Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01004442001 Vitis vinifera HOM05D004142 ORTHO05D005411 2.7e-74 282.0 146 100.0
GSVIVG01004114001 Vitis vinifera HOM05D004142 ORTHO05D005411 7.8e-74 280.4 145 100.0
Dinv14174 Davidia involucrata HOM05D004142 ORTHO05D005411 2.4e-54 215.7 152 75.7
Cpa.g.sc60.19 Carica papaya HOM05D004142 ORTHO05D005411 9.6e-48 193.7 157 64.3
Lj5C171T17 Lonicera japonica HOM05D004142 ORTHO05D005411 3.7e-47 191.8 155 68.4
PGR042G3440 Punica granatum HOM05D004142 ORTHO05D005411 3.7e-47 191.8 143 69.9
SGA_v2.0_scaffold98G29302 Striga asiatica HOM05D004142 ORTHO05D005411 6.2e-47 191.0 156 64.7
TWI75G0433 Tripterygium wilfordii HOM05D004142 ORTHO05D005411 1.4e-46 189.9 153 67.3
Aqoxy6G01597 Aquilegia oxysepala HOM05D004142 ORTHO05D005411 3.1e-46 188.7 154 62.3
MD10G1141700 Malus domestica HOM05D004142 ORTHO05D005411 4.0e-46 188.3 154 64.9
Oeu037462.1 Olea europaea HOM05D004142 ORTHO05D005411 4.0e-46 188.3 146 67.1
Prupe.8G180000 Prunus persica HOM05D004142 ORTHO05D005411 5.3e-46 188.0 154 66.9
RcHm_v2.0_Chr6g0280901 Rosa chinensis HOM05D004142 ORTHO05D005411 6.9e-46 187.6 152 63.2
CANSAT25G0210 Cannabis sativa HOM05D004142 ORTHO05D005411 9.0e-46 187.2 153 64.7
TWI31G1182 Tripterygium wilfordii HOM05D004142 ORTHO05D005411 9.0e-46 187.2 152 64.5
TAR633G0693 Trochodendron aralioides HOM05D004142 ORTHO05D005411 9.0e-46 187.2 155 64.5
CSS0035317 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 1.2e-45 186.8 152 67.1
ClCG02G003400 Citrullus lanatus HOM05D004142 ORTHO05D005411 1.2e-45 186.8 145 66.9
TAR318G0001 Trochodendron aralioides HOM05D004142 ORTHO05D005411 3.4e-45 185.3 154 64.3
MELO3C013248.2 Cucumis melo HOM05D004142 ORTHO05D005411 5.8e-45 184.5 149 65.1
Eucgr.H04975 Eucalyptus grandis HOM05D004142 ORTHO05D005411 5.8e-45 184.5 151 63.6
FAN24G0393 Fragaria x ananassa HOM05D004142 ORTHO05D005411 5.8e-45 184.5 151 63.6
Hund06363 Selenicereus undatus HOM05D004142 ORTHO05D005411 5.8e-45 184.5 147 66.0
CARHR293590 Cardamine hirsuta HOM05D004142 ORTHO05D005411 1.0e-44 183.7 162 59.3
Eucgr.G01885 Eucalyptus grandis HOM05D004142 ORTHO05D005411 1.7e-44 183.0 151 62.9
FvH4_2g16780 Fragaria vesca HOM05D004142 ORTHO05D005411 1.7e-44 183.0 151 63.6
CsaV3_7G001920 Cucumis sativus L. HOM05D004142 ORTHO05D005411 2.9e-44 182.2 138 67.4
FAN15G2670 Fragaria x ananassa HOM05D004142 ORTHO05D005411 2.9e-44 182.2 153 62.1
Nn5g31006 Nelumbo nucifera HOM05D004142 ORTHO05D005411 2.9e-44 182.2 155 61.3
THA.LOC104819692 Tarenaya hassleriana HOM05D004142 ORTHO05D005411 2.9e-44 182.2 165 58.8
COL.COLO4_34310 Corchorus olitorius HOM05D004142 ORTHO05D005411 3.8e-44 181.8 155 63.2
Duzib052G0377 Durio zibethinus HOM05D004142 ORTHO05D005411 4.9e-44 181.4 156 61.5
Sed0023655 Sechium edule HOM05D004142 ORTHO05D005411 4.9e-44 181.4 157 61.8
CSS0014725 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 6.5e-44 181.0 156 64.7
AT2G17250 Arabidopsis thaliana HOM05D004142 ORTHO05D005411 8.4e-44 180.6 151 60.9
Carub.0003s3119 Capsella rubella HOM05D004142 ORTHO05D005411 1.1e-43 180.3 156 60.3
Manes.04G066800 Manihot esculenta HOM05D004142 ORTHO05D005411 1.1e-43 180.3 147 62.6
Actinidia17993 Actinidia chinensis HOM05D004142 ORTHO05D005411 1.4e-43 179.9 154 65.6
AL3G50110 Arabidopsis lyrata HOM05D004142 ORTHO05D005411 1.4e-43 179.9 156 59.0
Solyc10g074560.2 Solanum lycopersicum HOM05D004142 ORTHO05D005411 1.4e-43 179.9 154 61.7
Thecc.02G146100 Theobroma cacao HOM05D004142 ORTHO05D005411 1.4e-43 179.9 156 62.2
Thhalv10022610m.g Eutrema salsugineum HOM05D004142 ORTHO05D005411 3.2e-43 178.7 169 56.2
Sopen10g027050 Solanum pennellii HOM05D004142 ORTHO05D005411 3.2e-43 178.7 154 61.0
Actinidia20577 Actinidia chinensis HOM05D004142 ORTHO05D005411 4.2e-43 178.3 156 64.1
CSS0002990 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 7.1e-43 177.6 158 63.3
CAN.G765.24 Capsicum annuum HOM05D004142 ORTHO05D005411 9.3e-43 177.2 144 65.3
Atru.chr3.3247 Acer truncatum HOM05D004142 ORTHO05D005411 1.2e-42 176.8 156 60.9
BcaC04g22983 Brassica carinata HOM05D004142 ORTHO05D005411 1.2e-42 176.8 173 54.9
C09p13280 Brassica napus HOM05D004142 ORTHO05D005411 1.6e-42 176.4 173 54.3
BolC9t54221H Brassica oleracea HOM05D004142 ORTHO05D005411 1.6e-42 176.4 173 54.3
Ciclev10028022m.g Citrus clementina HOM05D004142 ORTHO05D005411 1.6e-42 176.4 158 60.8
vmacro02340 Vaccinium macrocarpon HOM05D004142 ORTHO05D005411 1.6e-42 176.4 158 61.4
Aa31LG8G14620 Aethionema arabicum HOM05D004142 ORTHO05D005411 2.1e-42 176.0 165 57.0
Haze_02000 Corylus avellana HOM05D004142 ORTHO05D005411 3.5e-42 175.3 157 60.5
Potri.009G168100 Populus trichocarpa HOM05D004142 ORTHO05D005411 3.5e-42 175.3 147 60.5
Peaxi162Scf01986g00004 Petunia axillaris HOM05D004142 ORTHO05D005411 4.6e-42 174.9 150 63.3
Cfa005371 Carpinus fangiana HOM05D004142 ORTHO05D005411 6.0e-42 174.5 157 59.9
Sc08g0002210 Simmondsia chinensis HOM05D004142 ORTHO05D005411 7.9e-42 174.1 143 62.9
Sp3g30590 Schrenkiella parvula HOM05D004142 ORTHO05D005411 1.0e-41 173.7 168 56.0
QL11p056391 Quercus lobata HOM05D004142 ORTHO05D005411 1.3e-41 173.3 159 60.4
EL10Ac9g21530 Beta vulgaris HOM05D004142 ORTHO05D005411 2.3e-41 172.6 148 60.1
CiPaw.06G115400 Carya illinoinensis HOM05D004142 ORTHO05D005411 2.3e-41 172.6 158 58.9
Ah.05g178840 Amaranthus hybridus HOM05D004142 ORTHO05D005411 3.0e-41 172.2 149 59.7
Gohir.D13G057300 Gossypium hirsutum HOM05D004142 ORTHO05D005411 3.0e-41 172.2 157 60.5
Rhsim11G0198100 Rhododendron simsii HOM05D004142 ORTHO05D005411 3.0e-41 172.2 142 65.5
Phvul.008G235900 Phaseolus vulgaris HOM05D004142 ORTHO05D005411 8.7e-41 170.6 151 59.6
A09p11250 Brassica napus HOM05D004142 ORTHO05D005411 1.1e-40 170.2 169 52.1
Gorai.013G064000 Gossypium raimondii HOM05D004142 ORTHO05D005411 1.1e-40 170.2 157 59.9
BcaB07g31738 Brassica carinata HOM05D004142 ORTHO05D005411 1.5e-40 169.9 165 56.4
BraA09t36766Z Brassica rapa HOM05D004142 ORTHO05D005411 1.5e-40 169.9 168 52.4
Sabra09G0130600 Salix brachista HOM05D004142 ORTHO05D005852 3.3e-40 168.7 147 58.5
Glyma.02G245400 Glycine max HOM05D004142 ORTHO05D005411 7.4e-40 167.5 142 59.2
Gohir.A13G065000 Gossypium hirsutum HOM05D004142 ORTHO05D005411 7.4e-40 167.5 157 59.2
VMungo0647G1269 Vigna mungo HOM05D004142 ORTHO05D005411 9.7e-40 167.2 155 56.8
MSTRG.27614 Avicennia marina HOM05D004142 ORTHO05D005411 1.3e-39 166.8 151 60.3
BraA07t28174Z Brassica rapa HOM05D004142 ORTHO05D005411 1.3e-39 166.8 166 51.8
Migut.B01359 Erythranthe guttata HOM05D004142 ORTHO05D005411 2.2e-39 166.0 144 55.6
Psat2g043640 Pisum sativum HOM05D004142 ORTHO05D005411 2.8e-39 165.6 149 57.7
A07p03800 Brassica napus HOM05D004142 ORTHO05D005411 3.7e-39 165.2 166 51.8
SalBow5G1400 Salvia bowleyana HOM05D004142 ORTHO05D005411 4.8e-39 164.9 155 55.5
Lalb_Chr04g0251341 Lupinus albus HOM05D004142 ORTHO05D005411 1.1e-38 163.7 158 55.1
SalBow5G4664 Salvia bowleyana HOM05D004142 ORTHO05D005411 1.8e-38 162.9 154 55.2
Ca_05793_v3 Cicer arietinum L. HOM05D004142 ORTHO05D005411 3.1e-38 162.2 145 57.2
BcaB03g16472 Brassica carinata HOM05D004142 ORTHO05D005411 1.2e-37 160.2 164 50.6
Glyma.14G215500 Glycine max HOM05D004142 ORTHO05D005411 2.0e-37 159.5 147 55.8
TPR.G8874 Trifolium pratense HOM05D004142 ORTHO05D005411 2.2e-36 156.0 147 53.7
Ca_01556_v3 Cicer arietinum L. HOM05D004142 ORTHO05D005411 5.0e-36 154.8 138 57.2
Lsat_1_v5_gn_5_183861 Lactuca sativa HOM05D004142 ORTHO05D005411 1.1e-35 153.7 142 58.5
arahy.Tifrunner.gnm1.ann1.FRA838 Arachis hypogaea HOM05D004142 ORTHO05D005411 3.2e-35 152.1 151 52.3
CDE05G3311 Ceratophyllum demersum HOM05D004142 ORTHO05D005411 1.2e-34 150.2 153 49.7
LjContig00141g0017492 Lotus japonicus HOM05D004142 ORTHO05D005411 1.6e-34 149.8 134 56.7
HanXRQChr09g0239911 Helianthus annuus HOM05D004142 ORTHO05D005411 2.1e-34 149.4 135 57.8
HanXRQChr16g0515111 Helianthus annuus HOM05D004142 ORTHO05D005411 2.1e-34 149.4 146 52.7
ECA233G5375 Erigeron canadensis HOM05D004142 ORTHO05D005411 4.6e-34 148.3 147 53.7
arahy.Tifrunner.gnm1.ann1.52DH7S Arachis hypogaea HOM05D004142 ORTHO05D005411 6.1e-34 147.9 158 51.9
DCAR_005486 Daucus carota HOM05D004142 ORTHO05D005411 7.9e-34 147.5 151 54.3
unitig_578.g16758 Utricularia gibba HOM05D004142 ORTHO05D005411 1.8e-33 146.4 153 53.6
Medtr5g078780 Medicago truncatula HOM05D004142 ORTHO05D005411 2.3e-33 146.0 150 50.0
arahy.Tifrunner.gnm1.ann1.0H97XI Arachis hypogaea HOM05D004142 ORTHO05D005411 1.9e-32 142.9 158 50.0
Nitab4.5_0001700g0140 Nicotiana tabacum HOM05D004142 ORTHO05D005411 1.9e-32 142.9 124 61.3
Nitab4.5_0005657g0020 Nicotiana tabacum HOM05D004142 ORTHO05D005411 1.9e-32 142.9 117 64.1
HPP92_025663 Vanilla planifolia HOM05D004142 ORTHO05D005411 2.2e-31 139.4 145 54.5
Cc09_g10830 Coffea canephora HOM05D004142 ORTHO05D005411 2.8e-31 139.0 147 53.1
BcaC06g36246 Brassica carinata HOM05D004142 ORTHO05D005411 3.7e-31 138.7 145 48.3
C07p06050 Brassica napus HOM05D004142 ORTHO05D005411 3.7e-31 138.7 145 48.3
PSO541G0415 Papaver somniferum HOM05D004142 ORTHO05D005411 3.1e-30 135.6 152 47.4
MD05G1138800 Malus domestica HOM05D004142 ORTHO05D005411 5.3e-30 134.8 141 56.0
CSS0025136 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 2.0e-29 132.9 139 58.3
Os04g0585300 Oryza sativa ssp. japonica HOM05D004142 ORTHO05D005411 1.3e-28 130.2 146 43.8
SHI03796 Sapria himalayana HOM05D004142 ORTHO05D005411 2.2e-28 129.4 159 42.1
PSO675G0945 Papaver somniferum HOM05D004142 ORTHO05D005411 1.4e-27 126.7 152 44.7
AUR62013175 Chenopodium quinoa HOM05D004142 ORTHO05D005411 7.2e-27 124.4 152 46.7
BcaB07g31742 Brassica carinata HOM05D004142 ORTHO05D005411 6.1e-26 121.3 171 43.9
Zm00001eb428130 Zea mays HOM05D004142 ORTHO05D005411 2.0e-24 116.3 151 37.7
ATR0807G091 Amborella trichopoda HOM05D004142 ORTHO05D005411 5.7e-24 114.8 152 44.7
BolC7t41018H Brassica oleracea HOM05D004142 ORTHO05D005411 2.2e-23 112.8 121 47.9
TAR381G0855 Trochodendron aralioides HOM05D004142 ORTHO05D005411 5.3e-22 108.2 101 61.4
Atru.chr5.3556 Acer truncatum HOM05D004142 ORTHO05D005411 7.0e-22 107.8 145 45.5
BcaB07g31740 Brassica carinata HOM05D004142 ORTHO05D005411 9.1e-22 107.5 171 40.4
BcaC04g22984 Brassica carinata HOM05D004142 ORTHO05D005411 2.6e-21 105.9 94 60.6
MD11G1014300 Malus domestica HOM05D004142 ORTHO05D005411 4.5e-21 105.1 78 71.8
BcaB07g31739 Brassica carinata HOM05D004142 ORTHO05D005411 2.7e-18 95.9 173 39.3
CSS0034003 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 1.5e-11 73.6 118 46.6
SEGI_29991 Sequoiadendron giganteum HOM05D004142 ORTHO05D031210 1.9e-11 73.2 152 32.2
Mapoly0043s0054 Marchantia polymorpha HOM05D004142 ORTHO05D005411 4.2e-11 72.0 152 32.9
Psat3g160080 Pisum sativum HOM05D004142 ORTHO05D005411 5.7e-08 61.6 65 47.7
Pp3c9_12610 Physcomitrium patens HOM05D004142 ORTHO05D005411 1.7e-07 60.1 160 30.0


User provided reference genes

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