Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.2e-180 636.3 310 100.0
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 5.9e-87 325.1 273 58.2
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 1.2e-84 317.4 291 56.0
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 3.1e-80 302.8 274 55.1
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 2.0e-79 300.1 290 55.2
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 1.0e-78 297.7 264 56.8
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 2.3e-75 286.6 273 54.9
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 4.0e-75 285.8 274 52.9
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 8.8e-75 284.6 273 53.1
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 8.8e-75 284.6 270 54.8
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 1.2e-74 284.3 274 52.9
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 2.6e-74 283.1 273 52.7
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 3.7e-73 279.3 276 54.7
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 8.2e-73 278.1 274 51.8
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 4.1e-72 275.8 272 50.7
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 5.0e-70 268.9 282 49.6
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 1.1e-69 267.7 270 51.1
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 7.2e-69 265.0 270 50.7
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 2.3e-67 260.0 272 51.5
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 5.2e-67 258.8 271 50.2
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 2.0e-66 256.9 277 50.2
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 4.4e-66 255.8 273 48.4
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 5.7e-66 255.4 276 50.0
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 9.8e-66 254.6 279 47.0
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 3.7e-65 252.7 277 47.3
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 1.6e-63 247.3 270 48.1
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 8.6e-62 241.5 281 48.0
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 1.5e-61 240.7 273 47.6
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 5.5e-61 238.8 201 56.7
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 9.5e-61 238.0 273 46.9
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.2e-60 237.7 275 47.3
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 2.1e-60 236.9 273 45.1
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 2.8e-60 236.5 275 47.3
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 3.6e-60 236.1 246 48.8
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 6.3e-57 225.3 273 42.9
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 2.4e-56 223.4 303 43.6
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 3.1e-56 223.0 265 47.2
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 4.1e-56 222.6 273 45.4
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 4.1e-56 222.6 283 46.3
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 4.1e-56 222.6 263 47.5
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 1.2e-55 221.1 278 43.9
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 5.0e-54 215.7 274 43.4
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 1.2e-52 211.1 277 45.5
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 1.2e-52 211.1 277 44.8
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 1.2e-52 211.1 277 43.0
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 6.1e-52 208.8 270 42.2
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 1.4e-51 207.6 174 57.5
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 1.8e-51 207.2 279 41.9
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 1.2e-50 204.5 274 41.6
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 1.5e-50 204.1 206 51.9
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 2.0e-50 203.8 345 36.8
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 1.8e-48 197.2 280 40.7
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 1.8e-48 197.2 275 43.3
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 3.2e-48 196.4 279 40.9
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 3.2e-48 196.4 279 40.9
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 5.4e-48 195.7 230 43.9
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.2e-47 194.5 265 42.3
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 1.6e-47 194.1 300 36.7
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 2.0e-47 193.7 279 40.5
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 6.0e-47 192.2 280 40.0
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 6.0e-47 192.2 284 40.5
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 7.8e-47 191.8 291 40.2
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 1.3e-46 191.0 275 38.9
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 1.7e-46 190.7 279 38.7
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 6.6e-46 188.7 280 41.8
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 6.2e-44 182.2 261 39.5
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 1.1e-43 181.4 212 45.3
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 3.1e-43 179.9 182 51.1
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 5.2e-43 179.1 275 38.2
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 6.8e-43 178.7 182 50.0
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 4.6e-39 166.0 174 47.1
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 1.7e-38 164.1 204 43.1
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 3.6e-36 156.4 183 46.4
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 8.1e-36 155.2 296 36.5
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 2.9e-33 146.7 273 38.1
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 1.1e-32 144.8 238 36.6
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 5.4e-32 142.5 214 43.9
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 7.8e-31 138.7 280 36.8
MD02G1010000 Malus domestica HOM05D003067 ORTHO05D009378 1.8e-27 127.5 94 63.8
GSVIVG01003739001 Vitis vinifera HOM05D003067 ORTHO05D009378 3.8e-25 119.8 62 95.2
Glyma.15G205500 Glycine max HOM05D003067 ORTHO05D009378 2.8e-20 103.6 121 43.8
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 1.5e-18 97.8 266 28.6
Nitab4.5_0001478g0160 Nicotiana tabacum HOM05D003067 ORTHO05D009378 8.4e-17 92.0 184 35.3
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 1.9e-16 90.9 192 31.2
Mapoly0029s0107 Marchantia polymorpha HOM05D001297 ORTHO05D001135 1.9e-13 80.9 266 27.8
Nitab4.5_0000525g0300 Nicotiana tabacum HOM05D003067 ORTHO05D009378 2.8e-12 77.0 202 31.2
CSS0014498 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D009378 1.4e-11 74.7 83 43.4
AL2G22600 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 2.6e-10 70.5 101 36.6
Aa31LG2G19330 Aethionema arabicum HOM05D003067 ORTHO05D009378 3.4e-10 70.1 117 34.2
AL6G46700 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 7.6e-10 68.9 101 36.6


User provided reference genes

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