Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 6.0e-155 550.8 280 100.0
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.5e-153 546.2 280 99.3
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 9.5e-52 208.0 198 59.1
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 3.4e-49 199.5 205 55.6
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 4.4e-49 199.1 197 56.9
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 9.8e-49 198.0 195 57.9
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 3.7e-48 196.1 197 56.9
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 1.2e-46 191.0 197 57.9
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 1.6e-46 190.7 191 55.0
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 5.9e-46 188.7 197 57.4
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 7.8e-46 188.3 154 65.6
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.0e-45 188.0 199 55.8
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.0e-45 188.0 199 55.8
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 5.0e-45 185.7 192 56.2
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 6.6e-45 185.3 209 52.2
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 1.1e-44 184.5 193 54.9
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 1.9e-44 183.7 195 53.8
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 9.5e-44 181.4 195 53.3
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 4.7e-43 179.1 179 55.9
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 4.7e-43 179.1 214 50.0
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 8.0e-43 178.3 182 54.4
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 1.0e-42 177.9 186 57.0
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 1.8e-42 177.2 184 55.4
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.8e-42 177.2 120 75.0
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 2.3e-42 176.8 122 72.1
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 2.3e-42 176.8 120 71.7
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 2.3e-42 176.8 193 55.4
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 3.1e-42 176.4 195 53.3
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 3.1e-42 176.4 192 54.2
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 6.8e-42 175.3 185 57.8
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 6.8e-42 175.3 204 52.9
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.2e-41 174.5 122 71.3
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 2.0e-41 173.7 204 53.4
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 2.6e-41 173.3 199 52.3
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.6e-41 173.3 197 55.3
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 7.5e-41 171.8 194 54.1
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 2.2e-40 170.2 201 55.2
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 2.9e-40 169.9 206 51.9
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 3.7e-40 169.5 195 52.8
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 6.4e-40 168.7 206 52.4
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 6.4e-40 168.7 178 56.7
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 1.4e-39 167.5 214 46.3
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 1.4e-39 167.5 163 55.2
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 4.1e-39 166.0 199 53.8
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 7.0e-39 165.2 185 51.9
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 1.6e-38 164.1 122 70.5
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 3.5e-38 162.9 173 54.3
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 4.6e-38 162.5 192 50.5
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 6.0e-38 162.2 128 66.4
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.0e-37 161.4 162 51.9
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 1.3e-37 161.0 198 50.5
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 1.3e-37 161.0 189 51.9
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.7e-37 160.6 193 49.7
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 2.3e-37 160.2 193 49.7
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 2.3e-37 160.2 139 64.7
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 3.9e-37 159.5 192 52.6
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 5.0e-37 159.1 198 50.5
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 6.6e-37 158.7 192 52.6
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 8.6e-37 158.3 109 73.4
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 2.5e-36 156.8 193 50.8
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 3.3e-36 156.4 133 63.9
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 9.5e-36 154.8 169 55.0
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 1.6e-35 154.1 132 63.6
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 1.6e-35 154.1 193 49.2
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 3.6e-35 152.9 132 63.6
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 3.6e-35 152.9 201 48.8
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 4.7e-35 152.5 184 51.1
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 8.1e-35 151.8 100 75.0
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 1.4e-34 151.0 193 48.7
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 2.3e-34 150.2 175 49.1
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 2.3e-34 150.2 108 70.4
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 2.3e-34 150.2 97 77.3
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 3.1e-34 149.8 108 68.5
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 3.1e-34 149.8 108 68.5
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 4.0e-34 149.4 105 72.4
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 5.2e-34 149.1 108 72.2
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 5.2e-34 149.1 108 72.2
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 8.9e-34 148.3 108 71.3
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 1.5e-33 147.5 105 72.4
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 3.4e-33 146.4 191 48.2
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.7e-32 144.1 112 66.1
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 1.1e-31 141.4 95 72.6
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 1.1e-31 141.4 94 71.3
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 1.9e-31 140.6 196 43.4
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 4.1e-31 139.4 101 70.3
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 1.6e-30 137.5 206 46.6
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 7.8e-30 135.2 156 50.6
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 2.3e-29 133.7 96 68.8
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 5.1e-29 132.5 108 56.5
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 2.5e-28 130.2 142 53.5
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 4.7e-27 125.9 180 44.4
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 7.6e-25 118.6 104 56.7
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 1.3e-24 117.9 104 57.7
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 2.4e-23 113.6 83 71.1
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 3.2e-23 113.2 72 79.2
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 1.2e-22 111.3 106 50.0
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 6.0e-22 109.0 103 57.3
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 1.0e-21 108.2 83 53.0
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 2.3e-21 107.1 100 56.0
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 3.9e-21 106.3 91 60.4
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 1.5e-20 104.4 115 49.6
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 1.1e-18 98.2 107 47.7
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 3.4e-17 93.2 84 52.4
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 4.4e-17 92.8 61 70.5
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 3.1e-10 70.1 97 47.4
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 5.8e-09 65.9 43 72.1
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 2.9e-08 63.5 96 41.7


User provided reference genes

Program Settings