Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01004517001 Vitis vinifera HOM05D005165 ORTHO05D006361 2.0e-267 925.6 628 100.0
Cfa000241 Carpinus fangiana HOM05D005165 ORTHO05D006361 6.4e-141 505.4 661 50.2
QL05p073800 Quercus lobata HOM05D005165 ORTHO05D006361 3.5e-139 499.6 647 57.2
Actinidia05522 Actinidia chinensis HOM05D005165 ORTHO05D006361 4.6e-139 499.2 675 51.4
Haze_06780 Corylus avellana HOM05D005165 ORTHO05D006361 1.6e-131 474.2 698 46.3
CSS0001066 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 1.5e-126 457.6 343 74.1
Nn1g03565 Nelumbo nucifera HOM05D005165 ORTHO05D006361 1.0e-122 444.9 628 45.5
Dinv13878 Davidia involucrata HOM05D005165 ORTHO05D006361 5.1e-122 442.6 706 44.6
Potri.004G017500 Populus trichocarpa HOM05D005165 ORTHO05D006361 1.1e-121 441.4 413 60.8
vmacro03694 Vaccinium macrocarpon HOM05D005165 ORTHO05D006361 2.8e-120 436.8 669 45.0
Ciclev10014034m.g Citrus clementina HOM05D005165 ORTHO05D006361 5.9e-118 429.1 625 48.2
CSS0020297 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 1.1e-116 424.9 318 73.9
TAR627G0931 Trochodendron aralioides HOM05D005165 ORTHO05D006361 1.9e-116 424.1 629 52.0
Sabra04G0009600 Salix brachista HOM05D005165 ORTHO05D006361 2.7e-115 420.2 427 58.1
Prupe.4G023200 Prunus persica HOM05D005165 ORTHO05D006361 1.4e-114 417.9 627 51.0
CiPaw.09G090000 Carya illinoinensis HOM05D005165 ORTHO05D006361 4.3e-113 412.9 420 57.1
CSS0012929 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 1.8e-111 407.5 422 60.0
Duzib235G1549 Durio zibethinus HOM05D005165 ORTHO05D006361 2.4e-111 407.1 626 51.4
Thecc.06G218200 Theobroma cacao HOM05D005165 ORTHO05D006361 4.1e-111 406.4 628 52.4
Lj2C270G14 Lonicera japonica HOM05D005165 ORTHO05D006361 3.4e-110 403.3 414 59.4
FAN21G2432 Fragaria x ananassa HOM05D005165 ORTHO05D006361 7.2e-108 395.6 423 58.6
Rhsim13G0155600 Rhododendron simsii HOM05D005165 ORTHO05D006361 7.2e-108 395.6 366 60.9
Cc09_g01850 Coffea canephora HOM05D005165 ORTHO05D006361 4.4e-105 386.3 628 47.5
MBI02_g22104_MAGBIO Magnolia biondii HOM05D005165 ORTHO05D006361 6.3e-104 382.5 654 52.6
Gorai.011G015400 Gossypium raimondii HOM05D005165 ORTHO05D006361 1.2e-102 378.3 408 59.1
Sed0027912 Sechium edule HOM05D005165 ORTHO05D006361 2.0e-102 377.5 303 71.9
ClCG03G004830 Citrullus lanatus HOM05D005165 ORTHO05D006361 3.5e-102 376.7 310 70.6
Lj4g0017916 Lotus japonicus HOM05D005165 ORTHO05D006361 2.2e-101 374.0 631 45.8
COL.COLO4_31753 Corchorus olitorius HOM05D005165 ORTHO05D006361 2.9e-101 373.6 311 69.8
PSO675G7058 Papaver somniferum HOM05D005165 ORTHO05D006361 6.5e-101 372.5 313 69.0
PSO541G6479 Papaver somniferum HOM05D005165 ORTHO05D006361 8.5e-101 372.1 313 69.0
MD10G1319300 Malus domestica HOM05D005165 ORTHO05D006361 2.5e-100 370.5 420 51.4
CsaV3_1G010870 Cucumis sativus L. HOM05D005165 ORTHO05D006361 3.2e-100 370.2 307 70.7
RcHm_v2.0_Chr5g0003561 Rosa chinensis HOM05D005165 ORTHO05D006361 3.6e-99 366.7 728 40.2
Medtr4g131940 Medicago truncatula HOM05D005165 ORTHO05D006361 4.7e-99 366.3 349 61.3
Gohir.A10G013700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 6.1e-99 365.9 309 67.0
FvH4_3g02340 Fragaria vesca HOM05D005165 ORTHO05D006361 1.4e-98 364.8 313 68.7
CANSAT56G1527 Cannabis sativa HOM05D005165 ORTHO05D006361 1.8e-98 364.4 306 68.3
MSTRG.15979 Avicennia marina HOM05D005165 ORTHO05D006361 3.0e-98 363.6 330 63.9
Hund23483 Selenicereus undatus HOM05D005165 ORTHO05D006361 3.9e-98 363.2 325 60.6
Glyma.17G014900 Glycine max HOM05D005165 ORTHO05D006361 5.7e-97 359.4 715 41.0
Gohir.D10G013600 Gossypium hirsutum HOM05D005165 ORTHO05D006361 5.7e-97 359.4 310 66.5
TPR.G37081 Trifolium pratense HOM05D005165 ORTHO05D006361 1.3e-96 358.2 349 59.0
Oeu063907.1 Olea europaea HOM05D005165 ORTHO05D006361 2.2e-96 357.5 341 59.2
arahy.Tifrunner.gnm1.ann1.FU33AK Arachis hypogaea HOM05D005165 ORTHO05D006361 2.8e-96 357.1 361 59.3
arahy.Tifrunner.gnm1.ann1.K6JFDD Arachis hypogaea HOM05D005165 ORTHO05D006361 3.7e-96 356.7 361 58.7
arahy.Tifrunner.gnm1.ann1.QZ1TNI Arachis hypogaea HOM05D005165 ORTHO05D006361 6.3e-96 355.9 721 37.4
TWI63G0677 Tripterygium wilfordii HOM05D005165 ORTHO05D006361 6.3e-96 355.9 706 41.6
Cpa.g.sc198.37 Carica papaya HOM05D005165 ORTHO05D006361 8.2e-96 355.5 623 42.2
Glyma.07G259400 Glycine max HOM05D005165 ORTHO05D006361 8.2e-96 355.5 714 40.6
Ca_21091_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 3.1e-95 353.6 349 58.7
Ca_30199_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 3.1e-95 353.6 349 58.7
Psat4g007280 Pisum sativum HOM05D005165 ORTHO05D006361 7.0e-95 352.4 720 37.5
Aqoxy1G03259 Aquilegia oxysepala HOM05D005165 ORTHO05D006361 1.6e-94 351.3 309 63.8
Manes.17G037700 Manihot esculenta HOM05D005165 ORTHO05D006361 2.0e-94 350.9 307 62.2
Nitab4.5_0007482g0050 Nicotiana tabacum HOM05D005165 ORTHO05D006361 4.5e-94 349.7 630 42.4
Sp7g19990 Schrenkiella parvula HOM05D005165 ORTHO05D006361 5.9e-94 349.4 341 59.2
HanXRQChr05g0129591 Helianthus annuus HOM05D005165 ORTHO05D006361 7.7e-94 349.0 350 54.3
DCAR_004209 Daucus carota HOM05D005165 ORTHO05D006361 1.3e-93 348.2 284 66.2
Atru.chr10.2199 Acer truncatum HOM05D005165 ORTHO05D006361 1.7e-93 347.8 661 44.5
Thhalv10024235m.g Eutrema salsugineum HOM05D005165 ORTHO05D006361 5.0e-93 346.3 317 61.5
FAN21G3214 Fragaria x ananassa HOM05D005165 ORTHO05D006361 5.0e-93 346.3 332 64.2
VMungo1215G1456 Vigna mungo HOM05D005165 ORTHO05D000002 8.5e-93 345.5 721 41.3
PGR004G2872 Punica granatum HOM05D005165 ORTHO05D006361 2.5e-92 344.0 310 67.1
Sc17g0007260 Simmondsia chinensis HOM05D005165 ORTHO05D006361 9.4e-92 342.0 316 61.7
MELO3C002466.2 Cucumis melo HOM05D005165 ORTHO05D006361 3.6e-91 340.1 362 55.8
FAN25G1001 Fragaria x ananassa HOM05D005165 ORTHO05D006361 4.7e-91 339.7 360 59.7
Phvul.003G077600 Phaseolus vulgaris HOM05D005165 ORTHO05D006361 4.7e-91 339.7 722 36.3
AT4G21820 Arabidopsis thaliana HOM05D005165 ORTHO05D006361 6.1e-91 339.3 326 60.4
Lsat_1_v5_gn_7_17640 Lactuca sativa HOM05D005165 ORTHO05D006361 1.8e-90 337.8 350 54.0
Aa31LG6G3830 Aethionema arabicum HOM05D005165 ORTHO05D006361 3.0e-90 337.0 322 59.3
BcaC09g51197 Brassica carinata HOM05D005165 ORTHO05D006361 8.8e-90 335.5 342 56.7
C01p15840 Brassica napus HOM05D005165 ORTHO05D006361 8.8e-90 335.5 342 56.7
Eucgr.D01308 Eucalyptus grandis HOM05D005165 ORTHO05D006361 1.2e-89 335.1 282 63.8
BolC1t01538H Brassica oleracea HOM05D005165 ORTHO05D006361 1.5e-89 334.7 342 56.7
Lalb_Chr01g0014921 Lupinus albus HOM05D005165 ORTHO05D006361 3.4e-89 333.6 698 38.0
Nitab4.5_0003254g0110 Nicotiana tabacum HOM05D005165 ORTHO05D006361 1.7e-88 331.3 312 63.1
Carub.0007s1958 Capsella rubella HOM05D005165 ORTHO05D006361 3.1e-87 327.0 312 60.3
SGA_v2.0_scaffold4G01924 Striga asiatica HOM05D005165 ORTHO05D006361 1.3e-85 321.6 303 62.0
Migut.M01303 Erythranthe guttata HOM05D005165 ORTHO05D006361 1.7e-85 321.2 310 61.9
A01p13150 Brassica napus HOM05D005165 ORTHO05D006361 1.1e-84 318.5 303 60.7
BraA01t01259Z Brassica rapa HOM05D005165 ORTHO05D006361 1.1e-84 318.5 303 60.7
AUR62012682 Chenopodium quinoa HOM05D005165 ORTHO05D006361 1.1e-84 318.5 307 56.4
BcaNung02250 Brassica carinata HOM05D005165 ORTHO05D006361 2.5e-84 317.4 312 55.4
THA.LOC104813036 Tarenaya hassleriana HOM05D005165 ORTHO05D006361 2.5e-84 317.4 303 60.1
Ah.09g235020 Amaranthus hybridus HOM05D005165 ORTHO05D006361 3.2e-84 317.0 314 58.9
CARHR228530 Cardamine hirsuta HOM05D005165 ORTHO05D006361 3.2e-84 317.0 342 55.8
AUR62021974 Chenopodium quinoa HOM05D005165 ORTHO05D006361 6.1e-83 312.8 307 55.7
Peaxi162Scf00262g00611 Petunia axillaris HOM05D005165 ORTHO05D006361 1.7e-80 304.7 400 47.2
Gohir.D06G153700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 1.6e-78 298.1 358 52.8
Gorai.010G179700 Gossypium raimondii HOM05D005165 ORTHO05D006361 6.6e-77 292.7 358 52.2
GSVIVG01002955001 Vitis vinifera HOM05D005165 ORTHO05D006361 8.6e-77 292.4 156 98.7
CSS0021361 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 9.5e-76 288.9 236 68.2
unitig_748.g7100 Utricularia gibba HOM05D005165 ORTHO05D006361 4.7e-75 286.6 318 56.0
Sopen02g025090 Solanum pennellii HOM05D005165 ORTHO05D006361 1.7e-72 278.1 448 41.3
ECA236G1313 Erigeron canadensis HOM05D005165 ORTHO05D006361 9.2e-71 272.3 259 58.3
PGSC0003DMG400016486 Solanum tuberosum HOM05D005165 ORTHO05D006361 1.1e-68 265.4 427 41.0
EL10Ac8g20027 Beta vulgaris HOM05D005165 ORTHO05D006361 5.6e-68 263.1 326 48.8
QL05p073557 Quercus lobata HOM05D005165 ORTHO05D006361 1.2e-59 235.3 164 73.8
CDE05G2160 Ceratophyllum demersum HOM05D005165 ORTHO05D006361 5.8e-57 226.5 430 36.3
SEGI_17063 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 9.5e-52 209.1 336 41.7
ATR0752G007 Amborella trichopoda HOM05D005165 ORTHO05D006361 2.0e-49 201.4 237 54.9
Zm00001eb322760 Zea mays HOM05D005165 ORTHO05D006361 3.7e-48 197.2 430 33.3
Solyc02g080400.3 Solanum lycopersicum HOM05D005165 ORTHO05D006361 2.1e-46 191.4 153 68.0
CAN.G569.18 Capsicum annuum HOM05D005165 ORTHO05D006361 1.1e-44 185.7 127 75.6
AagrBONN_evm.TU.Sc2ySwM_117.1637__1638 Anthoceros agrestis HOM05D005165 ORTHO05D006361 1.6e-38 165.2 321 36.1
SGA_v2.0_scaffold186G40236 Striga asiatica HOM05D005165 ORTHO05D006361 3.0e-37 161.0 151 60.3
HPP92_012397 Vanilla planifolia HOM05D005165 ORTHO05D006361 1.6e-35 155.2 436 32.1
SMO200G0122 Selaginella moellendorffii HOM05D005165 ORTHO05D006361 3.6e-35 154.1 277 35.7
Pp3c24_1350 Physcomitrium patens HOM05D005165 ORTHO05D006361 1.7e-32 145.2 325 35.1
AL7G32100 Arabidopsis lyrata HOM05D005165 ORTHO05D006361 4.2e-31 140.6 97 70.1
Mapoly0043s0047 Marchantia polymorpha HOM05D005165 ORTHO05D006361 7.9e-30 136.3 203 39.4
HPP92_012318 Vanilla planifolia HOM05D005165 ORTHO05D006361 7.9e-30 136.3 411 30.2
AL7G32110 Arabidopsis lyrata HOM05D005165 ORTHO05D006361 3.3e-28 131.0 169 53.3
GSVIVG01002377001 Vitis vinifera HOM05D005165 ORTHO05D006361 2.4e-18 98.2 57 82.5
SEGI_30095 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 9.0e-18 96.3 188 37.8
CBR_g12408 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-17 95.5 223 30.5
Os07g0517400 Oryza sativa ssp. japonica HOM05D005165 ORTHO05D006361 1.6e-14 85.5 116 44.8
Solyc02g080390.2 Solanum lycopersicum HOM05D005165 ORTHO05D006361 6.7e-13 80.1 92 46.7
vmacro07283 Vaccinium macrocarpon HOM05D000340 ORTHO05D012132 1.3e-08 65.9 86 43.0
SEGI_29404 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 1.1e-07 62.8 161 32.3


User provided reference genes

Program Settings