Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003776001 Vitis vinifera HOM05D004401 ORTHO05D005169 5.0e-34 147.1 70 100.0
GSVIVG01003774001 Vitis vinifera HOM05D004401 ORTHO05D005169 2.3e-31 138.3 67 97.0
Dinv26777 Davidia involucrata HOM05D004401 ORTHO05D005169 4.5e-27 124.0 67 83.6
Cfa004233 Carpinus fangiana HOM05D004401 ORTHO05D005169 8.5e-26 119.8 67 80.6
Haze_15165 Corylus avellana HOM05D004401 ORTHO05D005169 8.5e-26 119.8 67 80.6
Dinv39923 Davidia involucrata HOM05D004401 ORTHO05D005169 1.4e-25 119.0 67 83.6
MD15G1273200 Malus domestica HOM05D004401 ORTHO05D005169 1.4e-25 119.0 67 82.1
PGR102G2627 Punica granatum HOM05D004401 ORTHO05D005169 1.4e-25 119.0 67 80.6
Glyma.01G181200 Glycine max HOM05D004401 ORTHO05D005169 1.9e-25 118.6 67 83.6
Glyma.11G061000 Glycine max HOM05D004401 ORTHO05D005169 1.9e-25 118.6 67 83.6
Prupe.7G145400 Prunus persica HOM05D004401 ORTHO05D005169 1.9e-25 118.6 67 79.1
MD02G1158400 Malus domestica HOM05D004401 ORTHO05D005169 2.5e-25 118.2 67 80.6
Nn6g32163 Nelumbo nucifera HOM05D004401 ORTHO05D005169 2.5e-25 118.2 67 79.1
Hma1.2p1_0261F.1_g104910 Hydrangea macrophylla HOM05D004401 ORTHO05D005169 4.2e-25 117.5 67 79.1
TAR625G0432 Trochodendron aralioides HOM05D004401 ORTHO05D005169 4.2e-25 117.5 67 79.1
CSS0030032 Camellia sinensis var. sinensis HOM05D004401 ORTHO05D005169 5.5e-25 117.1 67 79.1
CSS0031085 Camellia sinensis var. sinensis HOM05D004401 ORTHO05D005169 5.5e-25 117.1 67 79.1
CAN.G836.19 Capsicum annuum HOM05D004401 ORTHO05D005169 5.5e-25 117.1 67 77.6
MELO3C020916.2 Cucumis melo HOM05D004401 ORTHO05D005169 5.5e-25 117.1 67 79.1
CsaV3_2G017130 Cucumis sativus L. HOM05D004401 ORTHO05D005169 5.5e-25 117.1 67 79.1
ClCG02G013050 Citrullus lanatus HOM05D004401 ORTHO05D005169 7.2e-25 116.7 67 79.1
Peaxi162Scf00535g00620 Petunia axillaris HOM05D004401 ORTHO05D005169 7.2e-25 116.7 67 77.6
RhsimUnG0212100 Rhododendron simsii HOM05D004401 ORTHO05D005169 7.2e-25 116.7 67 77.6
Actinidia12088 Actinidia chinensis HOM05D004401 ORTHO05D005169 9.4e-25 116.3 67 79.1
FvH4_1g14490 Fragaria vesca HOM05D004401 ORTHO05D005169 1.2e-24 115.9 67 79.1
FAN23G0479 Fragaria x ananassa HOM05D004401 ORTHO05D005169 1.2e-24 115.9 67 79.1
FAN26G1141 Fragaria x ananassa HOM05D004401 ORTHO05D005169 1.2e-24 115.9 67 79.1
Lj4A136G82 Lonicera japonica HOM05D004401 ORTHO05D005169 1.2e-24 115.9 69 78.3
Eucgr.H01940 Eucalyptus grandis HOM05D004401 ORTHO05D005169 1.6e-24 115.5 67 76.1
FAN19G2756 Fragaria x ananassa HOM05D004401 ORTHO05D005169 1.6e-24 115.5 67 79.1
MSTRG.15405 Avicennia marina HOM05D004401 ORTHO05D005169 2.7e-24 114.8 67 82.1
MBI16_g31340_MAGBIO Magnolia biondii HOM05D004401 ORTHO05D005169 2.7e-24 114.8 67 77.6
Rhsim08G0109400 Rhododendron simsii HOM05D004401 ORTHO05D005169 2.7e-24 114.8 67 77.6
TPR.G29860 Trifolium pratense HOM05D004401 ORTHO05D005169 2.7e-24 114.8 67 79.1
vmacro17880 Vaccinium macrocarpon HOM05D004401 ORTHO05D005169 2.7e-24 114.8 67 76.1
VMungo1215G0638 Vigna mungo HOM05D004401 ORTHO05D005169 2.7e-24 114.8 67 80.6
Cc07_g05390 Coffea canephora HOM05D004401 ORTHO05D005169 3.6e-24 114.4 67 82.1
Hma1.2p1_0739F.1_g211280 Hydrangea macrophylla HOM05D004401 ORTHO05D005169 3.6e-24 114.4 67 77.6
Medtr5g018600 Medicago truncatula HOM05D004401 ORTHO05D005169 3.6e-24 114.4 67 79.1
FAN28G2641 Fragaria x ananassa HOM05D004401 ORTHO05D005169 7.9e-24 113.2 67 77.6
vmacro05286 Vaccinium macrocarpon HOM05D004401 ORTHO05D005169 1.0e-23 112.8 67 76.1
Migut.K00842 Erythranthe guttata HOM05D004401 ORTHO05D005169 1.4e-23 112.5 67 76.1
Potri.007G034200 Populus trichocarpa HOM05D004401 ORTHO05D005169 1.4e-23 112.5 67 77.6
QL06p044258 Quercus lobata HOM05D004401 ORTHO05D005169 1.4e-23 112.5 67 74.6
TAR381G0351 Trochodendron aralioides HOM05D004401 ORTHO05D005169 1.4e-23 112.5 66 74.2
COL.COLO4_22179 Corchorus olitorius HOM05D004401 ORTHO05D005169 1.8e-23 112.1 66 78.8
ECA232G2743 Erigeron canadensis HOM05D004401 ORTHO05D005169 1.8e-23 112.1 69 81.2
Os07g0122400 Oryza sativa ssp. japonica HOM05D004401 ORTHO05D005169 1.8e-23 112.1 64 78.1
RcHm_v2.0_Chr2g0103241 Rosa chinensis HOM05D004401 ORTHO05D005169 1.8e-23 112.1 67 76.1
Potri.005G130800 Populus trichocarpa HOM05D004401 ORTHO05D005169 2.3e-23 111.7 66 78.8
PGSC0003DMG400010033 Solanum tuberosum HOM05D004401 ORTHO05D005169 2.3e-23 111.7 65 75.4
Thecc.01G045700 Theobroma cacao HOM05D004401 ORTHO05D005169 2.3e-23 111.7 66 78.8
arahy.Tifrunner.gnm1.ann1.6IB1GK Arachis hypogaea HOM05D004401 ORTHO05D005169 3.0e-23 111.3 67 79.1
CiPaw.01G029200 Carya illinoinensis HOM05D004401 ORTHO05D005169 3.0e-23 111.3 67 74.6
Ciclev10025507m.g Citrus clementina HOM05D004401 ORTHO05D005169 3.0e-23 111.3 67 74.6
Lj2g0012735 Lotus japonicus HOM05D004401 ORTHO05D005169 3.0e-23 111.3 67 77.6
Solyc02g090090.3 Solanum lycopersicum HOM05D004401 ORTHO05D005169 3.9e-23 110.9 65 75.4
Sopen02g034780 Solanum pennellii HOM05D004401 ORTHO05D005169 3.9e-23 110.9 65 75.4
Oeu020614.1 Olea europaea HOM05D004401 ORTHO05D005169 5.1e-23 110.5 67 76.1
PSO170G1133 Papaver somniferum HOM05D004401 ORTHO05D005169 5.1e-23 110.5 67 73.1
PSO700G0114 Papaver somniferum HOM05D004401 ORTHO05D005169 5.1e-23 110.5 67 73.1
Sabra07G0029800 Salix brachista HOM05D004401 ORTHO05D005169 5.1e-23 110.5 66 78.8
Hund14120 Selenicereus undatus HOM05D004401 ORTHO05D005169 5.1e-23 110.5 67 76.1
TWI73G0228 Tripterygium wilfordii HOM05D004401 ORTHO05D005169 5.1e-23 110.5 66 75.8
Aqoxy5G01748 Aquilegia oxysepala HOM05D004401 ORTHO05D005169 6.7e-23 110.2 67 74.6
Duzib264G0051 Durio zibethinus HOM05D004401 ORTHO05D005169 6.7e-23 110.2 66 75.8
Sabra05G0106100 Salix brachista HOM05D004401 ORTHO05D005169 6.7e-23 110.2 65 78.5
SalBow1G0657 Salvia bowleyana HOM05D004401 ORTHO05D005169 8.8e-23 109.8 67 74.6
SalBow1G3467 Salvia bowleyana HOM05D004401 ORTHO05D005169 8.8e-23 109.8 67 74.6
Ca_24810_v3 Cicer arietinum L. HOM05D004401 ORTHO05D005169 1.1e-22 109.4 67 73.1
Gohir.A02G161600 Gossypium hirsutum HOM05D004401 ORTHO05D005169 1.1e-22 109.4 66 77.3
Gohir.D03G018900 Gossypium hirsutum HOM05D004401 ORTHO05D005169 1.1e-22 109.4 66 77.3
Gorai.003G019300 Gossypium raimondii HOM05D004401 ORTHO05D005169 1.1e-22 109.4 66 77.3
Manes.13G132200 Manihot esculenta HOM05D004401 ORTHO05D005169 1.1e-22 109.4 66 71.2
Oeu023283.1 Olea europaea HOM05D004401 ORTHO05D005169 1.1e-22 109.4 67 74.6
THA.LOC104807569 Tarenaya hassleriana HOM05D004401 ORTHO05D005169 1.1e-22 109.4 66 77.3
CANSAT01G2530 Cannabis sativa HOM05D004401 ORTHO05D005169 1.5e-22 109.0 66 74.2
Glyma.06G250700 Glycine max HOM05D004401 ORTHO05D005169 1.5e-22 109.0 64 79.7
Lalb_Chr09g0322851 Lupinus albus HOM05D004401 ORTHO05D005169 1.5e-22 109.0 67 77.6
Nitab4.5_0000108g0170 Nicotiana tabacum HOM05D004401 ORTHO05D005169 1.5e-22 109.0 67 71.6
Nitab4.5_0005594g0020 Nicotiana tabacum HOM05D004401 ORTHO05D005169 1.5e-22 109.0 67 71.6
Ah.02g126040 Amaranthus hybridus HOM05D004401 ORTHO05D005169 2.6e-22 108.2 67 76.1
Lsat_1_v5_gn_4_177820 Lactuca sativa HOM05D004401 ORTHO05D005169 2.6e-22 108.2 69 75.4
Sed0006552 Sechium edule HOM05D004401 ORTHO05D005169 3.3e-22 107.8 67 73.1
Phvul.002G023700 Phaseolus vulgaris HOM05D004401 ORTHO05D005169 4.4e-22 107.5 62 80.6
A08p22480 Brassica napus HOM05D004401 ORTHO05D005169 5.7e-22 107.1 66 78.8
C03p79770 Brassica napus HOM05D004401 ORTHO05D005169 5.7e-22 107.1 66 78.8
Gohir.A11G045000 Gossypium hirsutum HOM05D004401 ORTHO05D005169 5.7e-22 107.1 65 75.4
Atru.chr3.472 Acer truncatum HOM05D004401 ORTHO05D005169 7.4e-22 106.7 67 70.1
Gorai.007G052100 Gossypium raimondii HOM05D004401 ORTHO05D005169 7.4e-22 106.7 65 75.4
EL10Ac6g14845 Beta vulgaris HOM05D004401 ORTHO05D005169 9.7e-22 106.3 67 74.6
Lalb_Chr05g0213081 Lupinus albus HOM05D004401 ORTHO05D005169 9.7e-22 106.3 67 76.1
AUR62003232 Chenopodium quinoa HOM05D004401 ORTHO05D005169 1.3e-21 105.9 67 73.1
AUR62027242 Chenopodium quinoa HOM05D004401 ORTHO05D005169 1.3e-21 105.9 67 73.1
HanXRQChr15g0489601 Helianthus annuus HOM05D004401 ORTHO05D005169 1.3e-21 105.9 69 75.4
BolC3t20224H Brassica oleracea HOM05D004401 ORTHO05D005169 1.7e-21 105.5 66 77.3
BraA08t34203Z Brassica rapa HOM05D004401 ORTHO05D005169 1.7e-21 105.5 66 77.3
unitig_0.g2308 Utricularia gibba HOM05D004401 ORTHO05D005169 1.7e-21 105.5 67 68.7
Gohir.D11G048500 Gossypium hirsutum HOM05D004401 ORTHO05D005169 2.8e-21 104.8 65 73.8
AT4G37210 Arabidopsis thaliana HOM05D004401 ORTHO05D005169 3.7e-21 104.4 66 74.2
CDE06G0525 Ceratophyllum demersum HOM05D004401 ORTHO05D005169 6.3e-21 103.6 65 72.3
HanXRQChr09g0264391 Helianthus annuus HOM05D004401 ORTHO05D005169 6.3e-21 103.6 69 71.0
AL7G14010 Arabidopsis lyrata HOM05D004401 ORTHO05D005169 8.2e-21 103.2 66 75.8
arahy.Tifrunner.gnm1.ann1.ZW82SR Arachis hypogaea HOM05D004401 ORTHO05D005169 1.1e-20 102.8 74 70.3
CARHR245290 Cardamine hirsuta HOM05D004401 ORTHO05D005169 1.1e-20 102.8 66 71.2
Duzib147G0010 Durio zibethinus HOM05D004401 ORTHO05D005169 1.1e-20 102.8 82 64.6
DCAR_025670 Daucus carota HOM05D004401 ORTHO05D005169 2.4e-20 101.7 67 68.7
SHI08724 Sapria himalayana HOM05D004401 ORTHO05D005169 2.4e-20 101.7 66 71.2
Thhalv10025057m.g Eutrema salsugineum HOM05D004401 ORTHO05D005169 3.1e-20 101.3 66 74.2
CDE04G2769 Ceratophyllum demersum HOM05D004401 ORTHO05D005169 5.3e-20 100.5 65 69.2
Carub.0007s0340 Capsella rubella HOM05D004401 ORTHO05D005169 6.9e-20 100.1 66 72.7
Aa31LG6G13770 Aethionema arabicum HOM05D004401 ORTHO05D005169 1.5e-19 99.0 66 71.2
HPP92_019643 Vanilla planifolia HOM05D004401 ORTHO05D005169 1.5e-19 99.0 64 68.8
Cpa.g.sc15.60 Carica papaya HOM05D004401 ORTHO05D005169 2.6e-19 98.2 67 70.1
Sp7g34580 Schrenkiella parvula HOM05D004401 ORTHO05D005169 3.4e-19 97.8 66 71.2
A01p02010 Brassica napus HOM05D004401 ORTHO05D005169 5.9e-19 97.1 67 73.1
BraA01t00189Z Brassica rapa HOM05D004401 ORTHO05D005169 5.9e-19 97.1 67 73.1
C01p02190 Brassica napus HOM05D004401 ORTHO05D005169 7.7e-19 96.7 67 73.1
BolC1t00211H Brassica oleracea HOM05D004401 ORTHO05D005169 7.7e-19 96.7 67 73.1
Zm00001eb117930 Zea mays HOM05D004401 ORTHO05D005169 7.7e-19 96.7 64 65.6
ATR0733G114 Amborella trichopoda HOM05D004401 ORTHO05D005169 5.5e-17 90.5 69 65.2
Lsat_1_v5_gn_1_2961 Lactuca sativa HOM05D004401 ORTHO05D005169 5.5e-17 90.5 67 61.2
Gohir.A11G188200 Gossypium hirsutum HOM05D004401 ORTHO05D005169 1.6e-16 89.0 66 63.6
Gorai.007G208200 Gossypium raimondii HOM05D004401 ORTHO05D005169 3.6e-16 87.8 66 63.6
Gohir.D11G194700 Gossypium hirsutum HOM05D004401 ORTHO05D005169 3.9e-15 84.3 66 62.1
Mapoly0080s0039 Marchantia polymorpha HOM05D004401 ORTHO05D005169 3.3e-14 81.3 57 63.2
Sc03g0001200 Simmondsia chinensis HOM05D004401 ORTHO05D005169 3.7e-13 77.8 41 82.9
Sc07g0000180 Simmondsia chinensis HOM05D004401 ORTHO05D005169 3.7e-13 77.8 63 55.6
AagrBONN_evm.TU.Sc2ySwM_228.4759 Anthoceros agrestis HOM05D004401 ORTHO05D005169 4.8e-13 77.4 59 59.3
Pp3c24_5960 Physcomitrium patens HOM05D004401 ORTHO05D005169 1.4e-12 75.9 59 59.3
Sed0017517 Sechium edule HOM05D004401 ORTHO05D005169 3.5e-11 71.2 46 69.6
Ah.03g142140 Amaranthus hybridus HOM05D004401 ORTHO05D005169 7.7e-11 70.1 141 34.8
SMO358G0116 Selaginella moellendorffii HOM05D004401 ORTHO05D005169 1.9e-09 65.5 57 54.4
CBR_g26200 Chara braunii HOM05D004401 ORTHO05D005169 8.0e-08 60.1 58 51.7
SEGI_23846 Sequoiadendron giganteum HOM05D004401 ORTHO05D005169 3.0e-07 58.2 59 49.2
Psat0s4627g0120 Pisum sativum HOM05D004401 ORTHO05D005169 1.2e-06 56.2 35 74.3
MCO16G464 Micromonas commoda HOM05D004401 ORTHO05D005169 2.6e-06 55.1 55 43.6


User provided reference genes

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