Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.9e-117 425.2 214 100.0
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 4.1e-79 298.5 154 100.0
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.5e-78 296.6 154 99.4
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.3e-77 293.5 154 98.1
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 2.6e-65 252.7 209 67.0
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 4.1e-63 245.4 217 65.0
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 2.0e-62 243.0 181 70.7
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 5.9e-62 241.5 219 65.3
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 1.7e-61 240.0 211 66.4
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 2.9e-61 239.2 208 66.8
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 5.0e-61 238.4 219 61.6
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 8.5e-61 237.7 173 70.5
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 1.6e-59 233.4 206 65.5
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 4.7e-59 231.9 165 72.7
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 1.4e-58 230.3 138 81.2
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 1.4e-58 230.3 224 59.4
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 6.8e-58 228.0 252 54.4
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 2.0e-57 226.5 212 60.4
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 3.4e-57 225.7 203 65.0
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 3.4e-57 225.7 145 77.2
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 4.4e-57 225.3 215 59.1
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 5.7e-57 224.9 206 59.2
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 9.8e-57 224.2 203 61.6
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 9.8e-57 224.2 184 66.3
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 1.7e-56 223.4 215 60.5
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 1.7e-56 223.4 229 57.6
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 2.2e-56 223.0 184 66.3
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 2.8e-56 222.6 171 70.8
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 2.8e-56 222.6 187 66.8
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 6.3e-56 221.5 193 62.7
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 8.3e-56 221.1 177 68.9
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 8.3e-56 221.1 215 60.0
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 1.4e-55 220.3 169 68.6
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 7.0e-55 218.0 175 63.4
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 9.1e-55 217.6 169 68.6
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 2.7e-54 216.1 169 67.5
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 2.7e-54 216.1 185 61.6
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 4.5e-54 215.3 205 59.0
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 5.9e-54 214.9 162 70.4
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 7.7e-54 214.5 154 72.7
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 1.3e-53 213.8 171 64.3
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 1.7e-53 213.4 127 82.7
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 1.7e-53 213.4 217 58.5
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 2.2e-53 213.0 192 62.0
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 2.9e-53 212.6 192 62.0
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 3.8e-53 212.2 159 69.2
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 3.8e-53 212.2 124 83.1
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 5.0e-53 211.8 164 68.3
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 5.0e-53 211.8 183 61.2
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 6.5e-53 211.5 183 64.5
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 1.5e-52 210.3 175 65.1
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 1.9e-52 209.9 225 54.2
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 2.5e-52 209.5 162 67.9
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 4.2e-52 208.8 190 61.1
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 4.2e-52 208.8 214 58.4
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 4.2e-52 208.8 154 68.8
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 7.2e-52 208.0 201 57.2
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 7.2e-52 208.0 227 54.2
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 1.2e-51 207.2 185 62.7
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 2.7e-51 206.1 124 83.1
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 6.1e-51 204.9 127 76.4
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 1.4e-50 203.8 162 68.5
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 1.4e-50 203.8 128 75.8
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 6.8e-50 201.4 154 74.0
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 8.8e-50 201.1 190 60.0
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 2.0e-49 199.9 213 56.3
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 1.1e-47 194.1 219 52.1
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 4.1e-47 192.2 169 65.1
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 5.4e-47 191.8 197 54.8
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 1.6e-46 190.3 117 78.6
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 4.5e-46 188.7 158 62.0
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 7.7e-46 188.0 120 78.3
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 1.1e-44 184.1 186 57.5
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 7.3e-44 181.4 157 63.1
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 1.0e-42 177.6 133 66.9
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 3.4e-41 172.6 140 67.9
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 8.3e-40 167.9 163 56.4
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 7.0e-39 164.9 220 48.2
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 1.6e-38 163.7 175 55.4
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 1.3e-37 160.6 127 59.1
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.3e-37 159.8 83 100.0
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 8.6e-37 157.9 121 64.5
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 8.6e-37 157.9 92 82.6
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 2.5e-36 156.4 124 61.3
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 5.6e-36 155.2 94 88.3
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 7.3e-36 154.8 208 47.6
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 1.2e-35 154.1 104 75.0
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 8.0e-35 151.4 120 62.5
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 2.3e-34 149.8 92 80.4
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 1.5e-33 147.1 124 63.7
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 3.4e-33 146.0 131 60.3
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 5.8e-33 145.2 127 57.5
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 1.2e-30 137.5 101 73.3
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 3.3e-28 129.4 71 85.9
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.2e-27 127.5 83 74.7
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.1e-26 124.4 208 41.8
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 1.2e-25 120.9 80 75.0
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 3.4e-25 119.4 105 61.0
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 4.9e-24 115.5 92 66.3
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 1.4e-18 97.4 128 47.7
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 3.4e-17 92.8 49 89.8
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 5.8e-17 92.0 70 68.6
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 1.4e-15 87.4 64 67.2
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 4.6e-14 82.4 124 41.9
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 1.1e-12 77.8 124 40.3
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 5.6e-12 75.5 91 51.6
GSVIVG01012425001 Vitis vinifera HOM05D007159 ORTHO05D438080 1.2e-09 67.8 30 100.0
Rhsim03G0219300 Rhododendron simsii HOM05D009116 ORTHO05D011299 2.2e-08 63.5 165 27.9
Os04g0600100 Oryza sativa ssp. japonica HOM05D009116 ORTHO05D011299 3.8e-08 62.8 118 30.5
MSTRG.26944 Avicennia marina HOM05D009116 ORTHO05D011299 4.9e-08 62.4 155 28.4
unitig_52.g17699 Utricularia gibba HOM05D009116 ORTHO05D011299 6.4e-08 62.0 117 29.9
Migut.F00112 Erythranthe guttata HOM05D009116 ORTHO05D011299 1.1e-07 61.2 147 29.3
Mapoly0065s0044 Marchantia polymorpha HOM05D009116 ORTHO05D011299 3.2e-07 59.7 143 29.4
CDE02G3635 Ceratophyllum demersum HOM05D009116 ORTHO05D011299 4.2e-07 59.3 116 33.6
QL04p022221 Quercus lobata HOM05D000002 ORTHO05D000001 4.2e-07 59.3 102 45.1
AagrBONN_evm.TU.Sc2ySwM_368.2113 Anthoceros agrestis HOM05D009116 ORTHO05D011299 9.3e-07 58.2 121 31.4
Ciclev10012634m.g Citrus clementina HOM05D009116 ORTHO05D011299 9.3e-07 58.2 173 28.9
Nitab4.5_0000115g0230 Nicotiana tabacum HOM05D009116 ORTHO05D011299 1.2e-06 57.8 195 26.2
Oeu038114.2 Olea europaea HOM05D002675 ORTHO05D003322 2.1e-06 57.0 152 26.3
COL.COLO4_34141 Corchorus olitorius HOM05D009116 ORTHO05D011299 3.5e-06 56.2 180 28.3
Hund27206 Selenicereus undatus HOM05D009116 ORTHO05D011299 3.5e-06 56.2 185 25.4
Eucgr.H00677 Eucalyptus grandis HOM05D009116 ORTHO05D011299 6.0e-06 55.5 209 24.9
PGR031G3920 Punica granatum HOM05D009116 ORTHO05D011299 6.0e-06 55.5 164 28.0


User provided reference genes

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