Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003863001 Vitis vinifera HOM05D007928 ORTHO05D009207 1.5e-58 229.2 106 100.0
COL.COLO4_11686 Corchorus olitorius HOM05D007928 ORTHO05D009207 5.2e-27 124.4 106 56.6
Duzib147G1143 Durio zibethinus HOM05D007928 ORTHO05D009207 6.8e-27 124.0 106 59.4
Cfa006837 Carpinus fangiana HOM05D007928 ORTHO05D009207 2.4e-24 115.5 105 55.2
Thecc.01G084700 Theobroma cacao HOM05D007928 ORTHO05D009207 7.0e-24 114.0 106 55.7
Cc07_g07960 Coffea canephora HOM05D007928 ORTHO05D009207 3.0e-22 108.6 94 57.4
TAR628G0787 Trochodendron aralioides HOM05D007928 ORTHO05D009207 3.9e-22 108.2 87 60.9
Actinidia16387 Actinidia chinensis HOM05D007928 ORTHO05D009207 5.0e-22 107.8 96 57.3
Haze_03925 Corylus avellana HOM05D007928 ORTHO05D009207 3.3e-21 105.1 100 54.0
Dinv36974 Davidia involucrata HOM05D007928 ORTHO05D009207 7.3e-21 104.0 84 59.5
Oeu030822.1 Olea europaea HOM05D007928 ORTHO05D009207 9.5e-21 103.6 105 56.2
MBI16_g14338_MAGBIO Magnolia biondii HOM05D007928 ORTHO05D009207 1.2e-20 103.2 105 47.6
MBI16_g36545_MAGBIO Magnolia biondii HOM05D007928 ORTHO05D009207 1.6e-20 102.8 104 48.1
Gorai.008G088800 Gossypium raimondii HOM05D007928 ORTHO05D009207 2.8e-20 102.1 101 55.4
Oeu054747.1 Olea europaea HOM05D007928 ORTHO05D009207 4.7e-20 101.3 92 56.5
Gohir.A12G082800 Gossypium hirsutum HOM05D007928 ORTHO05D009207 2.3e-19 99.0 101 53.5
MBI16_g07262_MAGBIO Magnolia biondii HOM05D007928 ORTHO05D009207 2.3e-19 99.0 106 53.8
Gohir.A11G208300 Gossypium hirsutum HOM05D007928 ORTHO05D009207 1.5e-18 96.3 105 53.3
Gohir.D11G215100 Gossypium hirsutum HOM05D007928 ORTHO05D009207 2.0e-18 95.9 105 53.3
Gorai.007G230900 Gossypium raimondii HOM05D007928 ORTHO05D009207 2.0e-18 95.9 105 53.3
Atru.chr3.1179 Acer truncatum HOM05D007928 ORTHO05D009207 4.4e-18 94.7 113 47.8
Manes.12G121900 Manihot esculenta HOM05D007928 ORTHO05D009207 5.8e-18 94.4 108 50.9
Oeu050985.1 Olea europaea HOM05D007928 ORTHO05D009207 5.8e-18 94.4 93 54.8
Phvul.002G143700 Phaseolus vulgaris HOM05D007928 ORTHO05D009207 7.5e-18 94.0 90 52.2
Nn5g29796 Nelumbo nucifera HOM05D007928 ORTHO05D009207 9.8e-18 93.6 87 54.0
VMungo1215G2120 Vigna mungo HOM05D007928 ORTHO05D009207 1.7e-17 92.8 103 47.6
Prupe.6G209000 Prunus persica HOM05D007928 ORTHO05D009207 6.4e-17 90.9 110 45.5
FvH4_1g19100 Fragaria vesca HOM05D007928 ORTHO05D009207 8.3e-17 90.5 112 46.4
FAN19G2807 Fragaria x ananassa HOM05D007928 ORTHO05D009207 8.3e-17 90.5 112 46.4
FAN26G1033 Fragaria x ananassa HOM05D007928 ORTHO05D009207 1.4e-16 89.7 111 45.9
Gorai.007G058100 Gossypium raimondii HOM05D007928 ORTHO05D009207 1.9e-16 89.4 94 54.3
Cpa.g.sc129.13 Carica papaya HOM05D007928 ORTHO05D009207 2.4e-16 89.0 121 48.8
CiPaw.08G144700 Carya illinoinensis HOM05D007928 ORTHO05D009207 2.4e-16 89.0 112 49.1
Lalb_Chr16g0381521 Lupinus albus HOM05D007928 ORTHO05D009207 3.2e-16 88.6 105 50.5
Nn1g05659 Nelumbo nucifera HOM05D007928 ORTHO05D009207 4.1e-16 88.2 87 50.6
Glyma.09G201900 Glycine max HOM05D007928 ORTHO05D009207 9.2e-16 87.0 89 51.7
Glyma.01G020400 Glycine max HOM05D007928 ORTHO05D009207 2.1e-15 85.9 101 46.5
RcHm_v2.0_Chr2g0110091 Rosa chinensis HOM05D007928 ORTHO05D009207 2.1e-15 85.9 107 47.7
Nitab4.5_0000036g0450 Nicotiana tabacum HOM05D007928 ORTHO05D009207 6.0e-15 84.3 109 43.1
Lj2g0015328 Lotus japonicus HOM05D007928 ORTHO05D009207 1.0e-14 83.6 97 50.5
CsaV3_6G044800 Cucumis sativus L. HOM05D007928 ORTHO05D009207 3.3e-13 78.6 95 45.3
Nitab4.5_0007512g0040 Nicotiana tabacum HOM05D007928 ORTHO05D009207 4.3e-13 78.2 99 44.4
Medtr5g030990 Medicago truncatula HOM05D007928 ORTHO05D009207 5.6e-13 77.8 90 41.1
Nitab4.5_0003051g0030 Nicotiana tabacum HOM05D007928 ORTHO05D009207 5.6e-13 77.8 111 40.5
Rhsim08G0088100 Rhododendron simsii HOM05D007928 ORTHO05D009207 7.3e-13 77.4 90 50.0
SalBow3G1764 Salvia bowleyana HOM05D007928 ORTHO05D009207 7.3e-13 77.4 70 54.3
SalBow3G2359 Salvia bowleyana HOM05D007928 ORTHO05D009207 7.3e-13 77.4 70 54.3
Lalb_Chr09g0325821 Lupinus albus HOM05D007928 ORTHO05D009207 9.5e-13 77.0 104 46.2
Solyc02g063380.1 Solanum lycopersicum HOM05D007928 ORTHO05D009207 1.6e-12 76.3 86 44.2
PGSC0003DMG400010390 Solanum tuberosum HOM05D007928 ORTHO05D009207 1.6e-12 76.3 87 44.8
TPR.G37018 Trifolium pratense HOM05D007928 ORTHO05D009207 2.1e-12 75.9 104 41.3
Ciclev10026783m.g Citrus clementina HOM05D007928 ORTHO05D009207 2.8e-12 75.5 102 47.1
MELO3C007699.2 Cucumis melo HOM05D007928 ORTHO05D009207 2.8e-12 75.5 87 47.1
Migut.H00287 Erythranthe guttata HOM05D007928 ORTHO05D009207 3.6e-12 75.1 106 46.2
Migut.L00450 Erythranthe guttata HOM05D007928 ORTHO05D009207 4.7e-12 74.7 104 42.3
Sopen02g014470 Solanum pennellii HOM05D007928 ORTHO05D009207 4.7e-12 74.7 88 43.2
Peaxi162Scf00943g00053 Petunia axillaris HOM05D007928 ORTHO05D009207 1.8e-11 72.8 94 46.8
SGA_v2.0_scaffold149G36512 Striga asiatica HOM05D007928 ORTHO05D009207 3.1e-11 72.0 95 43.2
Peaxi162Scf00703g00018 Petunia axillaris HOM05D007928 ORTHO05D009207 6.8e-11 70.9 91 39.6
ClCG01G018220 Citrullus lanatus HOM05D007928 ORTHO05D009207 1.2e-10 70.1 102 42.2
CiPaw.07G043300 Carya illinoinensis HOM05D007928 ORTHO05D009207 2.6e-10 68.9 89 41.6
Gohir.A11G049900 Gossypium hirsutum HOM05D007928 ORTHO05D009207 2.6e-10 68.9 63 57.1
Lsat_1_v5_gn_3_81040 Lactuca sativa HOM05D007928 ORTHO05D009207 2.6e-10 68.9 94 47.9
CDE01G0331 Ceratophyllum demersum HOM05D007928 ORTHO05D009207 7.6e-10 67.4 80 48.8
FAN23G2934 Fragaria x ananassa HOM05D007928 ORTHO05D009207 4.9e-09 64.7 85 44.7
Sc03g0000550 Simmondsia chinensis HOM05D007928 ORTHO05D009207 1.1e-08 63.5 105 44.8
ECA232G2728 Erigeron canadensis HOM05D011897 ORTHO05D009207 2.4e-08 62.4 94 45.7
Sed0007366 Sechium edule HOM05D007928 ORTHO05D009207 4.1e-08 61.6 86 43.0
EL10Ac6g13311 Beta vulgaris HOM05D007928 ORTHO05D009207 7.1e-08 60.8 117 41.0
Ah.03g134340 Amaranthus hybridus HOM05D007928 ORTHO05D009207 9.2e-08 60.5 95 43.2
THA.LOC109116076 Tarenaya hassleriana HOM05D013367 ORTHO05D009207 9.2e-08 60.5 104 37.5
Lsat_1_v5_gn_4_156780 Lactuca sativa HOM05D011897 ORTHO05D009207 1.2e-07 60.1 89 47.2
arahy.Tifrunner.gnm1.ann1.WFP9WJ Arachis hypogaea HOM05D007928 ORTHO05D009207 6.0e-07 57.8 121 37.2
Thhalv10005166m.g Eutrema salsugineum HOM05D013367 ORTHO05D009207 6.0e-07 57.8 113 36.3
Sp2g28700 Schrenkiella parvula HOM05D013367 ORTHO05D009207 7.8e-07 57.4 97 42.3
AL112U10020 Arabidopsis lyrata HOM05D013367 ORTHO05D009207 1.0e-06 57.0 89 43.8
C03p60140 Brassica napus HOM05D013367 ORTHO05D009207 1.3e-06 56.6 94 40.4
BolC3t18278H Brassica oleracea HOM05D013367 ORTHO05D009207 1.3e-06 56.6 94 40.4
AL8G43200 Arabidopsis lyrata HOM05D013367 ORTHO05D009207 1.7e-06 56.2 89 43.8
Lsat_1_v5_gn_4_157020 Lactuca sativa HOM05D007928 ORTHO05D009207 2.3e-06 55.8 89 42.7
Lsat_1_v5_gn_4_156501 Lactuca sativa HOM05D011897 ORTHO05D009207 3.0e-06 55.5 79 44.3
Lsat_1_v5_gn_4_157180 Lactuca sativa HOM05D011897 ORTHO05D009207 3.0e-06 55.5 79 45.6
Lsat_1_v5_gn_4_157220 Lactuca sativa HOM05D011897 ORTHO05D009207 3.0e-06 55.5 79 45.6
Sed0026702 Sechium edule HOM05D007928 ORTHO05D009207 3.0e-06 55.5 93 37.6
Lsat_1_v5_gn_4_157500 Lactuca sativa HOM05D007928 ORTHO05D009207 5.1e-06 54.7 89 42.7
A06p32450 Brassica napus HOM05D013367 ORTHO05D009207 6.6e-06 54.3 94 39.4
BraA06t26169Z Brassica rapa HOM05D013367 ORTHO05D009207 6.6e-06 54.3 94 39.4
Lsat_1_v5_gn_4_157100 Lactuca sativa HOM05D011897 ORTHO05D009207 6.6e-06 54.3 49 57.1
Lsat_1_v5_gn_4_157120 Lactuca sativa HOM05D011897 ORTHO05D009207 6.6e-06 54.3 79 44.3
PGSC0003DMG400030657 Solanum tuberosum HOM05D007928 ORTHO05D009207 6.6e-06 54.3 81 42.0


User provided reference genes

Program Settings