Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01004856001 Vitis vinifera HOM05D005879 ORTHO05D007432 4.0e-76 288.1 157 100.0
TAR381G0927 Trochodendron aralioides HOM05D005879 ORTHO05D007432 6.7e-39 164.5 148 60.8
Nn2g14007 Nelumbo nucifera HOM05D005879 ORTHO05D007432 9.7e-38 160.6 138 63.0
ClCG07G017360 Citrullus lanatus HOM05D005879 ORTHO05D007432 1.6e-35 153.3 132 67.4
PSO339G2019 Papaver somniferum HOM05D005879 ORTHO05D007432 3.5e-35 152.1 148 56.1
CsaV3_4G004590 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.5e-35 151.8 137 67.2
CsaV3_UNG120970 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.5e-35 151.8 137 67.2
CsaV3_UNG160200 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.5e-35 151.8 137 67.2
CsaV3_UNG223580 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.5e-35 151.8 137 67.2
PSO170G2230 Papaver somniferum HOM05D005879 ORTHO05D007432 1.0e-34 150.6 152 55.3
PSO801G0022 Papaver somniferum HOM05D005879 ORTHO05D007432 1.3e-34 150.2 148 54.7
Dinv21896 Davidia involucrata HOM05D005879 ORTHO05D007432 1.7e-34 149.8 138 59.4
Gohir.A11G202400 Gossypium hirsutum HOM05D005879 ORTHO05D007432 1.7e-34 149.8 134 66.4
MD05G1043000 Malus domestica HOM05D005879 ORTHO05D007432 2.9e-34 149.1 143 63.6
QL06p049237 Quercus lobata HOM05D005879 ORTHO05D007432 2.9e-34 149.1 138 63.0
MELO3C017607.2 Cucumis melo HOM05D005879 ORTHO05D007432 3.8e-34 148.7 137 66.4
FAN26G1261 Fragaria x ananassa HOM05D005879 ORTHO05D007432 3.8e-34 148.7 147 56.5
Prupe.6G188100 Prunus persica HOM05D005879 ORTHO05D007432 6.5e-34 147.9 142 62.0
FvH4_1g20700 Fragaria vesca HOM05D005879 ORTHO05D007432 3.2e-33 145.6 147 57.1
RcHm_v2.0_Chr2g0113151 Rosa chinensis HOM05D005879 ORTHO05D007432 9.4e-33 144.1 146 58.2
TWI77G0137 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 1.6e-32 143.3 137 62.8
Gohir.D11G220800 Gossypium hirsutum HOM05D005879 ORTHO05D007432 3.6e-32 142.1 134 64.2
THA.LOC104807688 Tarenaya hassleriana HOM05D005879 ORTHO05D007432 1.0e-31 140.6 149 59.1
Cfa017077 Carpinus fangiana HOM05D005879 ORTHO05D007432 1.8e-31 139.8 133 62.4
Gorai.007G237000 Gossypium raimondii HOM05D005879 ORTHO05D007432 6.7e-31 137.9 134 62.7
TWI81G0999 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 2.0e-30 136.3 133 62.4
Aqoxy3G00238 Aquilegia oxysepala HOM05D005879 ORTHO05D007432 3.3e-30 135.6 151 51.7
Sc05g0001510 Simmondsia chinensis HOM05D005879 ORTHO05D007432 3.3e-30 135.6 135 55.6
Cpa.g.sc615.1 Carica papaya HOM05D005879 ORTHO05D007432 9.7e-30 134.0 138 57.2
Solyc05g052840.1 Solanum lycopersicum HOM05D005879 ORTHO05D007432 6.3e-29 131.3 134 56.0
A03p65800 Brassica napus HOM05D005879 ORTHO05D007432 8.2e-29 131.0 147 55.1
BraA03t15633Z Brassica rapa HOM05D005879 ORTHO05D007432 8.2e-29 131.0 147 55.1
Haze_24910 Corylus avellana HOM05D005879 ORTHO05D007432 8.2e-29 131.0 123 62.6
Haze_24914 Corylus avellana HOM05D005879 ORTHO05D007432 8.2e-29 131.0 123 62.6
Lsat_1_v5_gn_8_137181 Lactuca sativa HOM05D005879 ORTHO05D007432 8.2e-29 131.0 144 52.1
CARHR246770 Cardamine hirsuta HOM05D005879 ORTHO05D007432 1.1e-28 130.6 137 58.4
Hma1.2p1_0308F.1_g120270 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 1.4e-28 130.2 126 59.5
Sopen05g031350 Solanum pennellii HOM05D005879 ORTHO05D007432 2.4e-28 129.4 148 52.0
AL7G12180 Arabidopsis lyrata HOM05D005879 ORTHO05D007432 4.1e-28 128.6 137 57.7
PGSC0003DMG400027189 Solanum tuberosum HOM05D005879 ORTHO05D007432 4.1e-28 128.6 148 52.0
Carub.0007s0187 Capsella rubella HOM05D005879 ORTHO05D007432 5.3e-28 128.3 151 52.3
Thhalv10025595m.g Eutrema salsugineum HOM05D005879 ORTHO05D007432 5.3e-28 128.3 141 57.4
BolC7t46692H Brassica oleracea HOM05D005879 ORTHO05D007432 7.0e-28 127.9 151 53.6
Manes.12G134100 Manihot esculenta HOM05D005879 ORTHO05D007432 1.2e-27 127.1 142 57.0
BcaNung02300 Brassica carinata HOM05D005879 ORTHO05D007432 2.0e-27 126.3 134 58.2
Sed0022481 Sechium edule HOM05D005879 ORTHO05D007432 2.7e-27 125.9 132 57.6
Potri.005G074700 Populus trichocarpa HOM05D005879 ORTHO05D007432 3.5e-27 125.6 137 53.3
Lalb_Chr06g0163471 Lupinus albus HOM05D005879 ORTHO05D007432 4.5e-27 125.2 143 53.1
CiPaw.03G142700 Carya illinoinensis HOM05D005879 ORTHO05D007432 5.9e-27 124.8 124 60.5
DCAR_003483 Daucus carota HOM05D005879 ORTHO05D007432 5.9e-27 124.8 130 52.3
C07p62780 Brassica napus HOM05D005879 ORTHO05D007432 7.7e-27 124.4 151 53.0
SEGI_41531 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 1.0e-26 124.0 133 53.4
Eucgr.B03900 Eucalyptus grandis HOM05D005879 ORTHO05D007432 1.3e-26 123.6 129 57.4
Ah.11g050680 Amaranthus hybridus HOM05D005879 ORTHO05D007432 2.2e-26 122.9 134 48.5
AT4G39920 Arabidopsis thaliana HOM05D005879 ORTHO05D007432 2.9e-26 122.5 137 55.5
COL.COLO4_27255 Corchorus olitorius HOM05D005879 ORTHO05D007432 2.9e-26 122.5 108 66.7
arahy.Tifrunner.gnm1.ann1.Y76I0L Arachis hypogaea HOM05D005879 ORTHO05D007432 3.8e-26 122.1 133 54.1
TPR.G6200 Trifolium pratense HOM05D005879 ORTHO05D007432 3.8e-26 122.1 132 55.3
Aa31LG6G15340 Aethionema arabicum HOM05D005879 ORTHO05D007432 5.0e-26 121.7 142 52.8
EL10Ac5g10569 Beta vulgaris HOM05D005879 ORTHO05D007432 5.0e-26 121.7 148 48.0
unitig_32.g10701 Utricularia gibba HOM05D005879 ORTHO05D007432 5.0e-26 121.7 126 55.6
Sabra05G0061500 Salix brachista HOM05D005879 ORTHO05D007432 6.5e-26 121.3 137 51.8
Sp7g35960 Schrenkiella parvula HOM05D005879 ORTHO05D007432 6.5e-26 121.3 142 53.5
Lj4g0026645 Lotus japonicus HOM05D005879 ORTHO05D007432 1.9e-25 119.8 132 56.1
Cc07_g15080 Coffea canephora HOM05D005879 ORTHO05D007432 2.5e-25 119.4 133 54.1
SGA_v2.0_scaffold334G49051 Striga asiatica HOM05D005879 ORTHO05D007432 3.2e-25 119.0 144 48.6
Migut.L00135 Erythranthe guttata HOM05D005879 ORTHO05D007432 4.2e-25 118.6 146 47.9
HanXRQChr17g0554861 Helianthus annuus HOM05D005879 ORTHO05D007432 4.2e-25 118.6 134 51.5
SGA_v2.0_scaffold115G32189 Striga asiatica HOM05D005879 ORTHO05D007432 4.2e-25 118.6 144 48.6
AUR62028624 Chenopodium quinoa HOM05D005879 ORTHO05D007432 7.2e-25 117.9 148 45.9
Ca_17743_v3 Cicer arietinum L. HOM05D005879 ORTHO05D007432 7.2e-25 117.9 132 54.5
vmacro12962 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 7.2e-25 117.9 152 50.0
arahy.Tifrunner.gnm1.ann1.F9QSZL Arachis hypogaea HOM05D005879 ORTHO05D007432 2.7e-24 115.9 133 52.6
AUR62008049 Chenopodium quinoa HOM05D005879 ORTHO05D007432 4.7e-24 115.2 148 45.3
C03p78540 Brassica napus HOM05D005879 ORTHO05D007432 8.0e-24 114.4 141 50.4
Nitab4.5_0009581g0010 Nicotiana tabacum HOM05D005879 ORTHO05D007432 1.0e-23 114.0 151 49.0
MSTRG.3773 Avicennia marina HOM05D005879 ORTHO05D007432 3.0e-23 112.5 129 48.8
Atru.chr7.1491 Acer truncatum HOM05D005879 ORTHO05D007432 4.0e-23 112.1 133 52.6
ATR0584G053 Amborella trichopoda HOM05D005879 ORTHO05D007432 4.0e-23 112.1 140 47.9
Ciclev10020973m.g Citrus clementina HOM05D005879 ORTHO05D007432 4.0e-23 112.1 144 51.4
Peaxi162Scf00054g00186 Petunia axillaris HOM05D005879 ORTHO05D007432 5.2e-23 111.7 134 48.5
Rhsim01G0133800 Rhododendron simsii HOM05D005879 ORTHO05D007432 5.2e-23 111.7 132 54.5
RhsimUnG0233600 Rhododendron simsii HOM05D005879 ORTHO05D007432 5.2e-23 111.7 132 54.5
ECA233G0618 Erigeron canadensis HOM05D005879 ORTHO05D007432 8.8e-23 110.9 134 50.0
CAN.G151.26 Capsicum annuum HOM05D005879 ORTHO05D007432 2.0e-22 109.8 134 49.3
Oeu032409.1 Olea europaea HOM05D005879 ORTHO05D007432 2.6e-22 109.4 128 51.6
Atru.chr7.1487 Acer truncatum HOM05D005879 ORTHO05D007432 5.7e-22 108.2 133 50.4
Medtr8g090180 Medicago truncatula HOM05D005879 ORTHO05D007432 2.8e-21 105.9 139 47.5
Glyma.08G134800 Glycine max HOM05D005879 ORTHO05D007432 6.3e-21 104.8 132 50.8
arahy.Tifrunner.gnm1.ann1.DH96WI Arachis hypogaea HOM05D005879 ORTHO05D007432 1.4e-20 103.6 130 48.5
CDE04G0616 Ceratophyllum demersum HOM05D005879 ORTHO05D007432 1.8e-20 103.2 139 43.2
MBI05_g37046_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 2.4e-20 102.8 139 46.0
BolC3t20106H Brassica oleracea HOM05D005879 ORTHO05D007432 5.4e-20 101.7 131 48.9
SalBow7G4497 Salvia bowleyana HOM05D005879 ORTHO05D007432 1.0e-18 97.4 120 48.3
VMungo0251G0721 Vigna mungo HOM05D005879 ORTHO05D007432 1.3e-18 97.1 132 47.0
HPP92_013925 Vanilla planifolia HOM05D005879 ORTHO05D007432 1.1e-17 94.0 120 47.5
HPP92_014012 Vanilla planifolia HOM05D005879 ORTHO05D007432 1.9e-17 93.2 120 47.5
Phvul.002G256800 Phaseolus vulgaris HOM05D005879 ORTHO05D007432 2.8e-16 89.4 132 43.9
Glyma.05G177800 Glycine max HOM05D005879 ORTHO05D007432 3.6e-16 89.0 128 46.9
FAN19G0980 Fragaria x ananassa HOM05D005879 ORTHO05D007432 2.3e-15 86.3 120 45.0
Thecc.01G100600 Theobroma cacao HOM05D005879 ORTHO05D007432 4.4e-14 82.0 149 40.9
vmacro17311 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 7.5e-14 81.3 59 67.8
Duzib147G1529 Durio zibethinus HOM05D005879 ORTHO05D007432 2.8e-13 79.3 147 38.8
Mapoly0002s0046 Marchantia polymorpha HOM05D005879 ORTHO05D007432 2.8e-13 79.3 129 39.5
Actinidia28237 Actinidia chinensis HOM05D005879 ORTHO05D007432 6.3e-13 78.2 93 55.9
SMO143G0283 Selaginella moellendorffii HOM05D005879 ORTHO05D007432 8.3e-13 77.8 121 35.5
Pp3c13_2250 Physcomitrium patens HOM05D005879 ORTHO05D007432 5.4e-12 75.1 146 36.3
PGR102G2441 Punica granatum HOM05D005879 ORTHO05D007432 7.8e-11 71.2 144 39.6
BcaC01g00330 Brassica carinata HOM05D005879 ORTHO05D007432 1.0e-10 70.9 154 37.7
Os02g0557000 Oryza sativa ssp. japonica HOM05D005879 ORTHO05D007432 3.3e-09 65.9 140 37.1
BcaB03g12293 Brassica carinata HOM05D005879 ORTHO05D007432 2.1e-08 63.2 42 69.0
MCO11G662 Micromonas commoda HOM05D005879 ORTHO05D007432 6.1e-08 61.6 145 31.7
Zm00001eb243870 Zea mays HOM05D005879 ORTHO05D007432 6.1e-08 61.6 131 35.1
AagrBONN_evm.TU.Sc2ySwM_117.1918 Anthoceros agrestis HOM05D005879 ORTHO05D007432 5.2e-07 58.5 132 31.1


User provided reference genes

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