Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 1.8e-104 382.5 182 100.0
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 1.8e-104 382.5 182 100.0
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 1.6e-87 326.2 181 85.1
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 1.8e-83 312.8 182 80.2
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 2.2e-81 305.8 181 77.9
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 5.9e-79 297.7 181 76.2
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 1.0e-78 297.0 181 76.2
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 1.3e-78 296.6 181 75.7
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 6.5e-78 294.3 183 78.1
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 2.5e-77 292.4 184 76.1
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 7.2e-77 290.8 181 77.3
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 4.7e-76 288.1 181 76.8
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 1.8e-75 286.2 181 75.7
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 1.8e-75 286.2 182 73.6
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 2.3e-75 285.8 182 75.8
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 3.0e-75 285.4 182 75.8
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 4.0e-75 285.0 182 74.7
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 5.2e-75 284.6 181 72.9
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 1.2e-74 283.5 185 76.2
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 2.0e-74 282.7 182 75.3
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 2.6e-74 282.3 182 73.1
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 5.7e-74 281.2 182 76.9
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 1.3e-73 280.0 183 77.6
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 6.3e-73 277.7 189 76.2
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 1.1e-72 276.9 183 73.2
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 9.1e-72 273.9 185 74.1
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.2e-71 273.5 186 74.7
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 2.0e-71 272.7 185 75.1
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.7e-71 272.3 185 74.1
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 7.7e-71 270.8 181 73.5
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 1.7e-70 269.6 184 74.5
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 2.2e-70 269.2 182 71.4
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 1.5e-69 266.5 171 74.3
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 3.2e-69 265.4 187 73.8
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 9.4e-69 263.8 185 70.8
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 2.7e-68 262.3 182 70.9
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 3.6e-68 261.9 181 70.2
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 2.3e-67 259.2 182 70.9
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 5.2e-67 258.1 184 68.5
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 8.8e-67 257.3 182 73.6
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 8.8e-67 257.3 182 73.6
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 1.2e-66 256.9 182 73.6
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 2.6e-66 255.8 179 73.2
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 2.6e-66 255.8 129 91.5
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 1.3e-65 253.4 182 70.9
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 1.4e-64 250.0 182 70.3
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 1.8e-64 249.6 182 68.7
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 2.4e-64 249.2 177 71.2
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 3.1e-64 248.8 184 70.1
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 4.1e-64 248.4 180 71.1
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 7.0e-64 247.7 177 70.1
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 3.5e-63 245.4 182 65.9
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 3.5e-63 245.4 182 66.5
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 5.9e-63 244.6 185 67.6
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 7.7e-63 244.2 184 69.6
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 1.7e-62 243.0 189 67.2
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 1.7e-62 243.0 189 67.2
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 5.0e-62 241.5 182 68.1
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 1.1e-61 240.4 148 77.7
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 4.3e-61 238.4 181 63.5
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 7.3e-61 237.7 182 65.4
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 1.6e-60 236.5 182 64.3
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 2.8e-60 235.7 182 63.2
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 3.6e-60 235.3 182 62.6
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 4.7e-60 235.0 181 64.6
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 6.1e-60 234.6 128 85.2
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 6.1e-60 234.6 182 63.2
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 6.8e-59 231.1 145 78.6
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 1.2e-58 230.3 150 74.7
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 3.4e-58 228.8 168 65.5
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 1.7e-57 226.5 187 61.5
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 3.7e-57 225.3 182 64.8
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 6.4e-57 224.6 181 63.5
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 8.3e-57 224.2 181 64.1
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 1.2e-55 220.3 181 60.8
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 1.6e-55 219.9 191 61.8
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 1.1e-53 213.8 111 90.1
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 5.6e-53 211.5 189 58.7
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 1.2e-52 210.3 182 59.9
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 1.6e-52 209.9 135 71.1
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 8.0e-52 207.6 189 58.2
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 8.0e-52 207.6 189 58.2
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 2.3e-51 206.1 187 60.4
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 2.3e-51 206.1 187 59.9
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 3.1e-51 205.7 145 69.0
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 5.2e-51 204.9 149 67.8
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 8.9e-51 204.1 128 76.6
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 8.9e-51 204.1 128 76.6
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 8.9e-51 204.1 128 76.6
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 8.9e-51 204.1 128 76.6
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 1.2e-50 203.8 187 59.9
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 1.2e-50 203.8 128 76.6
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 2.6e-50 202.6 146 67.8
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 2.6e-50 202.6 146 67.8
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 2.6e-50 202.6 128 75.8
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 4.4e-50 201.8 128 75.8
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 8.3e-49 197.6 145 68.3
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 8.6e-46 187.6 118 71.2
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 3.3e-45 185.7 185 57.8
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 9.8e-42 174.1 138 60.1
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 2.7e-39 166.0 145 57.9
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 1.5e-37 160.2 115 64.3
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 1.5e-37 160.2 124 66.1
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 4.3e-37 158.7 175 50.9
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 4.9e-33 145.2 110 61.8
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 9.2e-32 141.0 149 51.7
Manes.06G090801 Manihot esculenta HOM05D007067 ORTHO05D008864 2.6e-26 122.9 112 57.1
Haze_07309 Corylus avellana HOM05D007067 ORTHO05D008864 1.1e-24 117.5 181 42.5
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 9.6e-21 104.4 100 47.0
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 3.6e-20 102.4 94 51.1
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 8.1e-20 101.3 158 39.2
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 1.6e-15 87.0 100 49.0
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 1.2e-10 70.9 52 76.9
Rhsim08G0168600 Rhododendron simsii HOM05D000306 ORTHO05D023263 7.1e-08 61.6 180 30.0


User provided reference genes

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