Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 5.1e-37 157.5 98 100.0
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 6.7e-37 157.1 98 99.0
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 2.0e-25 119.0 98 65.3
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 2.6e-25 118.6 98 67.3
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 2.9e-24 115.2 98 66.3
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 3.8e-24 114.8 99 63.6
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 5.0e-24 114.4 98 65.3
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 6.5e-24 114.0 98 63.3
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 2.5e-23 112.1 98 61.2
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 2.5e-23 112.1 97 62.9
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 9.4e-23 110.2 101 69.3
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 1.2e-22 109.8 98 62.2
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 2.7e-22 108.6 94 67.0
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 6.1e-22 107.5 98 61.2
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 6.1e-22 107.5 101 68.3
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 8.0e-22 107.1 92 62.0
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 1.0e-21 106.7 101 70.3
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 1.4e-21 106.3 98 59.2
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 5.2e-21 104.4 96 62.5
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 6.7e-21 104.0 98 59.2
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 8.8e-21 103.6 98 56.1
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 8.8e-21 103.6 94 68.1
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 2.0e-20 102.4 96 59.4
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 2.0e-20 102.4 98 58.2
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 2.6e-20 102.1 98 58.2
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 2.6e-20 102.1 96 59.4
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 4.4e-20 101.3 98 55.1
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 4.4e-20 101.3 96 60.4
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 5.7e-20 100.9 97 64.9
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 7.4e-20 100.5 98 67.3
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 7.4e-20 100.5 96 60.4
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 9.7e-20 100.1 98 57.1
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 1.3e-19 99.8 98 54.1
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 1.3e-19 99.8 97 56.7
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 2.2e-19 99.0 95 58.9
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 2.2e-19 99.0 96 57.3
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 3.7e-19 98.2 97 61.9
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 6.3e-19 97.4 94 56.4
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 8.2e-19 97.1 98 55.1
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 1.4e-18 96.3 91 56.0
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 1.4e-18 96.3 98 54.1
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 1.4e-18 96.3 98 57.1
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 1.4e-18 96.3 98 57.1
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 1.4e-18 96.3 98 69.4
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 5.3e-18 94.4 100 53.0
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 5.3e-18 94.4 94 64.9
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 5.3e-18 94.4 104 51.9
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 9.1e-18 93.6 98 53.1
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 1.2e-17 93.2 98 52.0
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 1.2e-17 93.2 98 55.1
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 1.2e-17 93.2 97 53.6
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 1.6e-17 92.8 94 60.6
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.0e-17 92.4 97 54.6
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 2.6e-17 92.0 100 55.0
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 4.5e-17 91.3 97 61.9
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 5.9e-17 90.9 94 53.2
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.3e-16 89.7 97 59.8
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 1.7e-16 89.4 102 63.7
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 3.8e-16 88.2 98 53.1
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 5.0e-16 87.8 94 60.6
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 5.0e-16 87.8 98 62.2
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 8.5e-16 87.0 99 50.5
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.1e-15 86.7 97 61.9
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 1.5e-15 86.3 94 62.8
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 1.5e-15 86.3 93 53.8
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 1.9e-15 85.9 55 80.0
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 2.5e-15 85.5 95 61.1
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 2.5e-15 85.5 98 48.0
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 3.2e-15 85.1 98 48.0
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 4.2e-15 84.7 99 56.6
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 5.5e-15 84.3 97 61.9
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 9.4e-15 83.6 98 49.0
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 1.2e-14 83.2 100 59.0
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 1.6e-14 82.8 98 48.0
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 1.0e-13 80.1 98 49.0
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 1.8e-13 79.3 96 61.5
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 1.8e-13 79.3 80 57.5
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 3.0e-13 78.6 96 51.0
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 3.0e-13 78.6 101 49.5
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 8.8e-13 77.0 80 53.8
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 3.4e-12 75.1 92 44.6
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 4.4e-12 74.7 97 47.4
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 4.4e-12 74.7 92 42.4
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 9.8e-12 73.6 96 44.8
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 4.8e-11 71.2 98 57.1
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 1.1e-10 70.1 95 42.1
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 1.8e-10 69.3 98 58.2
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 3.1e-10 68.6 96 42.7
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 3.1e-10 68.6 96 42.7
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 3.1e-10 68.6 95 42.1
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 3.1e-10 68.6 95 42.1
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 7.0e-10 67.4 91 42.9
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 7.0e-10 67.4 95 61.1
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 9.1e-10 67.0 96 41.7
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 9.1e-10 67.0 50 64.0
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 1.2e-09 66.6 95 41.1
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 1.2e-09 66.6 96 41.7
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 2.0e-09 65.9 95 40.0
CDE01G0251 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 2.0e-09 65.9 71 47.9
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 2.7e-09 65.5 89 44.9
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 3.5e-09 65.1 88 53.4
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 3.5e-09 65.1 88 53.4
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 4.5e-09 64.7 98 57.1
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 6.5e-08 60.8 88 42.0
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 7.2e-07 57.4 88 48.9
ATR0800G049 Amborella trichopoda HOM05D006676 ORTHO05D008394 2.1e-06 55.8 84 41.7
BcaB03g12363 Brassica carinata HOM05D006676 ORTHO05D008394 2.1e-06 55.8 54 50.0
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 2.1e-06 55.8 54 50.0
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 3.6e-06 55.1 88 46.6


User provided reference genes

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