Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 7.1e-130 467.2 229 100.0
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 1.8e-48 196.8 142 69.0
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 2.3e-48 196.4 142 69.7
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 4.0e-48 195.7 147 72.1
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 4.0e-48 195.7 144 70.1
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 1.5e-47 193.7 142 69.0
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 1.5e-47 193.7 142 69.7
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 2.0e-47 193.4 144 69.4
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 2.6e-47 193.0 144 70.8
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 5.7e-47 191.8 148 68.2
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 6.3e-46 188.3 176 61.4
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 8.3e-46 188.0 138 71.7
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 3.2e-45 186.0 146 68.5
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 3.2e-45 186.0 176 60.8
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 4.1e-45 185.7 146 65.1
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 4.1e-45 185.7 140 68.6
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 7.0e-45 184.9 146 67.8
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 1.2e-44 184.1 146 67.8
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 2.0e-44 183.3 148 68.2
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 3.5e-44 182.6 144 64.6
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 4.5e-44 182.2 140 70.0
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 7.8e-44 181.4 142 67.6
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 6.6e-43 178.3 143 66.4
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 1.5e-42 177.2 132 72.0
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 5.6e-42 175.3 146 65.8
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 1.6e-41 173.7 136 68.4
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 1.6e-41 173.7 148 64.9
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 2.1e-41 173.3 145 63.4
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 3.6e-41 172.6 144 63.9
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 3.6e-41 172.6 144 63.9
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 4.7e-41 172.2 144 66.0
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 8.0e-41 171.4 145 63.4
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.0e-40 171.0 144 63.2
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 1.8e-40 170.2 144 62.5
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 5.2e-40 168.7 147 63.3
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 1.2e-39 167.5 151 64.2
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 2.6e-39 166.4 146 64.4
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 5.8e-39 165.2 143 63.6
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 7.5e-39 164.9 110 76.4
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 7.5e-39 164.9 142 60.6
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 7.5e-39 164.9 145 63.4
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 7.5e-39 164.9 141 66.0
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 1.3e-38 164.1 150 60.0
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 1.3e-38 164.1 144 60.4
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 1.7e-38 163.7 153 60.8
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 2.9e-38 162.9 146 61.6
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 2.9e-38 162.9 146 61.6
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 1.1e-37 161.0 103 76.7
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 1.4e-37 160.6 153 58.8
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 2.4e-37 159.8 146 60.3
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 4.1e-37 159.1 86 88.4
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 5.4e-37 158.7 91 82.4
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 5.4e-37 158.7 91 82.4
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 7.0e-37 158.3 104 74.0
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 7.0e-37 158.3 120 71.7
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 9.2e-37 157.9 109 71.6
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 1.2e-36 157.5 92 80.4
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 1.2e-36 157.5 147 62.6
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 1.6e-36 157.1 131 61.8
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 2.0e-36 156.8 104 74.0
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 6.0e-36 155.2 110 71.8
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 6.0e-36 155.2 110 71.8
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 6.0e-36 155.2 110 71.8
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 6.0e-36 155.2 110 71.8
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 6.0e-36 155.2 110 71.8
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 1.3e-35 154.1 110 71.8
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 1.3e-35 154.1 102 74.5
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 1.7e-35 153.7 108 71.3
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 1.7e-35 153.7 104 73.1
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 1.7e-35 153.7 84 86.9
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 1.7e-35 153.7 112 69.6
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 1.7e-35 153.7 179 53.1
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 3.9e-35 152.5 133 57.9
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 3.9e-35 152.5 101 75.2
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 3.9e-35 152.5 103 75.7
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 3.9e-35 152.5 146 59.6
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 5.0e-35 152.1 102 75.5
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.1e-34 151.0 117 66.7
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 1.5e-34 150.6 95 78.9
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 2.5e-34 149.8 87 81.6
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 2.5e-34 149.8 103 72.8
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 2.5e-34 149.8 156 57.1
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 3.3e-34 149.4 148 56.8
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 3.3e-34 149.4 148 56.8
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 4.3e-34 149.1 135 55.6
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 5.6e-34 148.7 110 70.0
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 1.4e-32 144.1 142 57.7
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 1.4e-32 144.1 83 85.5
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 3.1e-32 142.9 99 66.7
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 5.2e-32 142.1 82 82.9
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 9.8e-31 137.9 84 79.8
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 1.1e-29 134.4 74 85.1
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 1.4e-29 134.0 168 51.2
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 6.0e-28 128.6 71 85.9
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 1.0e-27 127.9 117 57.3
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 3.9e-27 125.9 100 63.0
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 8.6e-27 124.8 104 66.3
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 1.2e-25 120.9 76 71.1
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 1.2e-23 114.4 154 44.8
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 1.7e-22 110.5 79 68.4
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 1.1e-21 107.8 86 61.6
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 3.0e-19 99.8 68 75.0
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.9e-18 97.1 52 84.6
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 3.3e-18 96.3 123 51.2
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 2.9e-14 83.2 77 61.0
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 4.9e-06 55.8 56 55.4


User provided reference genes

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