Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 6.7e-154 547.4 283 100.0
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 1.1e-76 290.8 305 57.7
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 2.3e-66 256.5 304 53.9
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 5.4e-63 245.4 301 50.5
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 3.5e-62 242.7 287 55.1
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 4.6e-62 242.3 289 52.9
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 3.0e-61 239.6 315 46.3
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 1.9e-60 236.9 290 50.7
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 9.5e-60 234.6 304 46.4
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 3.6e-59 232.6 285 49.8
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 5.8e-57 225.3 306 45.4
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 2.2e-56 223.4 327 43.4
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 1.1e-55 221.1 272 50.4
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 1.1e-55 221.1 293 48.5
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 5.4e-55 218.8 327 43.1
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 1.6e-54 217.2 285 48.8
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 2.7e-54 216.5 288 48.3
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 3.5e-54 216.1 283 50.5
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 6.0e-54 215.3 292 44.9
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 1.7e-53 213.8 302 45.0
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 2.3e-53 213.4 300 48.3
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 5.1e-53 212.2 317 49.5
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 5.1e-53 212.2 240 52.5
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 1.9e-52 210.3 290 48.6
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 2.5e-52 209.9 301 46.8
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 2.1e-51 206.8 291 46.4
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 1.4e-50 204.1 341 44.9
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 1.8e-50 203.8 306 46.4
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 1.2e-49 201.1 306 46.7
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 1.5e-49 200.7 299 45.2
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 3.4e-49 199.5 312 42.9
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 4.4e-49 199.1 329 43.5
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 5.8e-49 198.7 312 45.5
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 6.4e-48 195.3 284 45.4
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 2.4e-47 193.4 346 37.6
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 5.4e-47 192.2 339 39.8
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 3.5e-46 189.5 330 40.3
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 5.1e-45 185.7 284 43.3
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.5e-44 184.1 319 39.5
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.5e-44 184.1 319 39.5
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 1.9e-44 183.7 284 43.7
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 2.5e-44 183.3 333 41.4
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 5.6e-44 182.2 341 41.3
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 9.6e-44 181.4 311 40.8
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 2.8e-43 179.9 326 39.6
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 1.4e-42 177.6 291 41.9
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 4.0e-42 176.0 254 42.9
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 1.2e-41 174.5 269 41.6
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 7.6e-41 171.8 284 44.4
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 3.8e-40 169.5 302 40.7
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 6.4e-40 168.7 309 41.1
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 8.4e-40 168.3 311 39.5
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 8.4e-40 168.3 300 39.7
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 1.1e-39 167.9 282 43.6
Haze_12236 Corylus avellana HOM05D006585 ORTHO05D007798 6.0e-38 162.2 199 51.8
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 1.3e-37 161.0 297 38.7
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 1.8e-37 160.6 299 38.8
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 2.5e-36 156.8 273 40.3
Lalb_Chr16g0392221 Lupinus albus HOM05D006585 ORTHO05D007798 7.4e-36 155.2 203 51.2
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 2.1e-35 153.7 294 38.8
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 2.4e-34 150.2 286 38.5
PGR119G1584 Punica granatum HOM05D006585 ORTHO05D007798 1.2e-33 147.9 293 39.9
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 2.6e-33 146.7 314 38.9
Rhsim12G0041300 Rhododendron simsii HOM05D006585 ORTHO05D007798 2.9e-32 143.3 418 33.3
TPR.G34666 Trifolium pratense HOM05D006585 ORTHO05D007798 8.4e-32 141.7 168 50.6
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 3.2e-31 139.8 275 37.8
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 3.2e-31 139.8 308 35.7
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 9.3e-31 138.3 308 34.7
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 3.5e-30 136.3 346 32.7
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 1.8e-29 134.0 346 33.8
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 3.9e-29 132.9 359 32.6
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 5.1e-29 132.5 260 37.7
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 3.3e-28 129.8 341 36.4
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 5.6e-28 129.0 316 35.8
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 1.6e-27 127.5 289 35.3
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 2.1e-27 127.1 376 30.6
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 1.1e-26 124.8 270 37.0
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 1.4e-26 124.4 347 30.8
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 4.0e-26 122.9 363 30.3
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 1.0e-24 118.2 286 34.6
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.3e-24 117.9 157 43.3
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 1.7e-24 117.5 310 33.2
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 3.8e-24 116.3 288 33.3
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 1.1e-23 114.8 338 30.8
Atru.chr11.2134 Acer truncatum HOM05D006585 ORTHO05D007798 4.2e-23 112.8 268 36.2
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 4.2e-23 112.8 284 29.9
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 5.5e-23 112.5 171 40.4
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 7.1e-23 112.1 383 29.0
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 1.2e-22 111.3 260 35.8
Atru.chr11.2118 Acer truncatum HOM05D006585 ORTHO05D007798 1.6e-22 110.9 268 35.8
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 7.9e-22 108.6 410 28.0
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 2.3e-21 107.1 123 52.0
PSO063G0496 Papaver somniferum HOM05D006585 ORTHO05D007798 2.4e-18 97.1 297 30.6
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 3.1e-18 96.7 390 26.9
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 2.6e-17 93.6 430 27.2
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 5.9e-17 92.4 234 34.6
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 5.0e-16 89.4 233 34.3
Glyma.08G283200 Glycine max HOM05D006585 ORTHO05D007798 1.1e-15 88.2 76 57.9
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 4.2e-15 86.3 321 27.7
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 7.2e-15 85.5 397 25.9
HPP92_008334 Vanilla planifolia HOM05D034240 ORTHO05D007798 7.2e-15 85.5 197 32.0
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 7.9e-14 82.0 200 33.5
SalBow8G2270 Salvia bowleyana HOM05D006585 ORTHO05D007798 2.0e-12 77.4 198 32.3
PSO832G3049 Papaver somniferum HOM05D000629 ORTHO05D007798 3.3e-12 76.6 200 33.0
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 1.3e-11 74.7 138 38.4
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 3.7e-11 73.2 141 37.6
Oeu056719.1 Olea europaea HOM05D006585 ORTHO05D007798 6.3e-11 72.4 220 31.8
PSO832G2940 Papaver somniferum HOM05D006585 ORTHO05D007798 1.5e-09 67.8 103 40.8
CDE06G0796 Ceratophyllum demersum HOM05D006585 ORTHO05D007798 6.5e-08 62.4 295 28.1
DCAR_005656 Daucus carota HOM05D006585 ORTHO05D007798 1.4e-07 61.2 79 45.6


User provided reference genes

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