Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01004128001 Vitis vinifera HOM05D005992 ORTHO05D007476 4.4e-86 321.2 159 100.0
Manes.13G058400 Manihot esculenta HOM05D005992 ORTHO05D007476 1.8e-47 193.0 171 60.8
Dinv28773 Davidia involucrata HOM05D005992 ORTHO05D007476 1.3e-45 186.8 160 61.9
Nn7g37421 Nelumbo nucifera HOM05D005992 ORTHO05D007476 1.3e-45 186.8 158 64.6
Cpa.g.sc8.7 Carica papaya HOM05D005992 ORTHO05D007476 4.9e-45 184.9 172 59.9
QL09p044779 Quercus lobata HOM05D005992 ORTHO05D007476 3.2e-44 182.2 159 63.5
Manes.12G055803 Manihot esculenta HOM05D005992 ORTHO05D007476 5.4e-44 181.4 161 62.1
CiPaw.13G059000 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.0e-42 177.2 165 60.6
Thecc.01G203400 Theobroma cacao HOM05D005992 ORTHO05D007476 1.3e-42 176.8 175 57.7
RcHm_v2.0_Chr7g0176831 Rosa chinensis HOM05D005992 ORTHO05D007476 5.6e-41 171.4 146 63.7
FAN08G0048 Fragaria x ananassa HOM05D005992 ORTHO05D007476 7.3e-41 171.0 148 60.8
FvH4_5g18680 Fragaria vesca HOM05D005992 ORTHO05D007476 9.5e-41 170.6 150 62.0
Prupe.8G267200 Prunus persica HOM05D005992 ORTHO05D007476 9.5e-41 170.6 179 55.3
FAN18G0660 Fragaria x ananassa HOM05D005992 ORTHO05D007476 1.6e-40 169.9 150 62.0
Potri.014G172600 Populus trichocarpa HOM05D005992 ORTHO05D007476 2.1e-40 169.5 173 55.5
FAN04G1498 Fragaria x ananassa HOM05D005992 ORTHO05D007476 8.1e-40 167.5 148 59.5
Sc10g0006540 Simmondsia chinensis HOM05D005992 ORTHO05D007476 1.1e-39 167.2 163 59.5
CSS0023701 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.4e-39 166.8 169 54.4
CSS0036227 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.4e-39 166.8 169 54.4
FAN13G0560 Fragaria x ananassa HOM05D005992 ORTHO05D007476 1.8e-39 166.4 165 55.8
PGR044G1143 Punica granatum HOM05D005992 ORTHO05D007476 1.2e-38 163.7 165 55.2
AUR62017763 Chenopodium quinoa HOM05D005992 ORTHO05D007476 1.5e-38 163.3 161 54.0
Hma1.2p1_0834F.1_g225730 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 2.0e-38 162.9 169 53.3
Hma1.2p1_0161F.1_g071860 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 2.6e-38 162.5 166 54.8
MD03G1298800 Malus domestica HOM05D005992 ORTHO05D007476 2.2e-37 159.5 146 61.6
Gohir.A11G146200 Gossypium hirsutum HOM05D005992 ORTHO05D007476 1.1e-36 157.1 174 52.9
Gorai.007G163000 Gossypium raimondii HOM05D005992 ORTHO05D007476 2.4e-36 156.0 174 52.3
CANSAT11G0965 Cannabis sativa HOM05D005992 ORTHO05D007476 7.1e-36 154.5 174 52.3
Gohir.D11G152400 Gossypium hirsutum HOM05D005992 ORTHO05D007476 7.1e-36 154.5 174 52.3
COL.COLO4_19718 Corchorus olitorius HOM05D005992 ORTHO05D007476 9.2e-36 154.1 166 57.2
Duzib138G0279 Durio zibethinus HOM05D005992 ORTHO05D007476 1.2e-35 153.7 175 54.9
HPP92_004514 Vanilla planifolia HOM05D005992 ORTHO05D007476 2.1e-35 152.9 134 59.0
Lj1g0017920 Lotus japonicus HOM05D005992 ORTHO05D007476 2.3e-34 149.4 164 56.1
Cc01_g15730 Coffea canephora HOM05D005992 ORTHO05D007476 3.9e-34 148.7 169 53.3
Duzib133G0028 Durio zibethinus HOM05D005992 ORTHO05D007476 5.1e-34 148.3 172 50.0
TWI36G0694 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 6.6e-34 147.9 166 50.6
DCAR_018600 Daucus carota HOM05D005992 ORTHO05D007476 1.5e-33 146.7 186 50.5
HanXRQChr08g0230801 Helianthus annuus HOM05D005992 ORTHO05D007476 1.5e-33 146.7 163 55.8
MBI07_g44661_MAGBIO Magnolia biondii HOM05D005992 ORTHO05D007476 1.9e-33 146.4 144 55.6
Psat5g001840 Pisum sativum HOM05D005992 ORTHO05D007476 1.9e-33 146.4 163 55.8
TWI36G1335 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 3.3e-33 145.6 166 50.0
Lsat_1_v5_gn_9_15721 Lactuca sativa HOM05D005992 ORTHO05D007476 4.3e-33 145.2 175 52.6
CDE07G1966 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 2.1e-32 142.9 134 59.0
Ah.04g163410 Amaranthus hybridus HOM05D005992 ORTHO05D007476 2.8e-32 142.5 160 51.9
EL10Ac9g23025 Beta vulgaris HOM05D005992 ORTHO05D007476 8.1e-32 141.0 142 54.2
Eucgr.K02345 Eucalyptus grandis HOM05D005992 ORTHO05D007476 8.1e-32 141.0 171 51.5
PSO357G0365 Papaver somniferum HOM05D005992 ORTHO05D007476 8.1e-32 141.0 157 53.5
TWI75G1816 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 8.1e-32 141.0 166 48.8
PSO170G4201 Papaver somniferum HOM05D005992 ORTHO05D007476 1.4e-31 140.2 157 52.9
Glyma.06G002700 Glycine max HOM05D005992 ORTHO05D007476 4.0e-31 138.7 151 57.6
Os02g0609400 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 8.9e-31 137.5 142 52.8
VMungo1309G0397 Vigna mungo HOM05D005992 ORTHO05D007476 2.0e-30 136.3 162 56.2
Zm00001eb246760 Zea mays HOM05D005992 ORTHO05D007476 2.6e-30 136.0 129 53.5
CDE04G1688 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 5.8e-30 134.8 134 55.2
vmacro14669 Vaccinium macrocarpon HOM05D005992 ORTHO05D007476 5.8e-30 134.8 225 40.4
Medtr3g118100 Medicago truncatula HOM05D005992 ORTHO05D007476 9.9e-30 134.0 166 51.2
Oeu058218.1 Olea europaea HOM05D005992 ORTHO05D007476 1.7e-29 133.3 166 48.8
Phvul.009G118300 Phaseolus vulgaris HOM05D005992 ORTHO05D007476 1.7e-29 133.3 135 57.8
arahy.Tifrunner.gnm1.ann1.DJH8FA Arachis hypogaea HOM05D005992 ORTHO05D007476 2.2e-29 132.9 174 48.3
Lalb_Chr11g0061201 Lupinus albus HOM05D005992 ORTHO05D007476 2.2e-29 132.9 148 54.7
Atru.chr6.3466 Acer truncatum HOM05D005992 ORTHO05D007476 6.4e-29 131.3 169 48.5
ECA247G1400 Erigeron canadensis HOM05D005992 ORTHO05D007476 6.4e-29 131.3 165 50.9
Migut.D00757 Erythranthe guttata HOM05D005992 ORTHO05D007476 8.4e-29 131.0 167 48.5
Peaxi162Scf00390g00125 Petunia axillaris HOM05D005992 ORTHO05D007476 8.4e-29 131.0 153 52.3
Ciclev10016954m.g Citrus clementina HOM05D005992 ORTHO05D007476 1.4e-28 130.2 170 51.2
Ca_15291_v3 Cicer arietinum L. HOM05D005992 ORTHO05D007476 2.4e-28 129.4 178 48.3
TAR362G0776 Trochodendron aralioides HOM05D005992 ORTHO05D007476 2.4e-28 129.4 100 65.0
Rhsim01G0246100 Rhododendron simsii HOM05D005992 ORTHO05D007476 5.4e-28 128.3 137 49.6
AUR62032915 Chenopodium quinoa HOM05D005992 ORTHO05D007476 7.1e-28 127.9 129 49.6
CiPaw.14G047400 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.2e-27 127.1 129 58.9
Lj1C108T9 Lonicera japonica HOM05D005992 ORTHO05D007476 2.7e-27 125.9 108 59.3
Glyma.04G002700 Glycine max HOM05D005992 ORTHO05D007476 6.0e-27 124.8 157 53.5
SGA_v2.0_scaffold8G04484 Striga asiatica HOM05D005992 ORTHO05D007476 6.0e-27 124.8 172 49.4
MSTRG.18519 Avicennia marina HOM05D005992 ORTHO05D007476 1.3e-26 123.6 141 53.9
TWI18G0378 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.3e-26 123.6 138 49.3
Solyc06g082830.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 8.6e-26 120.9 139 54.0
Nitab4.5_0009028g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.5e-25 120.2 147 49.7
SalBow6G0883 Salvia bowleyana HOM05D005992 ORTHO05D007476 1.9e-25 119.8 178 44.4
THA.LOC104822452 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 2.5e-25 119.4 150 46.7
PGSC0003DMG400027679 Solanum tuberosum HOM05D005992 ORTHO05D007476 7.3e-25 117.9 147 51.7
Nitab4.5_0001348g0200 Nicotiana tabacum HOM05D005992 ORTHO05D007476 9.6e-25 117.5 159 50.3
Nitab4.5_0008751g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.2e-24 117.1 159 50.3
Sabra14G0132200 Salix brachista HOM05D005992 ORTHO05D007476 1.2e-24 117.1 215 39.5
Sopen06g034190 Solanum pennellii HOM05D005992 ORTHO05D007476 1.2e-24 117.1 140 53.6
ATR0743G072 Amborella trichopoda HOM05D005992 ORTHO05D007476 1.6e-24 116.7 129 45.0
arahy.Tifrunner.gnm1.ann1.B4TR6Y Arachis hypogaea HOM05D005992 ORTHO05D007476 2.8e-24 115.9 167 44.9
CAN.G874.50 Capsicum annuum HOM05D005992 ORTHO05D007476 3.6e-24 115.5 134 53.0
Nitab4.5_0005967g0050 Nicotiana tabacum HOM05D005992 ORTHO05D007476 4.7e-24 115.2 147 46.9
Os02g0599500 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 6.8e-23 111.3 108 53.7
Aqoxy2G04184 Aquilegia oxysepala HOM05D001906 ORTHO05D002083 1.2e-22 110.5 134 44.8
THA.LOC104819021 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 1.5e-22 110.2 150 46.0
SalBow2G0316 Salvia bowleyana HOM05D005992 ORTHO05D007476 7.6e-22 107.8 208 37.5
TPR.G38510 Trifolium pratense HOM05D005992 ORTHO05D007476 3.2e-20 102.4 128 50.0
Hma1.2p1_1756F.1_g301045 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 1.0e-18 97.4 104 52.9
unitig_60.g25570 Utricularia gibba HOM05D005992 ORTHO05D007476 2.5e-17 92.8 148 44.6
AL8G21060 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 3.3e-17 92.4 134 44.8
AT5G48335 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 1.6e-16 90.1 138 42.0
CARHR183920 Cardamine hirsuta HOM05D005992 ORTHO05D007476 4.8e-16 88.6 140 41.4
BraA05t22792Z Brassica rapa HOM05D005992 ORTHO05D007476 4.0e-15 85.5 156 40.4
Oeu064700.1 Olea europaea HOM05D005992 ORTHO05D007476 9.0e-15 84.3 100 48.0
Thhalv10021713m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 2.0e-14 83.2 132 43.2
Carub.0008s0791 Capsella rubella HOM05D005992 ORTHO05D007476 5.8e-14 81.6 137 44.5
Sp3g06520 Schrenkiella parvula HOM05D005992 ORTHO05D007476 6.4e-13 78.2 156 38.5
Actinidia23817 Actinidia chinensis HOM05D005992 ORTHO05D007476 1.3e-10 70.5 82 48.8
A05p40610 Brassica napus HOM05D005992 ORTHO05D007476 1.3e-10 70.5 156 35.3
C05p59720 Brassica napus HOM05D005992 ORTHO05D007476 2.3e-10 69.7 152 35.5
BolC5t34626H Brassica oleracea HOM05D005992 ORTHO05D007476 2.3e-10 69.7 152 35.5
Sopen09g012660 Solanum pennellii HOM05D005992 ORTHO05D007476 3.0e-10 69.3 67 52.2
PGSC0003DMG400020300 Solanum tuberosum HOM05D005992 ORTHO05D007476 5.6e-09 65.1 83 49.4
Carub.0003s0715 Capsella rubella HOM05D005992 ORTHO05D007476 9.6e-09 64.3 59 55.9
AL3G18940 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 2.1e-08 63.2 66 47.0
CDE06G0073 Ceratophyllum demersum HOM05D001961 ORTHO05D002286 6.2e-08 61.6 75 52.0
Aqoxy4G02934 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 8.1e-08 61.2 119 34.5
BcaC05g29553 Brassica carinata HOM05D005992 ORTHO05D007476 1.4e-07 60.5 119 37.8
CARHR082280 Cardamine hirsuta HOM05D005992 ORTHO05D007476 4.5e-06 55.5 124 37.1


User provided reference genes

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