Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 7.9e-82 307.0 148 100.0
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 1.5e-51 206.5 131 71.8
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 9.4e-51 203.8 138 70.3
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 1.2e-50 203.4 118 76.3
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 1.6e-50 203.0 118 75.4
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 2.7e-50 202.2 118 75.4
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 3.6e-50 201.8 118 75.4
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 4.7e-50 201.4 140 67.9
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 6.1e-50 201.1 137 67.9
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 6.1e-50 201.1 137 67.9
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 8.0e-50 200.7 147 66.0
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 8.0e-50 200.7 118 74.6
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 8.0e-50 200.7 140 66.4
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 1.0e-49 200.3 150 63.3
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.4e-49 199.9 143 62.9
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 1.4e-49 199.9 131 68.7
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 1.4e-49 199.9 128 70.3
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.8e-49 199.5 131 67.9
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 2.3e-49 199.1 145 62.8
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 2.3e-49 199.1 118 75.4
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 2.3e-49 199.1 118 73.7
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 3.0e-49 198.7 119 73.9
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 3.0e-49 198.7 119 68.9
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 3.0e-49 198.7 131 67.9
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 4.0e-49 198.4 138 65.9
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 4.0e-49 198.4 138 65.9
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 5.2e-49 198.0 119 73.1
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 5.2e-49 198.0 118 74.6
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 5.2e-49 198.0 137 67.2
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 5.2e-49 198.0 121 72.7
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 5.2e-49 198.0 138 65.9
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 5.2e-49 198.0 118 72.9
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 5.2e-49 198.0 118 72.9
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 6.8e-49 197.6 118 73.7
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 6.8e-49 197.6 121 71.9
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 8.8e-49 197.2 118 72.9
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 8.8e-49 197.2 121 71.9
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 1.2e-48 196.8 138 65.2
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 1.2e-48 196.8 137 66.4
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 1.5e-48 196.4 137 67.2
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 1.5e-48 196.4 118 73.7
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.5e-48 196.4 118 72.0
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 2.0e-48 196.1 118 72.9
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 2.0e-48 196.1 121 69.4
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 2.0e-48 196.1 118 71.2
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 2.6e-48 195.7 118 72.9
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 3.4e-48 195.3 119 71.4
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 3.4e-48 195.3 118 72.9
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 3.4e-48 195.3 118 72.9
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 4.4e-48 194.9 119 72.3
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 4.4e-48 194.9 118 72.9
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 4.4e-48 194.9 118 71.2
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 4.4e-48 194.9 118 71.2
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 5.7e-48 194.5 137 62.8
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 7.5e-48 194.1 118 72.0
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 7.5e-48 194.1 139 64.0
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 9.8e-48 193.7 118 72.0
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 9.8e-48 193.7 118 72.0
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 9.8e-48 193.7 118 72.9
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 9.8e-48 193.7 118 72.0
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 9.8e-48 193.7 118 72.9
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 9.8e-48 193.7 118 69.5
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 9.8e-48 193.7 118 69.5
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 9.8e-48 193.7 118 72.9
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 9.8e-48 193.7 118 72.9
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 9.8e-48 193.7 118 70.3
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 1.7e-47 193.0 118 72.9
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 1.7e-47 193.0 118 71.2
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 2.2e-47 192.6 118 71.2
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 2.2e-47 192.6 119 70.6
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 2.2e-47 192.6 139 64.0
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 2.2e-47 192.6 118 71.2
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 2.8e-47 192.2 118 68.6
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 2.8e-47 192.2 137 63.5
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 2.8e-47 192.2 139 62.6
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 2.8e-47 192.2 118 70.3
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 2.8e-47 192.2 139 64.0
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 4.8e-47 191.4 138 62.3
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 4.8e-47 191.4 118 71.2
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 6.3e-47 191.0 118 70.3
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 6.3e-47 191.0 118 70.3
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 1.1e-46 190.3 118 70.3
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 1.8e-46 189.5 119 66.4
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 2.4e-46 189.1 121 71.9
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 3.1e-46 188.7 118 71.2
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 3.1e-46 188.7 144 61.8
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 3.1e-46 188.7 136 61.8
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 3.1e-46 188.7 136 61.8
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 3.1e-46 188.7 119 68.1
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 3.1e-46 188.7 121 71.1
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 4.1e-46 188.3 121 71.9
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 5.4e-46 188.0 119 69.7
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 1.2e-45 186.8 119 68.1
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 1.6e-45 186.4 118 69.5
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 1.6e-45 186.4 118 68.6
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 3.5e-45 185.3 138 62.3
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 3.5e-45 185.3 119 68.1
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 4.5e-45 184.9 118 66.9
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 4.5e-45 184.9 119 68.1
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 7.7e-45 184.1 119 67.2
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 1.0e-44 183.7 118 65.3
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 1.7e-44 183.0 118 66.9
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 8.6e-44 180.6 116 69.0
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 2.5e-43 179.1 118 65.3
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 4.4e-40 168.3 104 73.1
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 2.8e-39 165.6 124 62.9
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 1.4e-38 163.3 104 68.3
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 1.3e-36 156.8 142 54.2
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 2.3e-36 156.0 105 62.9
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 3.6e-34 148.7 119 50.4
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 4.7e-34 148.3 91 71.4
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 4.9e-31 138.3 119 47.9
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 6.6e-28 127.9 119 48.7
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 1.2e-26 123.6 84 65.5
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 1.4e-25 120.2 74 62.2
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 2.9e-23 112.5 91 58.2
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 1.4e-22 110.2 92 57.6
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 2.4e-22 109.4 69 69.6
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 3.7e-15 85.5 118 37.3
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 8.3e-15 84.3 75 53.3
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 3.5e-13 79.0 122 33.6
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 1.7e-12 76.6 51 64.7
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 6.6e-12 74.7 51 64.7
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 1.8e-09 66.6 121 39.7
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.7e-07 60.1 129 30.2


User provided reference genes

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