Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003576001 Vitis vinifera HOM05D013764 ORTHO05D014120 2.4e-54 215.3 111 100.0
GSVIVG01034319001 Vitis vinifera HOM05D013764 ORTHO05D014120 3.4e-53 211.5 111 98.2
GSVIVG01034310001 Vitis vinifera HOM05D013764 ORTHO05D014120 4.4e-53 211.1 111 98.2
GSVIVG01001885001 Vitis vinifera HOM05D013764 ORTHO05D014120 1.7e-52 209.1 111 97.3
GSVIVG01000678001 Vitis vinifera HOM05D013764 ORTHO05D014120 4.9e-52 207.6 111 96.4
GSVIVG01001876001 Vitis vinifera HOM05D013764 ORTHO05D014120 4.9e-52 207.6 111 96.4
GSVIVG01003584001 Vitis vinifera HOM05D013764 ORTHO05D014120 1.9e-51 205.7 111 95.5
GSVIVG01003891001 Vitis vinifera HOM05D013764 ORTHO05D014120 1.6e-50 202.6 111 93.7
GSVIVG01006054001 Vitis vinifera HOM05D013764 ORTHO05D014120 3.4e-21 105.1 57 96.5
GSVIVG01006348001 Vitis vinifera HOM05D013764 ORTHO05D014120 3.4e-21 105.1 57 96.5
GSVIVG01026688001 Vitis vinifera HOM05D013764 ORTHO05D014120 1.3e-15 86.7 46 95.7
GSVIVG01033598001 Vitis vinifera HOM05D004602 ORTHO05D005906 1.7e-12 76.3 69 63.8
Dinv08512 Davidia involucrata HOM05D004602 ORTHO05D005906 1.4e-11 73.2 63 58.7
Gohir.A11G308300 Gossypium hirsutum HOM05D004602 ORTHO05D005906 1.9e-11 72.8 69 55.1
Gohir.D11G323700 Gossypium hirsutum HOM05D004602 ORTHO05D005906 5.5e-11 71.2 68 54.4
Gorai.007G353800 Gossypium raimondii HOM05D004602 ORTHO05D005906 5.5e-11 71.2 68 54.4
Duzib106G0250 Durio zibethinus HOM05D004602 ORTHO05D005906 1.2e-10 70.1 62 62.9
Thecc.05G139800 Theobroma cacao HOM05D004602 ORTHO05D005906 1.2e-10 70.1 62 58.1
TAR636G3632 Trochodendron aralioides HOM05D004602 ORTHO05D005906 7.9e-10 67.4 60 60.0
COL.COLO4_37953 Corchorus olitorius HOM05D004602 ORTHO05D005906 3.9e-09 65.1 62 54.8
RcHm_v2.0_Chr2g0125151 Rosa chinensis HOM05D004602 ORTHO05D005906 6.7e-09 64.3 61 55.7
vmacro09030 Vaccinium macrocarpon HOM05D004602 ORTHO05D005906 8.8e-09 63.9 62 59.7
COL.COLO4_37951 Corchorus olitorius HOM05D004602 ORTHO05D005906 1.1e-08 63.5 77 45.5
Haze_19715 Corylus avellana HOM05D004602 ORTHO05D005906 1.1e-08 63.5 61 62.3
MBI13_g01621_MAGBIO Magnolia biondii HOM05D004602 ORTHO05D005906 1.1e-08 63.5 61 60.7
TWI53G0771 Tripterygium wilfordii HOM05D004602 ORTHO05D005906 1.1e-08 63.5 60 60.0
arahy.Tifrunner.gnm1.ann1.0AC10P Arachis hypogaea HOM05D004602 ORTHO05D005906 1.5e-08 63.2 66 57.6
FvH4_6g25220 Fragaria vesca HOM05D004602 ORTHO05D005906 1.5e-08 63.2 67 53.7
FAN05G3456 Fragaria x ananassa HOM05D004602 ORTHO05D014120 1.5e-08 63.2 67 53.7
Potri.006G041500 Populus trichocarpa HOM05D004602 ORTHO05D005906 1.5e-08 63.2 60 56.7
CSS0046388 Camellia sinensis var. sinensis HOM05D004602 ORTHO05D005906 1.9e-08 62.8 60 60.0
FAN09G3373 Fragaria x ananassa HOM05D004602 ORTHO05D005906 1.9e-08 62.8 67 53.7
arahy.Tifrunner.gnm1.ann1.F5KNV4 Arachis hypogaea HOM05D004602 ORTHO05D005906 2.5e-08 62.4 66 57.6
Lj1A1104G73 Lonicera japonica HOM05D004602 ORTHO05D005906 3.3e-08 62.0 56 55.4
Lalb_Chr06g0173601 Lupinus albus HOM05D004602 ORTHO05D014120 3.3e-08 62.0 53 66.0
MD14G1099800 Malus domestica HOM05D004602 ORTHO05D005906 3.3e-08 62.0 62 53.2
Nitab4.5_0001364g0050 Nicotiana tabacum HOM05D004602 ORTHO05D005906 4.3e-08 61.6 60 53.3
Sabra06G0028200 Salix brachista HOM05D004602 ORTHO05D005906 4.3e-08 61.6 60 56.7
Phvul.007G247800 Phaseolus vulgaris HOM05D004602 ORTHO05D005906 5.7e-08 61.2 82 47.6
Atru.chr1.1489 Acer truncatum HOM05D004602 ORTHO05D005906 7.4e-08 60.8 60 51.7
CSS0013313 Camellia sinensis var. sinensis HOM05D004602 ORTHO05D005906 7.4e-08 60.8 59 59.3
Glyma.02G157700 Glycine max HOM05D004602 ORTHO05D005906 7.4e-08 60.8 69 53.6
Prupe.7G042500 Prunus persica HOM05D004602 ORTHO05D005906 7.4e-08 60.8 60 51.7
Sc19g0008270 Simmondsia chinensis HOM05D004602 ORTHO05D005906 7.4e-08 60.8 57 54.4
TPR.G19659 Trifolium pratense HOM05D004602 ORTHO05D005906 7.4e-08 60.8 71 52.1
CAN.G641.74 Capsicum annuum HOM05D004602 ORTHO05D005906 9.7e-08 60.5 60 53.3
FAN14G4483 Fragaria x ananassa HOM05D004602 ORTHO05D005906 9.7e-08 60.5 67 52.2
Nn2g14888 Nelumbo nucifera HOM05D004602 ORTHO05D005906 9.7e-08 60.5 83 47.0
PSO339G0660 Papaver somniferum HOM05D004602 ORTHO05D005906 9.7e-08 60.5 68 54.4
PSO384G2446 Papaver somniferum HOM05D004602 ORTHO05D005906 9.7e-08 60.5 68 54.4
Sed0020412 Sechium edule HOM05D004602 ORTHO05D005906 9.7e-08 60.5 60 55.0
Lj5g0012838 Lotus japonicus HOM05D004602 ORTHO05D005906 1.3e-07 60.1 61 59.0
Medtr1g051230 Medicago truncatula HOM05D004602 ORTHO05D005906 1.3e-07 60.1 66 53.0
Nitab4.5_0000571g0090 Nicotiana tabacum HOM05D004602 ORTHO05D005906 1.3e-07 60.1 60 51.7
Ca_26637_v3 Cicer arietinum L. HOM05D004602 ORTHO05D005906 1.7e-07 59.7 69 53.6
Sopen10g030360 Solanum pennellii HOM05D004602 ORTHO05D005906 1.7e-07 59.7 60 55.0
PGSC0003DMG400029835 Solanum tuberosum HOM05D004602 ORTHO05D005906 1.7e-07 59.7 60 53.3
QL07p008767 Quercus lobata HOM05D004602 ORTHO05D005906 2.2e-07 59.3 57 56.1
Lalb_Chr02g0156531 Lupinus albus HOM05D004602 ORTHO05D005906 2.8e-07 58.9 65 53.8
SalBow8G3517 Salvia bowleyana HOM05D004602 ORTHO05D005906 2.8e-07 58.9 61 45.9
SalBow8G5198 Salvia bowleyana HOM05D004602 ORTHO05D005906 2.8e-07 58.9 61 45.9
Solyc10g079730.3 Solanum lycopersicum HOM05D004602 ORTHO05D005906 3.7e-07 58.5 60 53.3
Hund24628 Selenicereus undatus HOM05D004602 ORTHO05D005906 4.8e-07 58.2 67 53.7
Oeu029496.3 Olea europaea HOM05D004602 ORTHO05D005906 6.3e-07 57.8 60 51.7
Psat6g123240 Pisum sativum HOM05D004602 ORTHO05D005906 6.3e-07 57.8 59 57.6
MSTRG.19816 Avicennia marina HOM05D004602 ORTHO05D005906 1.1e-06 57.0 60 50.0
Rhsim04G0110600 Rhododendron simsii HOM05D004602 ORTHO05D005906 1.1e-06 57.0 58 56.9
PGSC0003DMG400004177 Solanum tuberosum HOM05D002370 ORTHO05D003878 1.1e-06 57.0 75 45.3
Actinidia38152 Actinidia chinensis HOM05D004602 ORTHO05D005906 1.4e-06 56.6 60 56.7
EL10Ac3g07209 Beta vulgaris HOM05D004602 ORTHO05D005906 1.4e-06 56.6 70 47.1
VMungo0720G1740 Vigna mungo HOM05D004602 ORTHO05D005906 1.4e-06 56.6 67 50.7
CiPaw.09G045900 Carya illinoinensis HOM05D004602 ORTHO05D005906 1.8e-06 56.2 67 50.7
Cpa.g.sc5.207 Carica papaya HOM05D004602 ORTHO05D005906 3.1e-06 55.5 60 51.7
Peaxi162Scf00970g00168 Petunia axillaris HOM05D004602 ORTHO05D005906 3.1e-06 55.5 66 50.0
Aqoxy2G00344 Aquilegia oxysepala HOM05D004602 ORTHO05D005906 4.1e-06 55.1 44 65.9
CANSAT56G2079 Cannabis sativa HOM05D004602 ORTHO05D005906 5.3e-06 54.7 67 47.8
Eucgr.A02262 Eucalyptus grandis HOM05D004602 ORTHO05D005906 5.3e-06 54.7 60 51.7
AUR62040826 Chenopodium quinoa HOM05D004602 ORTHO05D005906 6.9e-06 54.3 60 46.7
SGA_v2.0_scaffold105G30304 Striga asiatica HOM05D004602 ORTHO05D005906 6.9e-06 54.3 61 49.2
PGR031G1006 Punica granatum HOM05D004602 ORTHO05D005906 9.1e-06 53.9 60 50.0


User provided reference genes

Program Settings