351 83.8
TAR636G1323 Trochodendron aralioides HOM05D005292 ORTHO05D006473 6.2e-166 587.8 350 83.1
Potri.001G118000 Populus trichocarpa HOM05D005292 ORTHO05D006473 8.2e-166 587.4 370 79.7
TWI15G0139 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 8.2e-166 587.4 367 79.0
Gohir.D03G157800 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.8e-165 586.3 345 83.8
arahy.Tifrunner.gnm1.ann1.YRMJ3W Arachis hypogaea HOM05D005292 ORTHO05D006473 2.4e-165 585.9 373 79.1
arahy.Tifrunner.gnm1.ann1.VS5X7Y Arachis hypogaea HOM05D005292 ORTHO05D006473 3.1e-165 585.5 373 78.8
Lj4g0005126 Lotus japonicus HOM05D005292 ORTHO05D006473 4.0e-165 585.1 344 83.4
Glyma.05G052500 Glycine max HOM05D005292 ORTHO05D006473 9.0e-165 583.9 352 82.7
Lalb_Chr05g0225431 Lupinus albus HOM05D005292 ORTHO05D006473 4.5e-164 581.6 369 79.4
Gorai.008G239300 Gossypium raimondii HOM05D005292 ORTHO05D006473 5.8e-164 581.3 371 78.4
VMungo1215G1740 Vigna mungo HOM05D005292 ORTHO05D006473 1.0e-163 580.5 361 80.1
Gohir.A03G012000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.3e-163 580.1 345 83.5
Manes.02G033900 Manihot esculenta HOM05D005292 ORTHO05D006473 1.3e-163 580.1 351 83.2
Dinv21573 Davidia involucrata HOM05D005292 ORTHO05D006473 6.5e-163 577.8 372 78.2
Sed0004099 Sechium edule HOM05D005292 ORTHO05D006473 6.5e-163 577.8 353 81.0
TPR.G37684 Trifolium pratense HOM05D005292 ORTHO05D006473 1.9e-162 576.2 372 77.4
Oeu016513.1 Olea europaea HOM05D005292 ORTHO05D006473 4.2e-162 575.1 336 83.6
CSS0004035 Camellia sinensis var. sinensis HOM05D005292 ORTHO05D006473 6.1e-161 571.2 384 75.3
Phvul.003G214500 Phaseolus vulgaris HOM05D005292 ORTHO05D006473 6.1e-161 571.2 351 81.2
Hma1.2p1_0367F.1_g137040 Hydrangea macrophylla HOM05D005292 ORTHO05D006473 7.9e-161 570.9 372 75.8
Peaxi162Scf00271g00021 Petunia axillaris HOM05D005292 ORTHO05D006473 1.3e-160 570.1 369 75.6
Nitab4.5_0003534g0020 Nicotiana tabacum HOM05D005292 ORTHO05D006473 1.8e-160 569.7 369 75.9
Gorai.003G166300 Gossypium raimondii HOM05D005292 ORTHO05D006473 3.9e-160 568.5 345 82.3
Solyc08g079450.3 Solanum lycopersicum HOM05D005292 ORTHO05D006473 6.7e-160 567.8 372 75.0
Sopen08g027820 Solanum pennellii HOM05D005292 ORTHO05D006473 1.1e-159 567.0 372 75.0
Dinv39082 Davidia involucrata HOM05D005292 ORTHO05D006473 3.3e-159 565.5 375 77.1
CAN.G630.87 Capsicum annuum HOM05D005292 ORTHO05D006473 4.3e-159 565.1 340 81.8
Medtr4g102260 Medicago truncatula HOM05D005292 ORTHO05D006473 4.3e-159 565.1 379 76.0
Lj8A255T56 Lonicera japonica HOM05D005292 ORTHO05D006473 1.6e-158 563.1 355 79.4
Potri.003G114900 Populus trichocarpa HOM05D005292 ORTHO05D006473 3.7e-158 562.0 376 74.7
MSTRG.12063 Avicennia marina HOM05D005292 ORTHO05D006473 6.3e-158 561.2 374 73.5
PGSC0003DMG400003959 Solanum tuberosum HOM05D005292 ORTHO05D006473 1.4e-157 560.1 373 74.3
Gorai.007G021400 Gossypium raimondii HOM05D005292 ORTHO05D006473 1.8e-157 559.7 346 80.3
PSO782G2032 Papaver somniferum HOM05D005292 ORTHO05D006473 1.8e-157 559.7 315 86.0
CsaV3_5G003780 Cucumis sativus L. HOM05D005292 ORTHO05D006473 2.0e-156 556.2 352 79.8
RcHm_v2.0_Chr7g0201621 Rosa chinensis HOM05D005292 ORTHO05D006473 2.0e-156 556.2 373 76.4
Gohir.A11G020400 Gossypium hirsutum HOM05D005292 ORTHO05D006473 5.9e-156 554.7 345 80.0
Psat4g068120 Pisum sativum HOM05D005292 ORTHO05D006473 7.7e-156 554.3 378 74.6
Cc08_g13210 Coffea canephora HOM05D005292 ORTHO05D006473 1.0e-155 553.9 361 76.7
Eucgr.D01991 Eucalyptus grandis HOM05D005292 ORTHO05D006473 1.9e-154 549.7 338 80.2
THA.LOC104813867 Tarenaya hassleriana HOM05D005292 ORTHO05D006473 2.5e-154 549.3 296 86.5
PGR031G2306 Punica granatum HOM05D005292 ORTHO05D006473 1.2e-153 547.0 328 82.6
FAN08G1347 Fragaria x ananassa HOM05D005292 ORTHO05D006473 3.6e-153 545.4 369 75.6
Gohir.D11G020100 Gossypium hirsutum HOM05D005292 ORTHO05D006473 3.6e-153 545.4 345 78.6
Aqoxy7G00654 Aquilegia oxysepala HOM05D005292 ORTHO05D006473 6.1e-153 544.7 337 80.1
FAN04G0899 Fragaria x ananassa HOM05D005292 ORTHO05D006473 6.1e-153 544.7 374 74.9
FAN13G3324 Fragaria x ananassa HOM05D005292 ORTHO05D006473 3.9e-152 542.0 374 74.9
PSO478G4449 Papaver somniferum HOM05D005292 ORTHO05D006473 3.9e-152 542.0 315 84.1
ECA233G3282 Erigeron canadensis HOM05D005292 ORTHO05D006473 5.1e-152 541.6 353 76.5
FAN18G3339 Fragaria x ananassa HOM05D005292 ORTHO05D006473 5.1e-152 541.6 374 74.9
Thhalv10028717m.g Eutrema salsugineum HOM05D005292 ORTHO05D006473 9.7e-151 537.3 334 78.1
MBI12_g31646_MAGBIO Magnolia biondii HOM05D005292 ORTHO05D006473 1.3e-150 537.0 348 77.6
Actinidia02093 Actinidia chinensis HOM05D005292 ORTHO05D006473 2.8e-150 535.8 378 71.2
Haze_08610 Corylus avellana HOM05D005292 ORTHO05D006473 1.1e-149 533.9 420 68.6
Sabra01G0090700 Salix brachista HOM05D005292 ORTHO05D006473 1.1e-149 533.9 466 62.9
Nitab4.5_0007591g0040 Nicotiana tabacum HOM05D005292 ORTHO05D006473 1.4e-149 533.5 371 72.5
Sc22g0000600 Simmondsia chinensis HOM05D005292 ORTHO05D006473 1.4e-149 533.5 318 80.2
AL6G47090 Arabidopsis lyrata HOM05D005292 ORTHO05D006473 3.1e-149 532.3 299 83.9
Gohir.A12G220700 Gossypium hirsutum HOM05D005292 ORTHO05D006473 5.3e-149 531.6 324 80.2
Hund14648 Selenicereus undatus HOM05D005292 ORTHO05D006473 5.3e-149 531.6 321 80.1
CARHR254020 Cardamine hirsuta HOM05D005292 ORTHO05D006473 6.9e-149 531.2 294 84.4
SGA_v2.0_scaffold120G32820 Striga asiatica HOM05D005292 ORTHO05D006473 6.9e-149 531.2 406 68.2
Sp6g05330 Schrenkiella parvula HOM05D005292 ORTHO05D006473 2.6e-148 529.3 301 82.7
Carub.0006s3135 Capsella rubella HOM05D005292 ORTHO05D006473 4.5e-148 528.5 305 81.6
CDE09G1063 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 4.5e-148 528.5 308 79.5
EL10Ac5g12610 Beta vulgaris HOM05D005292 ORTHO05D006473 3.8e-147 525.4 336 76.5
DCAR_006803 Daucus carota HOM05D005292 ORTHO05D006473 3.8e-147 525.4 352 75.6
Migut.A00832 Erythranthe guttata HOM05D005292 ORTHO05D006473 1.9e-146 523.1 289 85.1
HanXRQChr07g0188671 Helianthus annuus HOM05D005292 ORTHO05D006473 1.9e-146 523.1 349 75.4
AT4G12230 Arabidopsis thaliana HOM05D005292 ORTHO05D006473 2.5e-146 522.7 325 78.2
HanXRQChr02g0046251 Helianthus annuus HOM05D005292 ORTHO05D006473 4.2e-146 521.9 350 75.4
ClCG01G003660 Citrullus lanatus HOM05D005292 ORTHO05D006473 5.5e-146 521.5 362 74.3
BcaC01g04601 Brassica carinata HOM05D005292 ORTHO05D006473 7.2e-146 521.2 334 76.6
BcaB01g02654 Brassica carinata HOM05D005292 ORTHO05D006473 2.1e-145 519.6 333 76.9
SalBow1G6483 Salvia bowleyana HOM05D005292 ORTHO05D006473 1.0e-144 517.3 369 71.3
C03p35880 Brassica napus HOM05D005292 ORTHO05D006473 1.8e-144 516.5 335 76.4
BolC3t15896H Brassica oleracea HOM05D005292 ORTHO05D006473 1.8e-144 516.5 335 76.4
A03p29600 Brassica napus HOM05D005292 ORTHO05D006473 1.1e-143 513.8 334 76.0
BraA03t12155Z Brassica rapa HOM05D005292 ORTHO05D006473 1.5e-143 513.5 334 75.7
AUR62010507 Chenopodium quinoa HOM05D005292 ORTHO05D006473 2.0e-143 513.1 383 65.8
Aa31LG9G10310 Aethionema arabicum HOM05D005292 ORTHO05D006473 3.3e-143 512.3 357 71.7
vmacro14043 Vaccinium macrocarpon HOM05D005292 ORTHO05D006473 2.0e-140 503.1 329 76.0
Nn4g26373 Nelumbo nucifera HOM05D005292 ORTHO05D006473 1.3e-139 500.4 365 71.0
Os10g0169800 Oryza sativa ssp. japonica HOM05D005292 ORTHO05D006473 8.5e-139 497.7 343 68.8
Ah.12g058260 Amaranthus hybridus HOM05D005292 ORTHO05D006473 1.9e-138 496.5 357 69.7
TWI15G0397 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 9.4e-138 494.2 371 69.8
unitig_744.g24320 Utricularia gibba HOM05D005292 ORTHO05D006473 2.3e-136 489.6 359 67.4
Ah.02g116220 Amaranthus hybridus HOM05D005292 ORTHO05D006473 3.0e-136 489.2 282 79.8
Zm00001eb026990 Zea mays HOM05D005292 ORTHO05D006473 3.3e-135 485.7 301 74.4
ATR0757G031 Amborella trichopoda HOM05D005292 ORTHO05D006473 3.1e-133 479.2 266 85.0
CDE11G0205 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 5.3e-133 478.4 280 79.3
Lsat_1_v5_gn_6_9841 Lactuca sativa HOM05D005292 ORTHO05D006473 1.6e-132 476.9 304 76.6
AUR62017394 Chenopodium quinoa HOM05D005292 ORTHO05D006473 4.2e-130 468.8 402 60.4
HPP92_014608 Vanilla planifolia HOM05D005292 ORTHO05D006473 7.0e-125 451.4 316 70.6
Rhsim07G0101700 Rhododendron simsii HOM05D005292 ORTHO05D006473 9.8e-119 431.0 424 56.1
SEGI_16146 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 2.8e-118 429.5 346 60.4
Duzib205G1434 Durio zibethinus HOM05D005292 ORTHO05D006473 1.0e-115 421.0 373 62.5
Pp3c6_20320 Physcomitrium patens HOM05D005292 ORTHO05D006473 5.0e-115 418.7 279 68.1
Sabra03G0079600 Salix brachista HOM05D005292 ORTHO05D006473 5.0e-115 418.7 219 90.9
FvH4_5g00640 Fragaria vesca HOM05D005292 ORTHO05D006473 1.6e-113 413.7 310 71.3
SMO223G0031 Selaginella moellendorffii HOM05D005292 ORTHO05D006473 1.5e-111 407.1 274 67.2
Mapoly0066s0051 Marchantia polymorpha HOM05D005292 ORTHO05D006473 2.0e-111 406.8 313 63.6
AagrBONN_evm.TU.Sc2ySwM_368.248 Anthoceros agrestis HOM05D005292 ORTHO05D006473 2.3e-107 393.3 341 59.2
Oeu022319.3 Olea europaea HOM05D005292 ORTHO05D006473 3.2e-101 372.9 348 59.5
TAR629G1108 Trochodendron aralioides HOM05D005292 ORTHO05D006473 9.2e-101 371.3 183 94.5
Actinidia14462 Actinidia chinensis HOM05D005292 ORTHO05D006473 3.6e-97 359.4 372 55.1
Dinv37766 Davidia involucrata HOM05D005292 ORTHO05D006473 4.2e-77 292.7 231 68.4
Aa31LG11G5120 Aethionema arabicum HOM05D005292 ORTHO05D006473 1.7e-75 287.3 155 82.6
MD06G1074900 Malus domestica HOM05D005292 ORTHO05D006473 7.3e-74 282.0 147 87.1
MELO3C005579.2 Cucumis melo HOM05D005292 ORTHO05D006473 8.7e-51 205.3 166 69.3
Lsat_1_v5_gn_8_156781 Lactuca sativa HOM05D005292 ORTHO05D006473 8.2e-49 198.7 173 60.7
Lsat_1_v5_gn_8_88300 Lactuca sativa HOM05D005292 ORTHO05D006473 7.2e-45 185.7 238 45.0
Lsat_1_v5_gn_2_99060 Lactuca sativa HOM05D005292 ORTHO05D006473 3.9e-43 179.9 120 73.3
TAR636G3691 Trochodendron aralioides HOM05D005292 ORTHO05D006473 2.5e-42 177.2 133 69.2
Lsat_1_v5_gn_8_99640 Lactuca sativa HOM05D005292 ORTHO05D006473 4.2e-37 159.8 161 54.0
SEGI_25328 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 7.2e-37 159.1 94 70.2
Glyma.05G052200 Glycine max HOM05D005292 ORTHO05D006473 1.2e-31 141.7 138 58.7
SEGI_08273 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 5.0e-30 136.3 84 78.6
Cc08_g13200 Coffea canephora HOM05D005292 ORTHO05D006473 3.2e-29 133.7 66 89.4
CDE11G1060 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 5.1e-27 126.3 66 81.8
MD06G1074800 Malus domestica HOM05D005292 ORTHO05D006473 1.5e-26 124.8 72 86.1
SEGI_15988 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 3.5e-23 113.6 66 78.8
TWI81G0363 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 3.2e-21 107.1 71 74.6
Eucgr.C02046 Eucalyptus grandis HOM05D005292 ORTHO05D006473 1.7e-17 94.7 66 71.2
vmacro17465 Vaccinium macrocarpon HOM05D002883 ORTHO05D003116 2.7e-15 87.4 66 62.1
Peaxi162Scf00102g01237 Petunia axillaris HOM05D000023 ORTHO05D013611 1.3e-06 58.5 48 56.2


User provided reference genes

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